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CryptoDB: a Cryptosporidium bioinformatics resource update

Abstract
The database, CryptoDB (), is a community bioinformatics resource for the AIDS-related apicomplexan-parasite, Cryptosporidium. CryptoDB integrates whole genome sequence and annotation with expressed sequence tag and genome survey sequence data and provides supplemental bioinformatics analyses and data-mining tools. A simple, yet comprehensive web interface is available for mining and visualizing the data. CryptoDB is allied with the databases PlasmoDB and ToxoDB via ApiDB, an NIH/NIAID-fundedBioinformatics Resource Center. Recent updates to CryptoDB include the deposition of annotated genome sequences for Cryptosporidium parvum and Cryptosporidium hominis, migration to a relational database (GUS), a new query and visualization interface and the introduction of Web services.

Publication details
Download http://www.pubmedcentral.gov/articlerender.fcgi?artid=1347441
Publisher Oxford University Press
Repository PubMed Central (PMC3 - NLM DTD) (United States)
Keywords Article
Type Text
Language Englisch