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Hawkeye: an interactive visual analytics tool for genome assemblies (2007)

Abstract
Genome sequencing remains an inexact science, and genome sequences can contain significant errors if they are not carefully examined. Hawkeye is our new visual analytics tool for genome assemblies, designed to aid in identifying and correcting assembly errors. Users can analyze all levels of an assembly along with summary statistics and assembly metrics, and are guided by a ranking component towards likely mis-assemblies. Hawkeye is freely available and released as part of the open source AMOS project http://amos.sourceforge.net/hawkeye.

Publication details
Download http://hdl.handle.net/1903/7994
Publisher Genome Biology
Repository Digital Repository at the University of Maryland (United States)
Keywords genome sequencing, Hawkeye, genome assembly, AMOS
Type Article
Language English
Relation College of Computer, Mathematical & Physical Sciences, Computer Science, Digital Repository at the University of Maryland, University of Maryland (College Park, MD)