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Functional Grouping of Genes Using Spectral Clustering And Gene Ontology (2005)

Abstract
With the invention of high throughput methods, researchers are capable of producing large amounts of biological data. During the analysis of such data the need for a functional grouping of genes arises. In this paper, we propose a new method based on spectral clustering for the partitioning of genes according to their biological function. The functional information is based on Gene Ontology annotation, a mechanism to capture functional knowledge in a shareable and computer processable form. Our functional cluster method promises to automatize, speed up and therefore improve biological data analysis.

Publication details
Download http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.59.5465
Source http://www-ra.informatik.uni-tuebingen.de/publikationen/2005/speer05-ijcnn.pdf
Publisher IEEE Press
Contributors CiteSeerX
Repository CiteSeerX - Scientific Literature Digital Library and Search Engine (United States)
Type text
Language English
Relation 10.1.1.11.2062, 10.1.1.19.8100, 10.1.1.55.5277, 10.1.1.29.2985, 10.1.1.19.9246, 10.1.1.16.6664, 10.1.1.1.2769, 10.1.1.1.6448