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ORIOGEN: order restricted inference for ordered gene expression data (2005)

Abstract
Summary: ORIOGEN is a user-friendly Java-based software package for selecting and clustering genes according to their profiles across various treatment groups. In particular, ORIOGEN is useful for analyzing data obtained from time-course or dose–response type experiments. Availability: The ORIOGEN software can be downloaded freely from http://dir.niehs.nih.gov/dirbb/oriogen/index.cfm Contact: peddada@niehs.nih.gov (for statistical questions) and oriogen@constellagroup.com (for software support) Supplementary information: ORIOGEN has a full set of help files. Also, an example input file is provided with the download.

Publication details
Download http://bioinformatics.oxfordjournals.org/cgi/content/short/21/20/3933
http://dx.doi.org/10.1093/bioinformatics/bti637
Publisher Oxford University Press
Repository HighWire Press OAI Repository (United States)
Keywords GENE EXPRESSION
Type TEXT
Language English