Implementing Protein Seed-Based Comparison Algorithm on the SGI RASC-100 Platform (2009)
Nguyen, Van Hoa, Cornu, Alexandre, Lavenier, Dominique
This paper describes a parallel FPGA implementation of a genomic sequence comparison algorithm for finding similarities between a large set of protein sequences and full genomes. Results comparable...
Implementing Protein Seed-Based Comparison Algorithm on the SGI RASC-100 Platform (2009)
Nguyen, Van Hoa, Cornu, Alexandre, Lavenier, Dominique
This paper describes a parallel FPGA implementation of a genomic sequence comparison algorithm for finding similarities between a large set of protein sequences and full genomes. Results comparable...
Cornu, Alexandre, Dussaugey, Francois, Lavenier, Dominique
This document describes a parallel genomic sequence comparison operator for reconfigurable platforms. It has been implemented for speeding up the time consuming parts of the IRISA-TBLASTN program...
Cornu, Alexandre, Dussaugey, Francois, Lavenier, Dominique
This document describes a parallel genomic sequence comparison operator for reconfigurable platforms. It has been implemented for speeding up the time consuming parts of the IRISA-TBLASTN program...