Nakamichi, Norihito, Kusano, Miyako, Fukushima, Atsushi, Kita, Masanori, Ito, Shogo, Yamashino, Takafumi, ...
Arabidopsis PSEUDO RESPONSE REGULATOR (PRR) genes are components of the circadian clock mechanism. In order to understand the scope of genome-wide transcriptional regulation by PRR genes, a...
PRIME: Platform for RIKEN Metabolomics (2008)
Atsushi Fukushima, Miyako Kusano, Kenji Akiyama, Takeshi Obayashi, Shigehiko Kanaya, ...
Although Arabidopsis thaliana is the most widely studied model plant, functions of those genes and the structure of gene-to-metabolite networks are largely unknown. As an approach complementary to...
Hirokazu Nishio, Atsushi Fukushima, Toshimichi Ikemura, Hirotada Mori, Taku Oshima, ...
Keywords: Fourth-isometric projection, replication origin and terminus, visualization of genome 1
SVD-based Anatomy of Gene Expressions for Correlation Analysis in Arabidopsis thaliana (2008)
Fukushima, Atsushi, Wada, Masayoshi, Kanaya, Shigehiko, Arita, Masanori
Gene co-expression analysis has been widely used in recent years for predicting unknown gene function and its regulatory mechanisms. The predictive accuracy depends on the quality and the diversity...
Kusano, Miyako, Fukushima, Atsushi, Arita, Masanori, Jonsson, Pär, Moritz, Thomas, Kobayashi, Makoto, ...
Abstract Background Metabolites are not only the catalytic products of enzymatic reactions but also the active regulators or the ultimate phenotype of metabolic homeostasis in highly complex cellular...
Periodicity in genome architecture from bacteria to human (2003)
http://library.naist.jp/mylimedio/dllimedio/show.cgi?bookid=78423
BodyMap: A Collection of 3' ESTs for Analysis of Human Gene Expression Information (2000)
Kawamoto, Shoko, Yoshii, Junji, Mizuno, Katsuya, Ito, Kouichi, Miyamoto, Yasuhide, Ohnishi, Tadashi, ...
Chromosomal Assignments of Novel Genes Expressed in HL60 Granulocytes (1994)
Fukushima, Atsushi, Matsubara, Kenichi, Murakawa, Katsuji, Yoshii, Junji, Yokoyama, Masahiro, Okubo, Kousaku
By collecting 3′-directed cDNA sequences called gene signatures (GSs) on a large scale, it is possible to make an expression profile of genes in a particular tissue, as well as discovering a number...
BodyMap: A Collection of 3′ ESTs for Analysis of Human Gene Expression Information
Kawamoto, Shoko, Yoshii, Junji, Mizuno, Katsuya, Ito, Kouichi, Miyamoto, Yasuhide, Ohnishi, Tadashi, ...
BodyMap is a collection of site-directed 3′ expressed sequence tags (ESTs) (gene signatures, GSs) that contains the transcript compositions of various human tissues and was the first systematic...
BodyMap: A Collection of 3′ ESTs for Analysis of Human Gene Expression Information
Kawamoto, Shoko, Yoshii, Junji, Mizuno, Katsuya, Ito, Kouichi, Miyamoto, Yasuhide, Ohnishi, Tadashi, ...
BodyMap is a collection of site-directed 3′ expressed sequence tags (ESTs) (gene signatures, GSs) that contains the transcript compositions of various human tissues and was the first systematic...
Kusano, Miyako, Fukushima, Atsushi, Arita, Masanori, Jonsson, Pär, Moritz, Thomas, Kobayashi, Makoto, ...
Physiological Roles of the β-Substituted Alanine Synthase Gene Family in Arabidopsis1[W][OA]
Watanabe, Mutsumi, Kusano, Miyako, Oikawa, Akira, Fukushima, Atsushi, Noji, Masaaki, Saito, Kazuki
The β-substituted alanine (Ala) synthase (Bsas) family in the large superfamily of pyridoxal 5′-phosphate-dependent enzymes comprises cysteine (Cys) synthase (CSase) [O-acetyl-serine (thiol)...
SVD-based Anatomy of Gene Expressions for Correlation Analysis in Arabidopsis thaliana
Fukushima, Atsushi, Wada, Masayoshi, Kanaya, Shigehiko, Arita, Masanori
Gene co-expression analysis has been widely used in recent years for predicting unknown gene function and its regulatory mechanisms. The predictive accuracy depends on the quality and the diversity...
Impact of clock-associated Arabidopsis pseudo-response regulators in metabolic coordination
Fukushima, Atsushi, Kusano, Miyako, Nakamichi, Norihito, Kobayashi, Makoto, Hayashi, Naomi, Sakakibara, Hitoshi, ...
In higher plants, the circadian clock controls a wide range of cellular processes such as photosynthesis and stress responses. Understanding metabolic changes in arrhythmic plants and determining...