arrayQualityMetrics--a bioconductor package for quality assessment of microarray data (2009)
Kauffmann, Audrey, Gentleman, Robert, Huber, Wolfgang
Summary:: The assessment of data quality is a major concern in microarray analysis. arrayQualityMetrics is a Bioconductor package that provides a report with diagnostic plots for one or two colour...
Importing ArrayExpress datasets into R/Bioconductor (2009)
Kauffmann, Audrey, Rayner, Tim F., Parkinson, Helen, Kapushesky, Misha, Lukk, Margus, Brazma, Alvis, ...
Summary:ArrayExpress is one of the largest public repositories of microarray datasets. R/Bioconductor provides a comprehensive suite of microarray analysis and integrative bioinformatics software....
Abouzahr, Soraya, Bismuth, Georges, Gaudin, Catherine, Caroll, Oliver, Van Endert, Peter, Jalil, Abdelali, ...
To investigate tumor resistance to T cell lysis, a resistant variant was selected after specific cytolytic T lymphocytes (CTL) selection pressure. Although the resistant variant triggered perforin...
Abouzahr, Soraya, Bismuth, Georges, Gaudin, Catherine, Caroll, Oliver, Van Endert, Peter, Jalil, Abdelali, ...
To investigate tumor resistance to T cell lysis, a resistant variant was selected after specific cytolytic T lymphocytes (CTL) selection pressure. Although the resistant variant triggered perforin...
Apoptosis regulation in tetraploid cancer cells
Castedo, Maria, Coquelle, Arnaud, Vivet, Sonia, Vitale, Ilio, Kauffmann, Audrey, Dessen, Philippe, ...
Tetraploidy can result in cancer-associated aneuploidy. As shown here, freshly generated tetraploid cells arising due to mitotic slippage or failed cytokinesis are prone to undergo Bax-dependent...
arrayQualityMetrics—a bioconductor package for quality assessment of microarray data
Kauffmann, Audrey, Gentleman, Robert, Huber, Wolfgang
Summary:: The assessment of data quality is a major concern in microarray analysis. arrayQualityMetrics is a Bioconductor package that provides a report with diagnostic plots for one or two colour...
Importing ArrayExpress datasets into R/Bioconductor
Kauffmann, Audrey, Rayner, Tim F., Parkinson, Helen, Kapushesky, Misha, Lukk, Margus, Brazma, Alvis, ...
Summary:ArrayExpress is one of the largest public repositories of microarray datasets. R/Bioconductor provides a comprehensive suite of microarray analysis and integrative bioinformatics software....