Bellerophon: Graph analysis for improved EST clustering (2008)
Jérémy Just, Emmanuel Barillot, Fabrice Legeai, Aymeric Duclert
Bellerophon is a set of Perl modules and application scripts that aims to improve the quality of EST clusters. Graph theory algorithms are applied to pairwise alignments to pinpoint putative chimeric...
ADEL: Analysis of the Distribution of ESTs in cDNA Libraries (2007)
Jean-baptiste Veyrieras, Sophie Crno, Fabrice Legeai, Emmanuel Barillot, Aymeric Duclert
ADEL is a web-based tool allowing statistical analysis of gene expression using expressed sequence tags (ESTs) from cDNA libraries. It implements several statistical methods described in the...
Bellerophon: Graph analysis for improved EST clustering (2007)
Jrmy Just, Emmanuel Barillot, Fabrice Legeai, Aymeric Duclert
Bellerophon is a set of Perl modules and application scripts that aims to improve the quality of EST clusters. Graph theory algorithms are applied to pairwise alignments to pinpoint putative chimeric...
Large-scale gene discovery in the pea aphid Acyrthosiphon pisum(Hemiptera) (2006)
Sabater-Muñoz, Beatriz, Legeai, Fabrice, Rispe, Claude, Bonhomme, Joël, Dearden, Peter, Dossat, Carole, ...
Abstract Aphids are the leading pests in agricultural crops. A large-scale sequencing of 40,904 ESTs from the pea aphid Acyrthosiphon pisum was carried out to define a catalog of 12,082 unique...
Aubourg, Sébastien, Brunaud, Véronique, Bruyère, Clémence, Cock, Mark, Cooke, Richard, Cottet, Annick, ...
Genomic projects heavily depend on genome annotations and are limited by the current deficiencies in the published predictions of gene structure and function. It follows that, improved annotation...
Subunit Gene Received, Aymeric Duclert, Nathalie Savatier, Laurent Schaeffer, Jean-pierre Changeux
this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate...
Aubourg, Sébastien, Brunaud, Véronique, Bruyère, Clémence, Cock, Mark, Cooke, Richard, Cottet, Annick, ...
Genomic projects heavily depend on genome annotations and are limited by the current deficiencies in the published predictions of gene structure and function. It follows that, improved annotation...
Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
Sabater-Muñoz, Beatriz, Legeai, Fabrice, Rispe, Claude, Bonhomme, Joël, Dearden, Peter, Dossat, Carole, ...
A large-scale sequencing analysis of the Hemiptera Acyrthosiphon pisumexpressed sequence tags corresponding to about 12,000 unique transcripts is described, along with an in silico profiling analysis...
Aubourg, Sébastien, Brunaud, Véronique, Bruyère, Clémence, Cock, Mark, Cooke, Richard, Cottet, Annick, ...
Genomic projects heavily depend on genome annotations and are limited by the current deficiencies in the published predictions of gene structure and function. It follows that, improved annotation...
Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)
Sabater-Muñoz, Beatriz, Legeai, Fabrice, Rispe, Claude, Bonhomme, Joël, Dearden, Peter, Dossat, Carole, ...
A large-scale sequencing analysis of the Hemiptera Acyrthosiphon pisumexpressed sequence tags corresponding to about 12,000 unique transcripts is described, along with an in silico profiling analysis...
A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences
Smith, Julianne, Grizot, Sylvestre, Arnould, Sylvain, Duclert, Aymeric, Epinat, Jean-Charles, Chames, Patrick, ...
Meganucleases, or homing endonucleases (HEs) are sequence-specific endonucleases with large (>14 bp) cleavage sites that can be used to induce efficient homologous gene targeting in cultured cells...