B. Wu

Publication List Details

Period

1991 - 2008

Number

88

Co-Authors

Three hydrolases and a transferase: comparative analysis of active-site dynamics via the BioSimGrid database (2007)

Tai, K., Baaden, M., Murdock, S., Wu, B., Ng, M.H., Johnston, S., ...

Comparative molecular dynamics (MD) simulations enable us to explore the conformational dynamics of the active sites of distantly related enzymes. We have used the BioSimGrid...

Tl2Ba2CuO6+d Brings Spectroscopic Probes Deep Into the Overdoped Regime of the High-Tc Cuprates (2006)

Peets, D. C., Mottershead, J. D. F., Wu, B., Elfimov, I. S., Liang, R., Hardy, W. N., ...

Single-particle spectroscopic probes, such as scanning tunneling and angle-resolved photoemission spectroscopy (ARPES), have provided us with crucial insights into the complex electronic structure of...

Crop canopy BRDF simulation and analysis using Monte Carlo method (2006)

Huang, J., Wu, B., Tian, Y.

This author designs the random process between photons and crop canopy. A Monte Carlo model has been developed to simulate the Bi-directional Reflectance Distribution Function (BRDF) of crop canopy....

Forest canopy BRDF simulation using Monte Carlo method (2006)

Huang, J., Wu, B., Tian, Y.

Monte Carlo method is a random statistic method, which has been widely used to simulate the Bidirectional Reflectance Distribution Function (BRDF) of vegetation canopy in the field of visible remote...

A new approach to measurement of saccharifying capacities of crude cellulase (2006)

Wu, B., Zhao, Y., Gao, P. J.

A practical, quantitative approach has been designed, which makes it possible to accurately estimate the saccharifying activities of crude cellulase preparations for insoluble cellulosics. The...

Can we schedule traffic more efficiently in optical packet switches? (2006)

Wu, B, Wang, X, Yeung, LK

We consider traffic scheduling in non-blocking electronic-buffered optical packet switches (OPS) with bounded packet delay. Due to the reconfiguration overhead of the switch fabric, the two commonly...

MET: an efficient static routing algorithm for WDM networks with full wavelength conversion (2006)

Wu, B, Yeung, LK

Aiming at simultaneously minimizing the network wavelength requirement (NWR) and the network bandwidth requirement (NBR) for a given traffic matrix, we focus on the static routing problem in WDM...

Grid computing and biomolecular simulation (2005)

Woods, Christopher J., Ng, Muan Hong, Johnston, Steven, Murdock, Stuart E., Wu, Bing, Tai, Kaihsu, ...

Biomolecular computer simulations are now widely used not only in an academic setting to understand the fundamental role of molecular dynamics on biological function, but also in the industrial...

Towards a grid-enabled biomolecular simulation database (2005)

Wu, Bing, Tai, Kaishu, Ng, Muan Hong, Johnston, Steven, Murdock, Stuart, Fangohr, Hans, ...

The overall aim of the BioSimGrid project is to build a distributed data and computing platform to enable large scale analysis of the results of biomolecular simulations. To address the challenges of...

Paragonimus skrjabini Chen, 1959 (Digenea: Paragonimidae) and related species in eastern Asia: A combined molecular and morphological approach to identification and taxonomy (2005)

Blair, D., Chang, Z. S., Chen, M. G., Cui, A. L., Wu, B., Agatsuma, T., ...

A molecular and morphometric investigation is reported on the species complex of mammalian lungflukes of which Paragonimus skrjabini Chen, 1959 and P. miyazakii Kamo, Nishida, Hatsushika & Tomimura,...

Paragonimus skrjabini Chen, 1959 (Digenea: Paragonimidae) and related species in eastern Asia: A combined molecular and morphological approach to identification and taxonomy (2005)

Blair, D., Chang, Z. S., Chen, M. G., Cui, A. L., Wu, B., Agatsuma, T., ...

A molecular and morphometric investigation is reported on the species complex of mammalian lungflukes of which Paragonimus skrjabini Chen, 1959 and P. miyazakii Kamo, Nishida, Hatsushika & Tomimura,...

On optimization of optical packet switches with reconfiguration overhead (2005)

Wu, B, Yeung, LK

Optical packet switching is one of the most promising technologies for carrying EP traffic over WDM optical networks. For optical packet switch (OPS) design, due to the reconfiguration overhead in...

Two-layer parallel switching: a practical and survivable design for performance guaranteed optical packet switches (2005)

Wu, B, Yeung, LK, Li, VOK

An optical packet switch (OPS) is called performance guaranteed if it can achieve 100% throughput with bounded packet delay. Presently, high speedup requirement and large packet delay are two main...

Traffic scheduling in non-blocking optical packet switches with minimum delay (2005)

Wu, B, Yeung, LK

For performance guaranteed OPS switches with reconfiguration overhead, it has been shown that packet delay can be minimized by using N switch configurations (where N is the switch size) to schedule...

Scheduling optical packet switches with minimum number of configurations (2005)

Wu, B, Yeung, LK

In order to achieve the minimum traffic delay in a performance guaranteed optical packet switch (OPS) with reconfiguration overhead, the switch fabric has to use the minimum number of configurations...

Rapid Variations in V2275 Cyg (Nova Cyg 2001 #2) (2004)

Garnavich, P. M., Macdonald, A. J., Wu, B., Easterday, S. M., Libal, A. J., Palumbo, A., ...

We present time-resolved CCD photometry of V2275 Cyg 790 days after the nova outburst. The data show a 20% peak-to-peak oscillation with a period of 24 minutes. The period appears stable over the two...

Minimizing internal speedup for performance guaranteed optical packet switches (2004)

Wu, B, Yeung, LK

Providing QoS guarantees for Internet services is very important. It evokes the issue that packet switches should provide guaranteed performance (i.e. 100% throughput with bounded worst-case delay)....

Investigating to Cavitation Behavior of Orifice Tunnel (2001)

Pan, S. S., Xiang, T., Wu, B.

Strong velocity scale effect on cavitation for orifice tunnels was revealed through comparing the results of model tests in vacuum tanks and that of prototype measurements at construction site. A new...

Evolutionary relationships between trematodes and snails emphasizing schistosomes and paragonimids (2001)

Blair, D., Davis, G. M., Wu, B.

Snails and digeneans have been associated for at least 200 million years. Their inter-relationships over such a time-span must have been complex and varied. Few studies have attempted to explore...

Evolutionary relationships between trematodes and snails emphasizing schistosomes and paragonimids (2001)

Blair, D., Davis, G. M., Wu, B.

Snails and digeneans have been associated for at least 200 million years. Their inter-relationships over such a time-span must have been complex and varied. Few studies have attempted to explore...

Application of Case Based Reasoning to Legacy System Migration (2000)

D. O Sullivan, R. Richardson, J. Grimson, B. Wu, J. Bisbal, D. Lawless

Algebra', `Basic-Matrix-Algebra' and `Component-Assemblies' could be exploited within a domain specific ontology of programming routines. References ...

Simulation of the ALICE DAQ System with GALSIM (2000)

Yuan, J, Wu, B, Skaali, B

We present some of the simulation results for the DAQ system of the ALICE Abstract:experiment at the Large Hadron Collider (LHC) at CERN. The simulation is performed by the ALICE DAQ Simulation...

On the Mechanics of Microballoon-Reinforced Metal Matrix Composites. (1998)

He, M. Y., Zok, F. W., Wu, B.

The elastic/plastic response of ceramic microballoon reinforced metal matrix composites subject to uniaxial loading are examined using finite element analysis. the microballoons are assumed to be...

COMPRESSIVE DEFORMATION OF HOLLOW MICROSPHERE REINFORCED METAL MATRIX COMPOSITES. (1998)

Kiser, M. T., He, M., Wu, B.

Hollow and Solid Spheres and Microspheres: Science and Technology Associated With Their Fabrication and Application; Symposium Held Nov-Dec 1994, Boston, Massachusetts; Edited by David L. Wilcox Sr.,...

Application of Case Based Reasoning to Legacy System Migration (1997)

D. O Sullivan, R. Richardson, J. Grimson, B. Wu, J. Bisbal, D. Lawless

Algebra ', `Basic-Matrix-Algebra' and `Component-Assemblies' could be exploited within a domain specific ontology of programming routines. References ...

Characterization of the chronobiological signals based on the continuous wavelet transform (1997)

Wu, B, Chan, FHY, Lam, FK, Poon, AMS, Poon, PWF, Chow, DCS

Chronobiology, which studies periodic patterns or rhythms in living beings, often needs to characterize the observed chronobiological time series (CTS) and to study the stability and adaptability of...

SCI Data Acquisition Systems: Doing more with less (1994)

A. Bogaerts, R. Keyser, G. Mugnai, P. Werner, B. Wu, B. Skaali

The RD24 Collaboration at CERN investigates the use of the Scalable Coherent Interface (SCI) for DAQ Systems at the LHC. We present the status of the hardware and software, simulations, switches and...

Status of the IUCF Proton Radiation Therapy Facility (1992)

Bloch, C., Fasano, M., Sandison, G., Wu, B., Derenchuk, V.P., ...

This research was sponsored by the National Science Foundation Grant NSF PHY-9314783

Development of a Proton Radiation Therapy Facility at IUCF (1991)

Bloch, C., Fasano, M., Sandison, G., Wu, B., Young, P., ...

This research was sponsored by the National Science Foundation Grant NSF PHY-9314783

Cloning and characterization of mouse CCAAT binding factor.

Hoeppner, M A, Gilbert, D J, Copeland, N G, Jenkins, N A, Linzer, D I, Wu, B

Isolation of cDNA clones for the mouse CCAAT binding factor (mCBF) has revealed the expression of two distinct forms of mCBF that are generated by alternative splicing of a single primary transcript...

Antiviral and resistance studies of AG1343, an orally bioavailable inhibitor of human immunodeficiency virus protease.

Patick, A K, Mo, H, Markowitz, M, Appelt, K, Wu, B, Musick, L, ...

AG1343 ([3S-(3R*,4aR*,8aR*,2'S*,3'S*)]-2-[2' hydroxy-3'-phenylthiomethyl-4'-aza-5'-oxo-5'-(2''-methyl-3''-hydro xy-phenyl) pentyl]-decahydroiso-quinoline-3-N-t-butylcarboxamide methanesulfonic acid)...

Infection of primary CD4+ and CD8+ T lymphocytes by Epstein-Barr virus enhances human immunodeficiency virus expression.

Guan, M, Zhang, R D, Wu, B, Henderson, E E

CD4+ and CD8+ T lymphocytes purified from normal adult donors by flow cytometry could be infected with Epstein-Barr virus (EBV) as measured by the accumulation of components of the EBV replicative...

Isolation and characterization of point mutations in the Escherichia coli grpE heat shock gene.

Wu, B, Ang, D, Snavely, M, Georgopoulos, C

The Escherichia coli grpE gene (along with dnaK, dnaJ, groEL, and groES) was originally identified as one of the host factors required for phage lambda growth. The classical grpE280 mutation was the...

The essential Escherichia coli msgB gene, a multicopy suppressor of a temperature-sensitive allele of the heat shock gene grpE, is identical to dapE.

Wu, B, Georgopoulos, C, Ang, D

The grpE gene product is one of three Escherichia coli heat shock proteins (DnaK, DnaJ, and GrpE) that are essential for both bacteriophage lambda DNA replication and bacterial growth at all...

Effects of S-adenosylhomocysteine and analogs on Epstein-Barr virus-induced transformation, expression of the Epstein-Barr virus capsid antigen, and methylation of Epstein-Barr virus DNA.

Long, W K, Fronko, G E, Lindemeyer, R G, Wu, B, Henderson, E E

S-Adenosylhomocysteine was found to have no effect on Epstein-Barr virus-induced transformation of B-lymphocytes and to stimulate viral capsid antigen expression only slightly in the FF41-1 cell...

Sensitive solid-phase immune electron microscopy double-antibody technique with gold-immunoglobulin G complexes for detecting rotavirus in cell culture and feces.

Wu, B, Mahony, J B, Simon, G, Chernesky, M A

A new solid-phase immune electron microscopy double-antibody colloidal-gold technique (SPIEMDAGT) was developed and compared with direct electron microscopy, direct immune electron microscopy, and...

Transfection of a glycosylated phosphatidylinositol-anchored folate-binding protein complementary DNA provides cells with the ability to survive in low folate medium.

Luhrs, C A, Raskin, C A, Durbin, R, Wu, B, Sadasivan, E, McAllister, W, ...

KB cells express a folate-binding protein that is anchored to the plasma membrane by a glycosylated phosphatidylinositol (GPI) tail and these cells can grow in medium containing a very low folate...

Expression of heat shock protein 70 is altered by age and diet at the level of transcription.

Heydari, A R, Wu, B, Takahashi, R, Strong, R, Richardson, A

Because heat shock proteins have been shown to play a critical role in protecting cells from hyperthermia and other types of physiological stresses, it was of interest to determine what effect age...

The hsp70 gene CCAAT-binding factor mediates transcriptional activation by the adenovirus E1a protein.

Lum, L S, Hsu, S, Vaewhongs, M, Wu, B

Expression of the human hsp70 gene is cell cycle regulated and is inducible by both serum and the adenovirus E1a protein (K. Milarski and R. Morimoto, Proc. Natl. Acad. Sci. USA 83:9517-9521, 1986;...

Structure and expression of the human gene encoding major heat shock protein HSP70.

Wu, B, Hunt, C, Morimoto, R

We have cloned a human gene encoding the 70,000-dalton heat shock protein (HSP70) from a human genomic library, using the Drosophila HSP70 gene as a heterologous hybridization probe. The human...

Structure-function analysis of the Escherichia coli GrpE heat shock protein.

Wu, B, Wawrzynow, A, Zylicz, M, Georgopoulos, C

We have isolated various missense mutations in the essential grpE gene of Escherichia coli based on the inability to propagate bacteriophage lambda. To better understand the biochemical mechanisms of...

Cloning and characterization of mouse CCAAT binding factor.

Hoeppner, M A, Gilbert, D J, Copeland, N G, Jenkins, N A, Linzer, D I, Wu, B

Isolation of cDNA clones for the mouse CCAAT binding factor (mCBF) has revealed the expression of two distinct forms of mCBF that are generated by alternative splicing of a single primary transcript...