André Lambert, Jean-fred Fontaine, Matthieu Legendre, Fabrice Leclerc, Emmanuelle Permal, François Major, ...
ERPIN is an RNA motif identification program that takes an RNA sequence alignment as an input and identifies related sequences using a profile-based dynamic programming algorithm. ERPIN differs from...
The ERPIN server: an interface to profile-based RNA motif identification (2004)
Lambert, André, Fontaine, Jean-Fred, Legendre, Matthieu, Leclerc, Fabrice, Permal, Emmanuelle, Major, François, ...
ERPIN is an RNA motif identification program that takes an RNA sequence alignment as an input and identifies related sequences using a profile-based dynamic programming algorithm. ERPIN differs from...
Qu, Liang-Hu, Henry, Yves, Nicoloso, Monique, Michot, Bernard, Azum, Marie-Claude, Renalier, Marie-Hélène, ...
Following computer searches of sequence banks, we have positively identified a novel Intronlc snoRNA, U24, encoded in the ribosomal protein L7a gene in humans and chicken. Like previously reported...
RNAlign program: alignment of RNA sequences using both primary and secondary structures (1994)
Corpet, Florence, Michot, Bernard
We have developed an algorithm and a computer program for aligning new RNA sequences with a bank of aligned homologous RNA sequences. Given a common folding structure for the bank, the program...
An algorithm for comparing RNA secondary structures and searching for similar substructures (1992)
Chevalet, Claude, Michot, Bernard
To access the functional informations carried by RNA molecules at the level of their secondary structure interactions, we propose a comparison method based on a tree edit algorithm which takes into...
Qu, Liang Hu, Michot, Bernard, Bachellerie, Jean-Pierre
He have developed a combined approach for probing native structures in large RNAs. In the first method, after digestion with a structure specific nuclease, accessible sites are mapped at sequence...
Michot, Bernard, Bachellerie, Jean-Pierre, Raynal, Francoise
We have determined the complete nucleotide sequence of the regions of mouse ribosomal RNA transcription unit which seperate mature rRNA genes. These internal transcribed spacers (ITS) are excised...
Michot, Bernard, Bachellerie, Jean-Pierre, Raynal, Françoise
We present the sequence of the 5′terminal 585 nucleotides of mouse 28S rRNA as inferred from the DNA sequence of a cloned gene fragment. The comparison of mouse 28S rRNA sequence with its yeast...
The ERPIN server: an interface to profile-based RNA motif identification
Lambert, André, Fontaine, Jean-Fred, Legendre, Matthieu, Leclerc, Fabrice, Permal, Emmanuelle, Major, François, ...
ERPIN is an RNA motif identification program that takes an RNA sequence alignment as an input and identifies related sequences using a profile-based dynamic programming algorithm. ERPIN differs from...
The ERPIN server: an interface to profile-based RNA motif identification
Lambert, André, Fontaine, Jean-Fred, Legendre, Matthieu, Leclerc, Fabrice, Permal, Emmanuelle, Major, François, ...
ERPIN is an RNA motif identification program that takes an RNA sequence alignment as an input and identifies related sequences using a profile-based dynamic programming algorithm. ERPIN differs from...