Neafsey, Daniel E, Schaffner, Stephen F, Volkman, Sarah K, Park, Daniel, Montgomery, Philip, Milner, Danny A, ...
Abstract Background The malaria parasite Plasmodium falciparum exhibits abundant genetic diversity, and this diversity is key to its success as a pathogen. Previous efforts to study genetic diversity...
ARTICLE An STS-Based Map of the Human Genome (2008)
Thomas J. Hudson, Lincoln D. Stein, Sebastian S. Gerety, Junli Ma, Andrew B. Castle, ...
A physical map has been constructed of the human genome containing 15,086 sequence-tagged sites (STSs), with an average spacing of 199 kilobases. The project involved assembly of a radiation hybrid...
Short-term genome evolution of Listeria monocytogenesin a non-controlled environment (2008)
Orsi, Renato H, Borowsky, Mark L, Lauer, Peter, Young, Sarah K, Nusbaum, Chad, Galagan, James E, ...
Abstract Background While increasing data on bacterial evolution in controlled environments are available, our understanding of bacterial genome evolution in natural environments is limited. We thus...
Short-term genome evolution of Listeria monocytogenes in a non-controlled environment (2008)
Orsi, Renato H., Borowsky, Mark L., Lauer, Peter, Young, Sarah K., Nusbaum, Chad, Galagan, James E., ...
Background: While increasing data on bacterial evolution in controlled environments are available, our understanding of bacterial genome evolution in natural environments is limited. We thus...
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis (2006)
Kahmann, Regine, Bölker, Michael, Ma, Li-Jun, Brefort, Thomas, Saville, Barry J, ...
Ustilago maydis is a ubiquitous pathogen of maize and a well-established model organism for the study of plant-microbe interactions. This basidiomycete fungus does not use aggressive virulence...
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae (2005)
Galagan, James E., Calvo, Sarah E., Cuomo, Christina, Ma, Li-Jun, Wortman, Jennifer R., Batzoglou, Serafim, ...
The aspergilli comprise a diverse group of filamentous fungi spanning over 200 million years of evolution. Here we report the genome sequence of the model organism Aspergillus nidulans, and a...
Mouse Molecular Cytogenetic Resource: 157 BACs Link the Chromosomal and Genetic Maps (1999)
Korenberg, Julie R., Chen, Xiao-Ning, Devon, Keri L., Noya, David, Oster-Granite, Mary L., Birren, Bruce W.
A bacterial artificial chromosome-based framework contig map of human chromosome 22q (1996)
Kim, Ung-Jin, Shizuya, Hiroaki, Kang, Hyung-Lyun, Choi, Sun-Shim, Garrett, Charmain L., Smink, Luc J., ...
We have constructed a physical map of human chromosome 22q using bacterial artificial chromosome (BAC) clones. The map consists of 613 chromosome 22-specific BAC clones that have been localized and...
Incluye bibliografía e índice
Fong, Henry K. W., Birren, Bruce W., Simon, Melvin I.
Two distinct β subunits of guanine nucleotide-binding regulatory proteins have been identified by cDNA cloning and are referred to as β 1 and β 2 subunits. The bovine transducin β subunit (β 1)...
Regulation of the rat metallothionein-I gene by sodium butyrate (1986)
Birren, Bruce W., Herschman, Harvey R.
Sodium butyrate selectively induces accumulation of metallothionein-I (MT-I) RNA in H4IIE rat hepatoma cells. The induction 1s rapid; significant elevation in cytoplasnric MT-I RNA can be observed...
Mapping of Myxococcus xanthus Social Motility dsp Mutations to the dif Genes
Lancero, Hope, Brofft, Jennifer E., Downard, John, Birren, Bruce W., Nusbaum, Chad, Naylor, Jerome, ...
Myxococcus xanthus dsp and dif mutants have similar phenotypes in that they are deficient in social motility and fruiting body development. We compared the two loci by genetic mapping,...
Mouse Molecular Cytogenetic Resource: 157 BACs Link the Chromosomal and Genetic Maps
Korenberg, Julie R., Chen, Xiao-Ning, Devon, Keri L., Noya, David, Oster-Granite, Mary L., Birren, Bruce W.
We have established a collection of strong molecular cytogenetic markers that span the mouse autosomes and X chromosome at an average spacing of one per 19 Mb and identify 127 distinct band...
Korenberg, Julie R., Chen, Xiao-Ning, Sun, Zhiguang, Shi, Zheng-Yang, Ma, Shaowu, Vataru, Eddy, ...
Human genome sequencing is accelerating rapidly. Multiple genome maps link this sequence to problems in biology and clinical medicine. Because each map represents a different aspect of the structure,...
Mapping of Myxococcus xanthus Social Motility dsp Mutations to the dif Genes
Lancero, Hope, Brofft, Jennifer E., Downard, John, Birren, Bruce W., Nusbaum, Chad, Naylor, Jerome, ...
Myxococcus xanthus dsp and dif mutants have similar phenotypes in that they are deficient in social motility and fruiting body development. We compared the two loci by genetic mapping,...
Mouse Molecular Cytogenetic Resource: 157 BACs Link the Chromosomal and Genetic Maps
Korenberg, Julie R., Chen, Xiao-Ning, Devon, Keri L., Noya, David, Oster-Granite, Mary L., Birren, Bruce W.
We have established a collection of strong molecular cytogenetic markers that span the mouse autosomes and X chromosome at an average spacing of one per 19 Mb and identify 127 distinct band...
Korenberg, Julie R., Chen, Xiao-Ning, Sun, Zhiguang, Shi, Zheng-Yang, Ma, Shaowu, Vataru, Eddy, ...
Human genome sequencing is accelerating rapidly. Multiple genome maps link this sequence to problems in biology and clinical medicine. Because each map represents a different aspect of the structure,...
Hane, James K., Lowe, Rohan G.T., Solomon, Peter S., Tan, Kar-Chun, Schoch, Conrad L., Spatafora, Joseph W., ...
Stagonospora nodorum is a major necrotrophic fungal pathogen of wheat (Triticum aestivum) and a member of the Dothideomycetes, a large fungal taxon that includes many important plant pathogens...
Short-term genome evolution of Listeria monocytogenes in a non-controlled environment
Orsi, Renato H, Borowsky, Mark L, Lauer, Peter, Young, Sarah K, Nusbaum, Chad, Galagan, James E, ...
Neafsey, Daniel E, Schaffner, Stephen F, Volkman, Sarah K, Park, Daniel, Montgomery, Philip, Milner, Danny A, ...
An array-based SNP genotyping platform for Plasmodium falciparum is reported together with an analysis of SNP diversity in global population samples.
A High-Density Single Nucleotide Polymorphism Map for Neurospora crassa
Lambreghts, Randy, Shi, Mi, Belden, William J., DeCaprio, David, Park, Danny, Henn, Matthew R., ...
We report the discovery and validation of a set of single nucleotide polymorphisms (SNPs) between the reference Neurospora crassa strain Oak Ridge and the Mauriceville strain (FGSC 2555), of...
Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication
Ma, Li-Jun, Ibrahim, Ashraf S., Skory, Christopher, Grabherr, Manfred G., Burger, Gertraud, Butler, Margi, ...
Rhizopus oryzae is the primary cause of mucormycosis, an emerging, life-threatening infection characterized by rapid angioinvasive growth with an overall mortality rate that exceeds 50%. As a...
Whole Genome Amplification and De novo Assembly of Single Bacterial Cells
Rodrigue, Sébastien, Malmstrom, Rex R., Berlin, Aaron M., Birren, Bruce W., Henn, Matthew R., Chisholm, Sallie W.
Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives
Sharpton, Thomas J., Stajich, Jason E., Rounsley, Steven D., Gardner, Malcolm J., Wortman, Jennifer R., Jordar, Vinita S., ...
While most Ascomycetes tend to associate principally with plants, the dimorphic fungi Coccidioides immitis and Coccidioides posadasii are primary pathogens of immunocompetent mammals, including...