Discovering microRNAs from deep sequencing data using miRDeep (2008)
Friedländer, Marc R, Chen, Wei, Adamidi, Catherine, Maaskola, Jonas, Einspanier, Ralf, Knespel, Signe, ...
The capacity of highly parallel sequencing technologies to detect small RNAs at unprecedented depth suggests their value in systematically identifying microRNAs (miRNAs). However, the identification...
Control of branch-site choice by a group II intron
Chu, Vi T., Adamidi, Catherine, Liu, Qiaolian, Perlman, Philip S., Pyle, Anna Marie
The branch site of group II introns is typically a bulged adenosine near the 3′-end of intron domain 6. The branch site is chosen with extraordinarily high fidelity, even when the adenosine is...
Control of branch-site choice by a group II intron
Chu, Vi T., Adamidi, Catherine, Liu, Qiaolian, Perlman, Philip S., Pyle, Anna Marie
The branch site of group II introns is typically a bulged adenosine near the 3′-end of intron domain 6. The branch site is chosen with extraordinarily high fidelity, even when the adenosine is...
High-resolution profiling and discovery of planarian small RNAs
Friedländer, Marc R., Adamidi, Catherine, Han, Ting, Lebedeva, Svetlana, Isenbarger, Thomas A., Hirst, Martin, ...
Freshwater planarian flatworms possess uncanny regenerative capacities mediated by abundant and collectively totipotent adult stem cells. Key functions of these cells during regeneration and tissue...