Clément-Ziza, Mathieu, Malabat, Christophe, Weber, Christian, Moszer, Ivan, Aittokallio, Tero, Letondal, Catherine, ...
Summary: Genoscape is an open-source Cytoscape plug-in that visually integrates gene expression data sets from GenoScript, a transcriptomic database, and KEGG pathways into Cytoscape networks. The...
Mobyle: a new full web bioinformatics framework (2009)
Néron, Bertrand, Ménager, Hervé, Maufrais, Corinne, Joly, Nicolas, Maupetit, Julien, Letort, Sébastien, ...
Motivation: For the biologist, running bioinformatics analyses involves a time-consuming management of data and tools. Users need support to organize their work, retrieve parameters and reproduce...
ABSTRACT The Paperoles Project: An analysis of paper use by music composers (2008)
Technologies such as Anoto offer a novel approach to supporting the creative design process, by integrating paper with on-line tools. However, creating successful 'augmented paper'...
Python course in Bioinformatics (2008)
Catherine Letondal, Katja Schuerer, Catherine Letondal
examples. The picture above represents the 3D structure of the Human Ferroxidase
Over the past seven years, we have been conducting a variety of participatory design activities with research biologists, programmers, and bioinformaticians at the Institut Pasteur in Paris. We first...
PageLinker: Integrating Contextual Bookmarks within a Browser (2008)
Aurélien Tabard, Wendy Mackay, Nicolas Roussel, Catherine Letondal
PageLinker is a browser extension that contextualises navigation by linking web pages together and allows navigation through a network of related web pages without prior planning. The design is based...
PageLinker: Integrating Contextual Bookmarks within a Browser (2008)
Aurélien Tabard, Wendy Mackay, Nicolas Roussel, Catherine Letondal
PageLinker is a browser extension that contextualises navigation by linking web pages together and allows navigation through a network of related web pages without prior planning. The design is based...
The Missing Link: Augmenting (2008)
Wendy E. Mackay, Guillaume Pothier, Catherine Letondal, Kaare Bøegh, Hans Erik Sørensen
Using a participatory design process, we created three prototype augmented laboratory notebooks that provide the missing link between paper, physical artifacts and on-line data. The final a-book...
Nicolas Roussel, Aurelien Tabard, Catherine Letondal
Experiences in our Micromegas project have shown that a detailed interaction log can be valuable to both users and designers of interactive systems. In this paper, we describe two di#erent attempts...
Anticipating Scientific Software Evolution as a Combined Technological and Design Approach (2003)
Evolution in scientific software is often according to a specific pattern of software changes: professional scientists, who are not professional software developers, need rapid, dynamic, and...
A Web interface generator for molecular biology programs in Unix (2001)
Motivation: Almost all users encounter problems using sequence analysis programs. Not only are they difficult to learn because of the parameters, syntax and semantic, but many are different. That is...
Clément-Ziza, Mathieu, Malabat, Christophe, Weber, Christian, Moszer, Ivan, Aittokallio, Tero, Letondal, Catherine, ...
Summary: Genoscape is an open-source Cytoscape plug-in that visually integrates gene expression data sets from GenoScript, a transcriptomic database, and KEGG pathways into Cytoscape networks. The...
Mobyle: a new full web bioinformatics framework
Néron, Bertrand, Ménager, Hervé, Maufrais, Corinne, Joly, Nicolas, Maupetit, Julien, Letort, Sébastien, ...
Motivation: For the biologist, running bioinformatics analyses involves a time-consuming management of data and tools. Users need support to organize their work, retrieve parameters and reproduce...