Claudine Devauchelle

Comparing sequences without using alignments: application to HIV/SIV subtyping (2007)

Didier, Gilles, Debomy, Laurent, Pupin, Maude, Zhang, Ming, Grossmann, Alexander, Devauchelle, Claudine, ...

Abstract Background In general, the construction of trees is based on sequence alignments. This procedure, however, leads to loss of informationwhen parts of sequence alignments (for instance...

HIV/SIV subtyping (2007)

Bmc Bioinformatics, Gilles Didier, Laurent Debomy, Maude Pupin, Ming Zhang, Er Grossmann, ...

Comparing sequences without using alignments: application to

HIV-1 and HIV-2 LTR Nucleotide Sequences: Assessment of the Alignment by N-block Presentation, "Retroviral Signatures" of Overrepeated Oligonucleotides, and a Probable Important Role of Scrambled Stepwise Duplications/Deletions in Molecular Evolution (2001)

Laprevotte, Ivan, Pupin, Maude, Coward, Eivind, Didier, Gilles, Terzian, Christophe, Devauchelle, Claudine, ...

Previous analyses of retroviral nucleotide sequences, suggest a so-called “scrambled duplicative stepwise molecular evolution” (many sectors with successive duplications/deletions of short and...

Comparing sequences without using alignments: application to HIV/SIV subtyping

Didier, Gilles, Debomy, Laurent, Pupin, Maude, Zhang, Ming, Grossmann, Alexander, Devauchelle, Claudine, ...