Daixing Zhou

Transcriptome Analysis Tools: Visualization and Management of Ultra-High Volume of DNA Sequence Data (2008)

Irina Khrebtukova, Christian D. Haudenschild, Daixing Zhou, Selene M. Virk, Maria Johnson, Keith Moon, ...

It is generally believed that the first step toward systems biology is to construct a comprehensive expression database that catalogs all the mRNA and regulatory RNA in a sample and documents their...

Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS) (2006)

Crawford, Gregory E., Holt, Ingeborg E., Whittle, James, Webb, Bryn D., Tai, Denise, Davis, Sean, ...

A major goal in genomics is to understand how genes are regulated in different tissues, stages of development, diseases, and species. Mapping DNase I hypersensitive (HS) sites within nuclear...

An atlas of human gene expression from massively parallel signature sequencing (MPSS) (2005)

Jongeneel, C. Victor, Delorenzi, Mauro, Iseli, Christian, Zhou, Daixing, Haudenschild, Christian D., Khrebtukova, Irina, ...

We have used massively parallel signature sequencing (MPSS) to sample the transcriptomes of 32 normal human tissues to an unprecedented depth, thus documenting the patterns of expression of almost...

Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS) (2005)

Crawford, Gregory E., Holt, Ingeborg E., Whittle, James, Webb, Bryn D., Tai, Denise, Davis, Sean, ...

A major goal in genomics is to understand how genes are regulated in different tissues, stages of development, diseases, and species. Mapping DNase I hypersensitive (HS) sites within nuclear...

mRNA accessible site tagging (MAST): a novel high throughput method for selecting effective antisense oligonucleotides (2003)

Zhang, Hong-Yan, Mao, Jianping, Zhou, Daixing, Xu, Yunhe, Thonberg, Håkan, Liang, Zicai, ...

A solution‐based method, mRNA accessible site tagging (MAST), has been developed to map the accessible sites of any given mRNA in high throughput fashion. mRNA molecules were immobilized and...

Developmental Expression of Spectrins in Rat Skeletal Muscle

Zhou, Daixing, Ursitti, Jeanine A., Bloch, Robert J.

Skeletal muscle contains spectrin (or spectrin I) and fodrin (or spectrin II), members of the spectrin supergene family. We used isoform-specific antibodies and cDNA probes to investigate the...

mRNA accessible site tagging (MAST): a novel high throughput method for selecting effective antisense oligonucleotides

Zhang, Hong-Yan, Mao, Jianping, Zhou, Daixing, Xu, Yunhe, Thonberg, Håkan, Liang, Zicai, ...

A solution-based method, mRNA accessible site tagging (MAST), has been developed to map the accessible sites of any given mRNA in high throughput fashion. mRNA molecules were immobilized and...

An atlas of human gene expression from massively parallel signature sequencing (MPSS)

Jongeneel, C. Victor, Delorenzi, Mauro, Iseli, Christian, Zhou, Daixing, Haudenschild, Christian D., Khrebtukova, Irina, ...

We have used massively parallel signature sequencing (MPSS) to sample the transcriptomes of 32 normal human tissues to an unprecedented depth, thus documenting the patterns of expression of almost...

Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)

Crawford, Gregory E., Holt, Ingeborg E., Whittle, James, Webb, Bryn D., Tai, Denise, Davis, Sean, ...

A major goal in genomics is to understand how genes are regulated in different tissues, stages of development, diseases, and species. Mapping DNase I hypersensitive (HS) sites within nuclear...

Developmental Expression of Spectrins in Rat Skeletal Muscle

Zhou, Daixing, Ursitti, Jeanine A., Bloch, Robert J.

Skeletal muscle contains spectrin (or spectrin I) and fodrin (or spectrin II), members of the spectrin supergene family. We used isoform-specific antibodies and cDNA probes to investigate the...

mRNA accessible site tagging (MAST): a novel high throughput method for selecting effective antisense oligonucleotides

Zhang, Hong-Yan, Mao, Jianping, Zhou, Daixing, Xu, Yunhe, Thonberg, Håkan, Liang, Zicai, ...

A solution-based method, mRNA accessible site tagging (MAST), has been developed to map the accessible sites of any given mRNA in high throughput fashion. mRNA molecules were immobilized and...

An atlas of human gene expression from massively parallel signature sequencing (MPSS)

Jongeneel, C. Victor, Delorenzi, Mauro, Iseli, Christian, Zhou, Daixing, Haudenschild, Christian D., Khrebtukova, Irina, ...

We have used massively parallel signature sequencing (MPSS) to sample the transcriptomes of 32 normal human tissues to an unprecedented depth, thus documenting the patterns of expression of almost...

Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)

Crawford, Gregory E., Holt, Ingeborg E., Whittle, James, Webb, Bryn D., Tai, Denise, Davis, Sean, ...

A major goal in genomics is to understand how genes are regulated in different tissues, stages of development, diseases, and species. Mapping DNase I hypersensitive (HS) sites within nuclear...

Transcription factor expression in lipopolysaccharide-activated peripheral-blood-derived mononuclear cells

Roach, Jared C., Smith, Kelly D., Strobe, Katie L., Nissen, Stephanie M., Haudenschild, Christian D., Zhou, Daixing, ...

Transcription factors play a key role in integrating and modulating biological information. In this study, we comprehensively measured the changing abundances of mRNAs over a time course of...

Nervous System Defects of AnkyrinB (−/−) Mice Suggest Functional Overlap between the Cell Adhesion Molecule L1 and 440-kD AnkyrinB in Premyelinated Axons

Scotland, Paula, Zhou, Daixing, Benveniste, Helene, Bennett, Vann

The L1 CAM family of cell adhesion molecules and the ankyrin family of spectrin-binding proteins are candidates to collaborate in transcellular complexes used in diverse contexts in nervous systems...

AnkyrinG Is Required for Clustering of Voltage-gated Na Channels at Axon Initial Segments and for Normal Action Potential Firing

Zhou, Daixing, Lambert, Stephen, Malen, Peter L., Carpenter, Scott, Boland, Linda M., Bennett, Vann

Voltage-gated sodium channels (NaCh) are colocalized with isoforms of the membrane-skeletal protein ankyrinG at axon initial segments, nodes of Ranvier, and postsynaptic folds of the mammalian...

Small, Membrane-bound, Alternatively Spliced Forms of Ankyrin 1 Associated with the Sarcoplasmic Reticulum of Mammalian Skeletal Muscle

Zhou, Daixing, Birkenmeier, Connie S., Williams, McRae W., Sharp, John J., Barker, Jane E., Bloch, Robert J.

We have recently found that the erythroid ankyrin gene, Ank1, expresses isoforms in mouse skeletal muscle, several of which share COOH-terminal sequence with previously known Ank1 isoforms but have a...