Abstract Sequoia: Programming the Memory Hierarchy (2008)
Kayvon Fatahalian, Timothy J. Knight, Mike Houston, Mattan Erez, Daniel Reiter, Horn Larkhoon, ...
We present Sequoia, a programming language designed to facilitate the development of memory hierarchy aware parallel programs that remain portable across modern machines featuring different memory...
Abstract ClawHMMER: A Streaming HMMer-Search Implementation (2008)
Daniel Reiter, Horn Mike, Houston Pat Hanrahan
The proliferation of biological sequence data has motivated the need for an extremely fast probabilistic sequence search. One method for performing this search involves evaluating the Viterbi...
Abstract ClawHMMER: A Streaming HMMer-Search Implementation (2008)
Daniel Reiter, Horn Mike, Houston Pat Hanrahan
The proliferation of biological sequence data has motivated the need for an extremely fast probabilistic sequence search. One method for performing this search involves evaluating the Viterbi...
Abstract Sequoia: Programming the Memory Hierarchy (2008)
Kayvon Fatahalian, Timothy J. Knight, Mike Houston, Mattan Erez, Daniel Reiter, Horn Larkhoon, ...
We present Sequoia, a programming language designed to facilitate the development of memory hierarchy aware parallel programs that remain portable across modern machines featuring different memory...
Abstract Interactive k-D Tree GPU Raytracing (2008)
Daniel Reiter, Horn Jeremy, Sugerman Mike, Houston Pat Hanrahan
Over the past few years, the powerful computation rates and high memory bandwidth of GPUs have attracted efforts to run raytracing on GPUs. Our work extends Foley et al.’s GPU k-d tree research. We...
Abstract ClawHMMER: A Streaming HMMer-Search Implementation (2008)
Daniel Reiter, Horn Mike, Houston Pat Hanrahan
The proliferation of biological sequence data has motivated the need for an extremely fast probabilistic sequence search. One method for performing this search involves evaluating the Viterbi...