DiGuistini, Scott, Liao, Nancy Y, Platt, Darren, Robertson, Gordon, Seidel, Michael, Chan, Simon K, ...
Abstract Sequencing-by-synthesis technologies can reduce the cost of generating de novo genome assemblies. We report a method for assembling draft genome sequences of eukaryotic organisms that...
Description Diamondbase Is, Darren Platt, Andrew Davison, Kevin Lentin
Introduction This section is depressingly large at the moment. It outlines the areas where we believe Diamondbase is currently deficient. This is by no means an exhaustive list, and we are open to...
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis (2006)
Kahmann, Regine, Bölker, Michael, Ma, Li-Jun, Brefort, Thomas, Saville, Barry J, ...
Ustilago maydis is a ubiquitous pathogen of maize and a well-established model organism for the study of plant-microbe interactions. This basidiomycete fungus does not use aggressive virulence...
Sequencing and analysis of Neanderthal genomic DNA (2006)
Coop, Graham, Kudaravalli, Sridhar, Smith, Doug, Krause, Johannes, Alessi, Joe, ...
Our knowledge of Neanderthals is based on a limited number of remains and artifacts from which we must make inferences about their biology, behavior, and relationship to ourselves. Here, we describe...
Sequencing and Analysis of Neanderthal Genomic DNA (2006)
Noonan, James P., Coop, Graham, Kudaravalli, Sridhar, Smith, Doug, Krause, Johannes, Alessi, Joe, ...
Recovery and analysis of multiple Neanderthal autosomal sequences using a metagenomic approach reveals that modern humans and Neanderthals split ~;400,000 years ago, without significant evidence of...
Physical map-assisted whole-genome shotgun sequence assemblies (2006)
Warren, René L., Varabei, Dmitry, Platt, Darren, Huang, Xiaoqiu, Messina, David, Yang, Shiaw-Pyng, ...
We describe a targeted approach to improve the contiguity of whole-genome shotgun sequence (WGS) assemblies at run-time, using information from Bacterial Artificial Chromosome (BAC)-based physical...
Giovanni Della-Libera, Microsoft (2005)
Toufic Boubez, Marc Chanliau, Computer Associates, Praerit Garg Microsoft, Martin Gudgin (editor, Satoshi Hada Ibm, ...
“Specification”, which includes WSDL and schema documents), in any medium without fee or royalty is hereby granted, provided that you include the following on ALL copies of the Specification,...
Giovanni Della-Libera, Microsoft (2005)
Toufic Boubez, Marc Chanliau, Computer Associates, Praerit Garg Microsoft, Martin Gudgin (editor, ...
includes WSDL and schema documents), in any medium without fee or royalty is hereby granted, provided that you include the following on ALL copies of the Specification, that you make: 1. A link or...
Physical map-assisted whole-genome shotgun sequence assemblies
Warren, René L., Varabei, Dmitry, Platt, Darren, Huang, Xiaoqiu, Messina, David, Yang, Shiaw-Pyng, ...
We describe a targeted approach to improve the contiguity of whole-genome shotgun sequence (WGS) assemblies at run-time, using information from Bacterial Artificial Chromosome (BAC)-based physical...
Physical map-assisted whole-genome shotgun sequence assemblies
Warren, René L., Varabei, Dmitry, Platt, Darren, Huang, Xiaoqiu, Messina, David, Yang, Shiaw-Pyng, ...
We describe a targeted approach to improve the contiguity of whole-genome shotgun sequence (WGS) assemblies at run-time, using information from Bacterial Artificial Chromosome (BAC)-based physical...
Marcy, Yann, Ouverney, Cleber, Bik, Elisabeth M., Lösekann, Tina, Ivanova, Natalia, Martin, Hector Garcia, ...
We have developed a microfluidic device that allows the isolation and genome amplification of individual microbial cells, thereby enabling organism-level genomic analysis of complex microbial...
DiGuistini, Scott, Liao, Nancy Y, Platt, Darren, Robertson, Gordon, Seidel, Michael, Chan, Simon K, ...
A method for de novo assembly of a eukaryotic genome using Illumina, 454 and Sanger generated sequence data