On cardinal invariants and generators for von Neumann algebras (2009)
We demonstrate how virtually all common cardinal invariants associated to a von Neumann algebra M can be computed from the decomposability number, dec(M), and the minimal cardinality of a generating...
Is Narrative Fundamental?: Beckett’s Levinasian Question in Malone Dies (2009)
Journal of Modern Literature - Volume 32, Number 4, Summer 2009
Model theory of operator algebras I: Stability (2009)
Farah, Ilijas, Hart, Bradd, Sherman, David
Several authors have considered whether the ultrapower and the relative commutant of a C*-algebra or II_1 factor depend on the choice of the ultrafilter. We show that the negative answer to each of...
Conditional expectations onto maximal abelian *-subalgebras (2009)
Akemann, Charles A., Sherman, David
We determine when there is a unique conditional expectation from a semifinite von Neumann algebra onto a singly-generated maximal abelian *-subalgebra. Our work extends the results of Kadison and...
Notes on automorphisms of ultrapowers of II_1 factors (2008)
In functional analysis, approximative properties of an object become precise in its ultrapower. We discuss this idea and its consequences for automorphisms of II_1 factors. Here are some sample...
Protein-Protein Interaction Networks, developed by (2008)
Florian Iragne, Macha Nikolski, David Auber, David Sherman
Summary: ProViz is a tool for the visualization of
Efficient generation of pertinent target sets for the BlastSets system (2008)
Isabelle Dutour, David Sherman
Abstract: The BlastSets strategy uses a probabilistic model to compare a query set to target sets of proteins. Target sets are neighborhoods that group proteins sharing some biological properties....
, Bertrand Mathieu ¢¡¤£ (2008)
David Auber, Florian Iragne, Macha Nikolski, David Sherman
Summary: ProViz is a tool for the visualization of Protein-Protein Interaction Networks that provides facilities to navigate through large graphs, as well as biologically relevant exploration...
BMC Biology BioMed Central (2008)
Samuel Kerrien, Ra Orchard, Luisa Montecchi-palazzi, Bruno Ar, Antony F Quinn, Nisha Vinod, ...
Software Broadening the horizon – level 2.5 of the HUPO-PSI format for
A Dybyuk's journey : a directorial process of Tony Kushner's "A Dybbuk" (2008)
The following is a document outlining the process of directing a production of the stage play A Dybbuk as part of Theatre at UBC’s 2007/2008 season. My main objective in directing this piece of...
EM code Semantics, Analysis, and Optimization (2007)
Greco De Programmation, David Sherman, David Sherman
This paper is a complete presentation of EM code, an intermediate code for representing the pattern-matching automata produced by the Equational Logic Programming system. We present the abstract...
EM code Semantics, Analysis, and Optimization (2007)
Greco De Programmation, David Sherman, David Sherman
This paper is a complete presentation of EM code, an intermediate code for representing the pattern-matching automata produced by the Equational Logic Programming system. We present the abstract...
ProViz: Protein Interaction Visualization and Exploration Tool (2007)
David Auber, Florian Iragne, Macha Nikolski, David Sherman
Analysis of protein-protein interaction (PPI) networks requires a combination of algorithmic and visualization tools, ideally integrated within a software platform that is itself integrated with...
Divisible operators in von Neumann algebras (2006)
Relativizing an idea from multiplicity theory, we say that an element x of a von Neumann algebra M is n-divisible if (W*(x)' cap M) unitally contains a factor of type I_n. We decide the density of...
Sherman, David, Durrens, Pascal, Iragne, Florian, Beyne, Emmanuelle, Nikolski, Macha, Souciet, Jean-Luc
The Génolevures online database (http://cbi.labri.fr/Genolevures/) provides tools and data relative to 4 complete and 10 partial genome sequences determined and manually annotated by the...
Events of alterity : post-subjective temporalities in Woolf, Faulkner, and Beckett / (2005)
Thesis (Ph. D.)--New York University, Graduate School of Arts and Science, 2005.
Events of alterity : post-subjective temporalities in Woolf, Faulkner, and Beckett / (2005)
Typescript.
ProViz: protein interaction visualization and exploration (2005)
Iragne, Florian, Nikolski, Macha, Mathieu, Bertrand, Auber, David, Sherman, David
Summary: ProViz is a tool for the visualization of protein–protein interaction networks, developed by the IntAct European project. It provides facilities for navigating in large graphs and...
IntAct: an open source molecular interaction database (2004)
Hermjakob, Henning, Montecchi-Palazzi, Luisa, Lewington, Chris, Mudali, Sugath, Kerrien, Samuel, Orchard, Sandra, ...
IntAct provides an open source database and toolkit for the storage, presentation and analysis of protein interactions. The web interface provides both textual and graphical representations of...
Aurélien Barré, Nicolas Goffard, David Sherman, Isabelle Dutour, Antoine De Daruvar
strategy for the representation and the integration
ProViz: Protein Interaction Visualization and Exploration (2004)
Iragne, Florian, Nikolski, Macha, Mathieu, Bertrand, Auber, David, Sherman, David
Summary: ProViz is a tool for the visualization of Protein-Protein Interaction Networks, developed by the IntAct european project. It provides facilities for navigating in large graphs and exploring...
Barriot, Roland, Poix, Jérôme, Groppi, Alexis, Barré, Aurélien, Goffard, Nicolas, Sherman, David, ...
The combination of sequencing and post-sequencing experimental approaches produces huge collections of data that are highly heterogeneous both in structure and in semantics. We propose a new strategy...
Genolevures: comparative genomics and molecular evolution of hemiascomycetous yeasts (2004)
Sherman, David, Durrens, Pascal, Beyne, Emmanuelle, Nikolski, Macha, Souciet, Jean-Luc
The Génolevures online database (http://cbi.labri.fr/Genolevures/) provides data and tools to facilitate comparative genomic studies on hemiascomycetous yeasts. Now, four complete genome sequences...
IntAct: an open source molecular interaction database (2004)
Hermjakob, Henning, Montecchi-Palazzi, Luisa, Lewington, Chris, Mudali, Sugath, Kerrien, Samuel, Orchard, Sandra, ...
IntAct provides an open source database and toolkit for the storage, presentation and analysis of protein interactions. The web interface provides both textual and graphical representations of...
ProViz: Protein Interaction Visualization and Exploration (2004)
Iragne, Florian, Nikolski, Macha, Mathieu, Bertrand, Auber, David, Sherman, David
Summary: ProViz is a tool for the visualization of Protein-Protein Interaction Networks, developed by the IntAct european project. It provides facilities for navigating in large graphs and exploring...
Partial evaluation is greatly simplified if the target language is simple. In [SS90] we define an extremely simple language that is used as an intermediate language for equational programming...
Optimization of equational programs using partial evaluation (1991)
D'epartement d'Informatique Universit'e de Bordeaux 1 We describe an application of partial evaluation to the optimization of Equational Logic programs. Our method treats the...
Vijayasarathy, S., Ernest, Isabelle, Ltzhaki, Jane E., Sherman, David, Mowatt, Michael R., Michael, Paul A.M., ...
The fructose bisphosphate aldolase genes ofTrypanosoma bruceiare interspersed with unrelated genes whose transcript levels show no developmental modulation. Transcription appears approximately...
A cry of bleakness : the evolution of Raymond Carver's short fiction / (1988)
Thesis (M.A.)--Concordia University, Dept. of English, 1988.
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Thesis (M.A.)--Clark University, 1930.
Fusion and Fission of Genes Define a Metric between Fungal Genomes
Durrens, Pascal, Nikolski, Macha, Sherman, David
Gene fusion and fission events are key mechanisms in the evolution of gene architecture, whose effects are visible in protein architecture when they occur in coding sequences. Until now, the...