Campbell, Barbara J., Smith, Julie L., Hanson, Thomas E., Klotz, Martin G., Stein, Lisa Y., Lee, Charles K., ...
Submarine hydrothermal vents are model systems for the Archaean Earth environment, and some sites maintain conditions that may have favored the formation and evolution of cellular life. Vents are...
Campbell, Barbara J., Smith, Julie L., Hanson, Thomas E., Klotz, Martin G., Stein, Lisa Y., Lee, Charles K., ...
Submarine hydrothermal vents are model systems for the Archaean Earth environment, and some sites maintain conditions that may have favored the formation and evolution of cellular life. Vents are...
Environmental Genome Shotgun Sequencing of the Sargasso Sea (2008)
Sargasso Sea, J. Craig Venter, Et Al, J. Craig Venter, Karin Remington, John F. Heidelberg, ...
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Douglas B. Rusch, Aaron L. Halpern, Granger Sutton, Karla B. Heidelberg, Shannon Williamson, Shibu Yooseph, ...
The world's oceans contain a complex mixture of micro-organisms that are for the most part, uncharacterized both genetically and biochemically. We report here a metagenomic study of the marine...
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. (2006)
Eisen, Jonathan A, Coyne, Robert S, Wu, Martin, Wu, Dongying, Thiagarajan, Mathangi, Wortman, Jennifer R, ...
The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct...
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote (2006)
Eisen, Jonathan A, Coyne, Robert S, Wu, Martin, Wu, Dongying, Thiagarajan, Mathangi, Wortman, Jennifer R, ...
The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct...
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote (2006)
Jonathan A. Eisen, Robert S. Coyne, Martin Wu, Dongying Wu, Mathangi Thiagarajan, Jennifer R. Wortman, ...
The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct...
Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters (2006)
Wu, Dongying, Daugherty, Sean C, Van Aken, Susan E, Pai, Grace H, Watkins, Kisha L, Khouri, Hoda, ...
Mutualistic intracellular symbiosis between bacteria and insects is a widespread phenomenon that has contributed to the global success of insects. The symbionts, by provisioning nutrients lacking...
Metabolic Complementarity and Genomics of the Dual Bacterial Symbiosis of Sharpshooters (2006)
Dongying Wu, Sean C. Daugherty, Grace H. Pai, Kisha L. Watkins, Hoda Khouri, ...
Sequence data from two obligate bacterial endosymbionts of an insect--the glassy-winged sharpshooter--suggest there is metabolic co-dependency among them and their insect host.
Metabolic Complementarity and Genomics of the Dual Bacterial Symbiosis of Sharpshooters (2006)
Dongying Wu, Sean C. Daugherty, Grace H. Pai, Kisha L. Watkins, Hoda Khouri, ...
Mutualistic intracellular symbiosis between bacteria and insects is a widespread phenomenon that has contributed to the global success of insects. The symbionts, by provisioning nutrients lacking...
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote (2006)
Eisen, Jonathan A., Coyne, Robert S., Wu, Martin, Wu, Dongying, Thiagarajan, Mathangi, Wortman, Jennifer R., ...
The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct...
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote (2006)
Eisen, Jonathan A., Coyne, Robert S., Wu, Martin, Wu, Dongying, Thiagarajan, Mathangi, Wortman, Jennifer R., ...
The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct...
Haas, Brian J, Wortman, Jennifer R, Ronning, Catherine M, Hannick, Linda I, Smith, Roger K, Maiti, Rama, ...
Abstract Background Since the initial publication of its complete genome sequence, Arabidopsis thaliana has become more important than ever as a model for plant research. However, the initial genome...
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Recovery of YAC-end sequences through complementation of an Escherichia coli pyrF mutation (1997)
David A. Wright, Sei-kyoung Park, Dongying Wu, Gregory J. Phillips, Steven R. Rodermel, Daniel F. Voytas
We have developed a genetic means to recover sequences from YAC-ends near the yeast selectable marker URA3. This strategy is based on the ability of URA3 to complement mutations in pyrF, an...
Aluru, Maneesha R., Bae, Hanhong, Wu, Dongying, Rodermel, Steven R.
The immutans (im) variegation mutant of Arabidopsis has green and white leaf sectors due to the action of a nuclear recessive gene, IMMUTANS (IM). This gene encodes the IM protein, which is a...
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release
Haas, Brian J, Wortman, Jennifer R, Ronning, Catherine M, Hannick, Linda I, Smith, Roger K, Maiti, Rama, ...
Penn, Kevin, Wu, Dongying, Eisen, Jonathan A., Ward, Naomi
Although microbes associated with shallow-water corals have been reported, deepwater coral microbes are poorly characterized. A cultivation-independent analysis of Alaskan seamount octocoral...
Metabolic Complementarity and Genomics of the Dual Bacterial Symbiosis of Sharpshooters
Wu, Dongying, Daugherty, Sean C, Van Aken, Susan E, Pai, Grace H, Watkins, Kisha L, Khouri, Hoda, ...
Mutualistic intracellular symbiosis between bacteria and insects is a widespread phenomenon that has contributed to the global success of insects. The symbionts, by provisioning nutrients lacking...
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote
Eisen, Jonathan A, Coyne, Robert S, Wu, Martin, Wu, Dongying, Thiagarajan, Mathangi, Wortman, Jennifer R, ...
The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct...
Aluru, Maneesha R., Bae, Hanhong, Wu, Dongying, Rodermel, Steven R.
The immutans (im) variegation mutant of Arabidopsis has green and white leaf sectors due to the action of a nuclear recessive gene, IMMUTANS (IM). This gene encodes the IM protein, which is a...
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release
Haas, Brian J, Wortman, Jennifer R, Ronning, Catherine M, Hannick, Linda I, Smith, Roger K, Maiti, Rama, ...
Penn, Kevin, Wu, Dongying, Eisen, Jonathan A., Ward, Naomi
Although microbes associated with shallow-water corals have been reported, deepwater coral microbes are poorly characterized. A cultivation-independent analysis of Alaskan seamount octocoral...
Metabolic Complementarity and Genomics of the Dual Bacterial Symbiosis of Sharpshooters
Wu, Dongying, Daugherty, Sean C, Van Aken, Susan E, Pai, Grace H, Watkins, Kisha L, Khouri, Hoda, ...
Mutualistic intracellular symbiosis between bacteria and insects is a widespread phenomenon that has contributed to the global success of insects. The symbionts, by provisioning nutrients lacking...
Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote
Eisen, Jonathan A, Coyne, Robert S, Wu, Martin, Wu, Dongying, Thiagarajan, Mathangi, Wortman, Jennifer R, ...
The ciliate Tetrahymena thermophila is a model organism for molecular and cellular biology. Like other ciliates, this species has separate germline and soma functions that are embodied by distinct...
Rusch, Douglas B, Halpern, Aaron L, Sutton, Granger, Heidelberg, Karla B, Williamson, Shannon, Yooseph, Shibu, ...
The world's oceans contain a complex mixture of micro-organisms that are for the most part, uncharacterized both genetically and biochemically. We report here a metagenomic study of the marine...
Hazen, Tracy H., Wu, Dongying, Eisen, Jonathan A., Sobecky, Patricia A.
The horizontal transfer of genes by mobile genetic elements such as plasmids and phages can accelerate genome diversification of Vibrio spp., affecting their physiology, pathogenicity, and ecological...
An Automated Phylogenetic Tree-Based Small Subunit rRNA Taxonomy and Alignment Pipeline (STAP)
Wu, Dongying, Hartman, Amber, Ward, Naomi, Eisen, Jonathan A.
Comparative analysis of small-subunit ribosomal RNA (ss-rRNA) gene sequences forms the basis for much of what we know about the phylogenetic diversity of both cultured and uncultured microorganisms....
Complete Genome Sequence of the Aerobic CO-Oxidizing Thermophile Thermomicrobium roseum
Wu, Dongying, Raymond, Jason, Wu, Martin, Chatterji, Sourav, Ren, Qinghu, Graham, Joel E., ...
In order to enrich the phylogenetic diversity represented in the available sequenced bacterial genomes and as part of an “Assembling the Tree of Life” project, we determined the genome sequence...
Campbell, Barbara J., Smith, Julie L., Hanson, Thomas E., Klotz, Martin G., Stein, Lisa Y., Lee, Charles K., ...
Submarine hydrothermal vents are model systems for the Archaean Earth environment, and some sites maintain conditions that may have favored the formation and evolution of cellular life. Vents are...