F. M. Klis

Publication List Details

Period

1992 - 2008

Number

205

Co-Authors

Mass spectrometry-based proteomics of fungal wall glycoproteins (2008)

Yin, Q.Y., Koster, C.G. De, Klis, F.M.

The manifold functions of fungal wall glycoproteins include maintenance of cell wall integrity, homotypic and heterotypic adhesion, biofilm formation, acquisition of iron and sterols, protein...

Hypoxic conditions and iron restriction affect the cell-wall proteome of Candida albicans grown under vagina-simulative conditions (2008)

Sosinska, G.J., Teixeira De Mattos, M.J., Dekker, H.L., Koster, C.G. De, Hellingwerf, K.J., ...

Proteins that are covalently linked to the skeletal polysaccharides of the cell wall of Candida albicans play a major role in the colonization of the vaginal mucosal surface, which may result in...

The cell wall of the human pathogen Candida glabrata: Differential incorporation of novel adhesin-like wall proteins (2008)

Kraneveld, E.A., Yin, Q.Y., Dekker, H.L., Gross, U., Crielaard, W., ...

The cell wall of the human pathogen Candida glabrata governs initial host-pathogen interactions that underlie the establishment of fungal infections. With the aim of identifying species-specific...

A novel screening method for cell wall mutants in Aspergillus niger identifies UDP-galactopyranose mutase as an important protein in fungal cell wall biosynthesis (2008)

Damveld, R.A., Franken, A., Arentshorst, M., Punt, P.J., Klis, F.M., ...

To identify cell wall biosynthetic genes in filamentous fungi and thus potential targets for the discovery of new antifungals, we developed a novel screening method for cell wall mutants. It is based...

The conserved PA14 domain of cell wall-associated fungal adhesins governs their glycan-binding specificity (2008)

Klis, F.M.

Yeast cell wall-associated, lectin-like adhesins form large families that mediate flocculation and host cell recognition. The glycan specificity of individual adhesins is largely unknown. Zupancic et...

Activation of the protein kinase C1 pathway upon continuous heat stress in S.cerevisiae is triggered by an increase in osmolarity due to trehalose accumulation. (2005)

Mensonides, F.I.C., Brul, S., Klis, F.M., Hellingwerf, K.J., Teixeira De Mattos, M.J.

This paper reports on physiological and molecular responses of Saccharomyces cerevisiae to heat stress conditions. We observed that within a very narrow range of culture temperatures, a shift from...

Expression of agsA, one of five 1,3-alpha-D-glucan synthease-encoding genes in Aspergillus niger, is induced in response to cell wall stress. (2005)

Damveld, R.A., Vankuyk, P.A., Arentshorst, M., Klis, F.M., Ram, A.F.

1,3-alpha-D-Glucan is an important component of the cell wall of filamentous fungi. We have identified a family of five 1,3-alpha-D-glucan synthase-encoding genes in Aspergillus niger. The agsA gene...

Granulocytes govern the transcriptional response, morphology and proliferation of Candida albicans in human blood. (2005)

Fradin, C., Maccallum, D., Schaller, M., Klis, F.M., Odds, F.C., ...

Survival in blood and escape from blood vessels into tissues are essential steps for the yeast Candida albicans to cause systemic infections. To elucidate the influence of blood components on fungal...

Features and functions of covalently linked proteins in fungal cell walls. (2005)

Ram, A.F., Klis, F.M.

The cell walls of many ascomycetous yeasts consist of an internal network of stress-bearing polysaccharides, which serve as a scaffold for a dense external layer of glycoproteins. GPI-modified...

T-profiler: scoring the activity of predefined groups of genes using gene expression data. (2005)

Boorsma, A., Foat, B.C., Vis, D.J., Klis, F.M., Bussemaker, H.J.

One of the key challenges in the analysis of gene expression data is how to relate the expression level of individual genes to the underlying transcriptional programs and cellular state. Here we...

The Aspergillus niger MADS-box transcription factor RlmA is required for cell wall reinforcement in response to cell wall stress. (2005)

Damveld, R.A., Arentshorst, M., Franken, A., Vankuyk, P.A., Klis, F.M., ...

In Aspergillus niger, the genes coding for glutamine:fructose-6-phosphate amidotransferase (gfaA) and alpha-1,3-glucan synthase (agsA) are induced in response to cell wall stress. In silico analysis...

The structure of cell wall alpha-glucan from fission yeast. (2005)

Grun, C.H., Hochstenbach, F., Humbel, B.M., Verkleij, A.J., Sietsma, J.H., Klis, F.M., ...

Morphology and structural integrity of fungal cells depend on cell wall polysaccharides. The chemical structure and biosynthesis of two types of these polysaccharides, chitin and...

Transcriptional response of Saccharomyces cerevisiae to the plasma membrane-perturbing compound chitosan. (2005)

Zakrzewska, A.M., Boorsma, A., Brul, S., Hellingwerf, K.J., Klis, F.M.

Chitosan is a plasma membrane-perturbing compound consisting of linear chains of ?-1,4-linked glucosamine residues, which at acidic pHs become positively charged. It is extensively used as an...

CandidaDB: a genome database for Candida albicans pathogenomics (2005)

D'Enfert, C., Goyard, S., Rodriguez-Arnaveilhe, S., Frangeul, L., Jones, L., Tekaia, F., ...

CandidaDB is a database dedicated to the genome of the most prevalent systemic fungal pathogen of humans, Candida albicans. CandidaDB is based on an annotation of the Stanford Genome Technology...

An in vitro assay for (1-->6)-beta-D-glucan synthesis in Saccharomyces cerevisiae. (2004)

Vink, E., Rodriguez-Suarez, R.J., Gerard-Vincent, M., Ribas, J.C., Nobel, J.G. De, Ende, H. Van Den, ...

(1 --> 6)-beta-D-glucan is a key cell wall component of Saccharomyces cerevisiae and Candida albicans. Many genes are known to affect the levels or structure of this glucan, but their roles and a...

Characterization of the transcriptional response to cell wall stress in Saccharomyces cerevisiae. (2004)

Boorsma, A., Nobel, H. De, Riet, B. Ter, Bargmann, B., Brul, S., Hellingwerf, K.J., ...

The cell wall perturbants Calcofluor white and Zymolyase activate the Pkc1-Rho1-controlled Slt2p MAP kinase pathway in Saccharomyces cerevisiae. A downstream transcription factor of this pathway,...

Specific Cell Wall Proteins Confer Resistance to Nisin upon Yeast Cells

Dielbandhoesing, S. K., Zhang, H., Caro, L. H. P., Van Der Vaart, J. M., Klis, F. M., Verrips, C. T., ...

The cell wall of a yeast cell forms a barrier for various proteinaceous and nonproteinaceous molecules. Nisin, a small polypeptide and a well-known preservative active against gram-positive bacteria,...

Comparison of cell wall proteins of Saccharomyces cerevisiae as anchors for cell surface expression of heterologous proteins.

Van Der Vaart, J M, Te Biesebeke, R, Chapman, J W, Toschka, H Y, Klis, F M, Verrips, C T

The carboxyl-terminal regions of five cell wall proteins (Cwp1p, Cwp2p, Ag alpha 1p, Tip1p, and Flo1p) and three potential cell wall proteins (Sed1p, YCR89w, and Tir1p) all proved capable of...

Identification of three mannoproteins in the cell wall of Saccharomyces cerevisiae.

Van Der Vaart, J M, Caro, L H, Chapman, J W, Klis, F M, Verrips, C T

Three glucanase-extractable cell wall proteins from Saccharomyces cerevisiae were purified, and their N-terminal amino acid sequences were determined. With this information, we were able to assign...

Covalent association of beta-1,3-glucan with beta-1,6-glucosylated mannoproteins in cell walls of Candida albicans.

Kapteyn, J C, Montijn, R C, Dijkgraaf, G J, Klis, F M

Yeast and hyphal walls of Candida albicans were extracted with sodium dodecyl sulfate (SDS). Some of the extracted proteins reacted with a specific beta-1,6-glucan antiserum but not with a...

CWH41 encodes a novel endoplasmic reticulum membrane N-glycoprotein involved in beta 1,6-glucan assembly.

Jiang, B, Sheraton, J, Ram, A F, Dijkgraaf, G J, Klis, F M, Bussey, H

CWH41 encodes a novel type II integral membrane N-glycoprotein located in the endoplasmic reticulum. Disruption of the CWH41 gene leads to a K1 killer toxin-resistant phenotype and a 50% reduction in...

Restrictive glycosylphosphatidylinositol anchor synthesis in cwh6/gpi3 yeast cells causes aberrant biogenesis of cell wall proteins.

Vossen, J H, Müller, W H, Lipke, P N, Klis, F M

We previously reported that the defects in the Saccharomyces cerevisiae cwh6 Calcofluor white-hypersensitive cell wall mutant are caused by a mutation in SPT14/GPI3, a gene involved in...

Altered extent of cross-linking of beta1,6-glucosylated mannoproteins to chitin in Saccharomyces cerevisiae mutants with reduced cell wall beta1,3-glucan content.

Kapteyn, J C, Ram, A F, Groos, E M, Kollar, R, Montijn, R C, ...

The yeast cell wall contains beta1,3-glucanase-extractable and beta1,3-glucanase-resistant mannoproteins. The beta1,3-glucanase-extractable proteins are retained in the cell wall by attachment to a...

CandidaDB: a genome database for Candida albicans pathogenomics

D'Enfert, C., Goyard, S., Rodriguez-Arnaveilhe, S., Frangeul, L., Jones, L., Tekaia, F., ...

CandidaDB is a database dedicated to the genome of the most prevalent systemic fungal pathogen of humans, Candida albicans. CandidaDB is based on an annotation of the Stanford Genome Technology...

Large Scale Identification of Genes Involved in Cell Surface Biosynthesis and Architecture in Saccharomyces Cerevisiae

Lussier, M., White, A. M., Sheraton, J., Di-Paolo, T., Treadwell, J., Southard, S. B., ...

The sequenced yeast genome offers a unique resource for the analysis of eukaryotic cell function and enables genome-wide screens for genes involved in cellular processes. We have identified genes...

Characterization of agglutinin-like sequence genes from non-albicans Candida and phylogenetic analysis of the ALS family.

Hoyer, L L, Fundyga, R, Hecht, J E, Kapteyn, J C, Klis, F M, Arnold, J

The ALS (agglutinin-like sequence) gene family of Candida albicans encodes cell-surface glycoproteins implicated in adhesion of the organism to host surfaces. Southern blot analysis with ALS-specific...

Specific Cell Wall Proteins Confer Resistance to Nisin upon Yeast Cells

Dielbandhoesing, S. K., Zhang, H., Caro, L. H. P., Van Der Vaart, J. M., Klis, F. M., Verrips, C. T., ...

The cell wall of a yeast cell forms a barrier for various proteinaceous and nonproteinaceous molecules. Nisin, a small polypeptide and a well-known preservative active against gram-positive bacteria,...

Comparison of cell wall proteins of Saccharomyces cerevisiae as anchors for cell surface expression of heterologous proteins.

Van Der Vaart, J M, Te Biesebeke, R, Chapman, J W, Toschka, H Y, Klis, F M, Verrips, C T

The carboxyl-terminal regions of five cell wall proteins (Cwp1p, Cwp2p, Ag alpha 1p, Tip1p, and Flo1p) and three potential cell wall proteins (Sed1p, YCR89w, and Tir1p) all proved capable of...

Identification of three mannoproteins in the cell wall of Saccharomyces cerevisiae.

Van Der Vaart, J M, Caro, L H, Chapman, J W, Klis, F M, Verrips, C T

Three glucanase-extractable cell wall proteins from Saccharomyces cerevisiae were purified, and their N-terminal amino acid sequences were determined. With this information, we were able to assign...

Covalent association of beta-1,3-glucan with beta-1,6-glucosylated mannoproteins in cell walls of Candida albicans.

Kapteyn, J C, Montijn, R C, Dijkgraaf, G J, Klis, F M

Yeast and hyphal walls of Candida albicans were extracted with sodium dodecyl sulfate (SDS). Some of the extracted proteins reacted with a specific beta-1,6-glucan antiserum but not with a...

CWH41 encodes a novel endoplasmic reticulum membrane N-glycoprotein involved in beta 1,6-glucan assembly.

Jiang, B, Sheraton, J, Ram, A F, Dijkgraaf, G J, Klis, F M, Bussey, H

CWH41 encodes a novel type II integral membrane N-glycoprotein located in the endoplasmic reticulum. Disruption of the CWH41 gene leads to a K1 killer toxin-resistant phenotype and a 50% reduction in...

Restrictive glycosylphosphatidylinositol anchor synthesis in cwh6/gpi3 yeast cells causes aberrant biogenesis of cell wall proteins.

Vossen, J H, Müller, W H, Lipke, P N, Klis, F M

We previously reported that the defects in the Saccharomyces cerevisiae cwh6 Calcofluor white-hypersensitive cell wall mutant are caused by a mutation in SPT14/GPI3, a gene involved in...

Altered extent of cross-linking of beta1,6-glucosylated mannoproteins to chitin in Saccharomyces cerevisiae mutants with reduced cell wall beta1,3-glucan content.

Kapteyn, J C, Ram, A F, Groos, E M, Kollar, R, Montijn, R C, ...

The yeast cell wall contains beta1,3-glucanase-extractable and beta1,3-glucanase-resistant mannoproteins. The beta1,3-glucanase-extractable proteins are retained in the cell wall by attachment to a...

CandidaDB: a genome database for Candida albicans pathogenomics

D'Enfert, C., Goyard, S., Rodriguez-Arnaveilhe, S., Frangeul, L., Jones, L., Tekaia, F., ...

CandidaDB is a database dedicated to the genome of the most prevalent systemic fungal pathogen of humans, Candida albicans. CandidaDB is based on an annotation of the Stanford Genome Technology...

Large Scale Identification of Genes Involved in Cell Surface Biosynthesis and Architecture in Saccharomyces Cerevisiae

Lussier, M., White, A. M., Sheraton, J., Di-Paolo, T., Treadwell, J., Southard, S. B., ...

The sequenced yeast genome offers a unique resource for the analysis of eukaryotic cell function and enables genome-wide screens for genes involved in cellular processes. We have identified genes...

Characterization of agglutinin-like sequence genes from non-albicans Candida and phylogenetic analysis of the ALS family.

Hoyer, L L, Fundyga, R, Hecht, J E, Kapteyn, J C, Klis, F M, Arnold, J

The ALS (agglutinin-like sequence) gene family of Candida albicans encodes cell-surface glycoproteins implicated in adhesion of the organism to host surfaces. Southern blot analysis with ALS-specific...