Improving the specificity of high-throughput ortholog prediction (2006)
Fulton, Debra L, Li, Yvonne Y, Laird, Matthew R, Horsman, Benjamin GS, Roche, Fiona M, Brinkman, Fiona SL
Abstract Background Orthologs (genes that have diverged after a speciation event) tend to have similar function, and so their prediction has become an important component of comparative genomics and...
Debra L Fulton, Yvonne Y Li, Matthew R Laird, Benjamin Gs Horsman, Fiona M Roche, Fiona Sl Brinkman
This is an Open Access article distributed under the terms of the Creative Commons Attribution License
ArrayPipe: a flexible processing pipeline for microarray data (2004)
Karsten Hokamp, Fiona M. Roche, Michael Acab, Marc-etienne Rousseau, Byron Kuo, David Goode, ...
A number of microarray analysis software packages exist already; however, none combines the userfriendly features of a web-based interface with potential ability to analyse multiple arrays at once...
microarray probes to genes (2004)
Fiona M. Roche, Karsten Hokamp, Michael Acab, Lorne A. Babiuk
ProbeLynx: a tool for updating the association of
ArrayPipe: a flexible processing pipeline for microarray data (2004)
Hokamp, Karsten, Roche, Fiona M., Acab, Michael, Rousseau, Marc-Etienne, Kuo, Byron, Goode, David, ...
A number of microarray analysis software packages exist already; however, none combines the user-friendly features of a web-based interface with potential ability to analyse multiple arrays at once...
ProbeLynx: a tool for updating the association of microarray probes to genes (2004)
Roche, Fiona M., Hokamp, Karsten, Acab, Michael, Babiuk, Lorne A., Hancock, Robert E. W., Brinkman, Fiona S. L.
As genome sequence data and gene prediction improve, probes developed for a given microarray experiment should be continuously re-evaluated for their specificity for given genes....
ArrayPipe: a flexible processing pipeline for microarray data
Hokamp, Karsten, Roche, Fiona M., Acab, Michael, Rousseau, Marc-Etienne, Kuo, Byron, Goode, David, ...
A number of microarray analysis software packages exist already; however, none combines the user-friendly features of a web-based interface with potential ability to analyse multiple arrays at once...
ProbeLynx: a tool for updating the association of microarray probes to genes
Roche, Fiona M., Hokamp, Karsten, Acab, Michael, Babiuk, Lorne A., Hancock, Robert E. W., Brinkman, Fiona S. L.
As genome sequence data and gene prediction improve, probes developed for a given microarray experiment should be continuously re-evaluated for their specificity for given genes....
Improving the specificity of high-throughput ortholog prediction
Fulton, Debra L, Li, Yvonne Y, Laird, Matthew R, Horsman, Benjamin GS, Roche, Fiona M, Brinkman, Fiona SL
ArrayPipe: a flexible processing pipeline for microarray data
Hokamp, Karsten, Roche, Fiona M., Acab, Michael, Rousseau, Marc-Etienne, Kuo, Byron, Goode, David, ...
A number of microarray analysis software packages exist already; however, none combines the user-friendly features of a web-based interface with potential ability to analyse multiple arrays at once...
ProbeLynx: a tool for updating the association of microarray probes to genes
Roche, Fiona M., Hokamp, Karsten, Acab, Michael, Babiuk, Lorne A., Hancock, Robert E. W., Brinkman, Fiona S. L.
As genome sequence data and gene prediction improve, probes developed for a given microarray experiment should be continuously re-evaluated for their specificity for given genes....
Improving the specificity of high-throughput ortholog prediction
Fulton, Debra L, Li, Yvonne Y, Laird, Matthew R, Horsman, Benjamin GS, Roche, Fiona M, Brinkman, Fiona SL
InnateDB: facilitating systems-level analyses of the mammalian innate immune response
Lynn, David J, Winsor, Geoffrey L, Chan, Calvin, Richard, Nicolas, Laird, Matthew R, Barsky, Aaron, ...
Although considerable progress has been made in dissecting the signaling pathways involved in the innate immune response, it is now apparent that this response can no longer be productively thought...