Heesun Shin

Publication List Details

Period

1990 - 2008

Number

18

Co-Authors

Transcriptome analysis for Caenorhabditis elegansbased on novel expressed sequence tags (2008)

Shin, Heesun, Hirst, Martin, Bainbridge, Matthew N, Magrini, Vincent, Mardis, Elaine, Moerman, Donald G, ...

Abstract Background We have applied a high-throughput pyrosequencing technology for transcriptome profiling of Caenorhabditis elegans in its first larval stage. Using this approach, we have generated...

A BAC-based physical map of the Drosophila buzzatii genome (2005)

Gonzalez, Josefa, Nefedov, Michael, Bosdet, Ian, Casals, Ferran, Calvete, Oriol, Delprat, Alejandra, ...

Large-insert genomic libraries facilitate cloning of large genomic regions, allow the construction of clone-based physical maps and provide useful resources for sequencing entire genomes. Drosophila...

Integrated and sequence-ordered BAC and YAC-based physical maps for the rat genome (2004)

Krzywinski,Martin, Wallis,John, Goesele,Claudia, Bosdet,Ian, Chiu,Readman, Graves,Tina, ...

As part of the effort to sequence the genome of Rattus norvegicus, we constructed a physical map comprised of fingerprinted bacterial artificial chromosome (BAC) clones from the CHORI-230 BAC...

Integrated and sequence-ordered BAC and YAC-based physical maps for the rat genome (2004)

Krzywinski,Martin, Wallis,John, Goesele,Claaudia, Bosdet,Ian, Chiu,Readman, Graves,Tina, ...

As part of the effort to sequence the genome of Rattus norvegicus, we constructed a physical map comprised of fingerprinted bacterial artificial chromosome (BAC) clones from the CHORI-230 BAC...

Integrated and sequence-ordered BAC and YAC-based physical maps for the rat genome (2004)

Krzywinski, Martin, Wallis, John, Goesele, Claaudia, Bosdet, Ian, Chiu, Readman, Graves, Tina, ...

As part of the effort to sequence the genome of Rattus norvegicus, we constructed a physical map comprised of fingerprinted bacterial artificial chromosome (BAC) clones from the CHORI-230 BAC...

Integrated and sequence-ordered BAC and YAC-based physical maps for the rat genome (2004)

Krzywinski, Martin, Wallis, John, Goesele, Claudia, Bosdet, Ian, Chiu, Readman, Graves, Tina, ...

As part of the effort to sequence the genome of Rattus norvegicus, we constructed a physical map comprised of fingerprinted bacterial artificial chromosome (BAC) clones from the CHORI-230 BAC...

Physical Maps for Genome Analysis of Serotype A and D Strains of the Fungal Pathogen Cryptococcus neoformans

Schein, Jacqueline E., Tangen, Kristin L., Chiu, Readman, Shin, Heesun, Lengeler, Klaus B., MacDonald, William Kim, ...

The basidiomycete fungus Cryptococcus neoformans is an important opportunistic pathogen of humans that poses a significant threat to immunocompromised individuals. Isolates of C. neoformans are...

Integrated and Sequence-Ordered BAC- and YAC-Based Physical Maps for the Rat Genome

Krzywinski, Martin, Wallis, John, Gösele, Claudia, Bosdet, Ian, Chiu, Readman, Graves, Tina, ...

As part of the effort to sequence the genome of Rattus norvegicus, we constructed a physical map comprised of fingerprinted bacterial artificial chromosome (BAC) clones from the CHORI-230 BAC...

Functional Characterization of a Catabolic Plasmid from Polychlorinated- Biphenyl-Degrading Rhodococcus sp. Strain RHA1† ‡

Warren, René, Hsiao, William W. L., Kudo, Hisashi, Myhre, Matt, Dosanjh, Manisha, Petrescu, Anca, ...

Rhodococcus sp. strain RHA1, a potent polychlorinated-biphenyl (PCB)-degrading strain, contains three linear plasmids ranging in size from 330 to 1,100 kb. As part of a genome sequencing project, we...

A BAC-based physical map of the Drosophila buzzatii genome

González, Josefa, Nefedov, Michael, Bosdet, Ian, Casals, Ferran, Calvete, Oriol, Delprat, Alejandra, ...

Large-insert genomic libraries facilitate cloning of large genomic regions, allow the construction of clone-based physical maps, and provide useful resources for sequencing entire genomes. Drosophila...

Physical Maps for Genome Analysis of Serotype A and D Strains of the Fungal Pathogen Cryptococcus neoformans

Schein, Jacqueline E., Tangen, Kristin L., Chiu, Readman, Shin, Heesun, Lengeler, Klaus B., MacDonald, William Kim, ...

The basidiomycete fungus Cryptococcus neoformans is an important opportunistic pathogen of humans that poses a significant threat to immunocompromised individuals. Isolates of C. neoformans are...

Integrated and Sequence-Ordered BAC- and YAC-Based Physical Maps for the Rat Genome

Krzywinski, Martin, Wallis, John, Gösele, Claudia, Bosdet, Ian, Chiu, Readman, Graves, Tina, ...

As part of the effort to sequence the genome of Rattus norvegicus, we constructed a physical map comprised of fingerprinted bacterial artificial chromosome (BAC) clones from the CHORI-230 BAC...

Functional Characterization of a Catabolic Plasmid from Polychlorinated- Biphenyl-Degrading Rhodococcus sp. Strain RHA1† ‡

Warren, René, Hsiao, William W. L., Kudo, Hisashi, Myhre, Matt, Dosanjh, Manisha, Petrescu, Anca, ...

Rhodococcus sp. strain RHA1, a potent polychlorinated-biphenyl (PCB)-degrading strain, contains three linear plasmids ranging in size from 330 to 1,100 kb. As part of a genome sequencing project, we...

A BAC-based physical map of the Drosophila buzzatii genome

González, Josefa, Nefedov, Michael, Bosdet, Ian, Casals, Ferran, Calvete, Oriol, Delprat, Alejandra, ...

Large-insert genomic libraries facilitate cloning of large genomic regions, allow the construction of clone-based physical maps, and provide useful resources for sequencing entire genomes. Drosophila...

The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse

McLeod, Michael P., Warren, René L., Hsiao, William W. L., Araki, Naoto, Myhre, Matthew, Fernandes, Clinton, ...

Rhodococcus sp. RHA1 (RHA1) is a potent polychlorinated biphenyl-degrading soil actinomycete that catabolizes a wide range of compounds and represents a genus of considerable industrial interest....