J. Jurka

Publication List Details

Period

2004 - 2005

Number

23

Co-Authors

Enhanced malignant transformation induced by expression of a distinct protein domain of ribonucleotide reductase large subunit from herpes simplex virus type 2.

Ali, M A, McWeeney, D, Milosavljevic, A, Jurka, J, Jariwalla, R J

The 1.3-kilobase (kb) Pst I DNA fragment C (Pst I-C) of herpes simplex virus type 2 (HSV-2) morphological transforming region III (mtrIII; map unit 0.562-0.570) encodes part of the N-terminal half of...

Gene density over the chromosome of Escherichia coli: frequency distribution, spatial clustering, and symmetry.

Jurka, J, Savageau, M A

Published studies of gene density (the number of genetic loci per unit of length on the linkage map) for Escherichia coli report a nonrandom frequency distribution and indicate notable symmetry in...

A fundamental division in the Alu family of repeated sequences.

Jurka, J, Smith, T

The Alu family of repeated sequences from the human genome contains two distinct subfamilies. This division is based on different base preferences in a number of diagnostic sequence positions. One...

Ubiquitous mammalian-wide interspersed repeats (MIRs) are molecular fossils from the mesozoic era.

Jurka, J, Zietkiewicz, E, Labuda, D

Short interspersed elements (SINEs) are ubiquitous in mammalian genomes. Remarkable variety of these repeats among placental orders indicates that most of them amplified in each lineage...

Identification and characterization of new human medium reiteration frequency repeats.

Jurka, J, Kaplan, D J, Duncan, C H, Walichiewicz, J, Milosavljevic, A, Murali, G, ...

We report nine new families of human medium reiteration frequency interspersed repetitive elements (MER elements). They were identified by computer-assisted analyses. Six of them were independently...

A young Alu subfamily amplified independently in human and African great apes lineages.

Zietkiewicz, E, Richer, C, Makalowski, W, Jurka, J, Labuda, D

A variety of Alu subfamilies amplified in primate genomes at different evolutionary time periods. Alu Sb2 belongs to a group of young subfamilies with a characteristic two-nucleotide deletion at...

Medium reiteration frequency repetitive sequences in the human genome.

Kaplan, D J, Jurka, J, Solus, J F, Duncan, C H

Fourteen novel medium reiteration frequency (MER) families were found, in the human genome, by using two different methods. Repetition frequencies per haploid human genome were estimated for each of...

Novel families of interspersed repetitive elements from the human genome.

Jurka, J

Six novel families of interspersed repetitive elements have been detected in the available human DNA sequences using computer-assisted analyses. The estimated total number of elements in the reported...

Enhanced malignant transformation induced by expression of a distinct protein domain of ribonucleotide reductase large subunit from herpes simplex virus type 2.

Ali, M A, McWeeney, D, Milosavljevic, A, Jurka, J, Jariwalla, R J

The 1.3-kilobase (kb) Pst I DNA fragment C (Pst I-C) of herpes simplex virus type 2 (HSV-2) morphological transforming region III (mtrIII; map unit 0.562-0.570) encodes part of the N-terminal half of...

Gene density over the chromosome of Escherichia coli: frequency distribution, spatial clustering, and symmetry.

Jurka, J, Savageau, M A

Published studies of gene density (the number of genetic loci per unit of length on the linkage map) for Escherichia coli report a nonrandom frequency distribution and indicate notable symmetry in...

A fundamental division in the Alu family of repeated sequences.

Jurka, J, Smith, T

The Alu family of repeated sequences from the human genome contains two distinct subfamilies. This division is based on different base preferences in a number of diagnostic sequence positions. One...

Ubiquitous mammalian-wide interspersed repeats (MIRs) are molecular fossils from the mesozoic era.

Jurka, J, Zietkiewicz, E, Labuda, D

Short interspersed elements (SINEs) are ubiquitous in mammalian genomes. Remarkable variety of these repeats among placental orders indicates that most of them amplified in each lineage...

Identification and characterization of new human medium reiteration frequency repeats.

Jurka, J, Kaplan, D J, Duncan, C H, Walichiewicz, J, Milosavljevic, A, Murali, G, ...

We report nine new families of human medium reiteration frequency interspersed repetitive elements (MER elements). They were identified by computer-assisted analyses. Six of them were independently...

A young Alu subfamily amplified independently in human and African great apes lineages.

Zietkiewicz, E, Richer, C, Makalowski, W, Jurka, J, Labuda, D

A variety of Alu subfamilies amplified in primate genomes at different evolutionary time periods. Alu Sb2 belongs to a group of young subfamilies with a characteristic two-nucleotide deletion at...

Medium reiteration frequency repetitive sequences in the human genome.

Kaplan, D J, Jurka, J, Solus, J F, Duncan, C H

Fourteen novel medium reiteration frequency (MER) families were found, in the human genome, by using two different methods. Repetition frequencies per haploid human genome were estimated for each of...

Novel families of interspersed repetitive elements from the human genome.

Jurka, J

Six novel families of interspersed repetitive elements have been detected in the available human DNA sequences using computer-assisted analyses. The estimated total number of elements in the reported...