Target prediction for small, noncoding RNAs in bacteria (2006)
Tjaden, Brian, Goodwin, Sarah S., Opdyke, Jason A., Guillier, Maude, Fu, Daniel X., Gottesman, Susan, ...
Many small, noncoding RNAs in bacteria act as post-transcriptional regulators by basepairing with target mRNAs. While the number of characterized small RNAs (sRNAs) has steadily increased, only a...
Target prediction for small, noncoding RNAs in bacteria (2006)
Tjaden, Brian, Goodwin, Sarah S., Opdyke, Jason A., Guillier, Maude, Fu, Daniel X., Gottesman, Susan, ...
Many small, noncoding RNAs in bacteria act as post-transcriptional regulators by basepairing with target mRNAs. While the number of characterized small RNAs (sRNAs) has steadily increased, only a...
A Region of ςK Involved in Promoter Activation by GerE in Bacillus subtilis
Wade, Kathryn H., Schyns, Ghislain, Opdyke, Jason A., Moran, Charles P.
During endospore formation in Bacillus subtilis, the DNA binding protein GerE stimulates transcription from several promoters that are used by RNA polymerase containing ςK. GerE binds to a site on...
Copy Number of Pilus Gene Clusters in Haemophilus influenzae and Variation in the hifE Pilin Gene
Read, Timothy D., Satola, Sarah W., Opdyke, Jason A., Farley, Monica M.
Brazilian purpuric fever (BPF)-associated Haemophilus influenzae biogroup aegyptius strain F3031 contains two identical copies of a five gene cluster (hifA to hifE) encoding pili similar to...
Expression of the Secondary Sigma Factor σX in Streptococcus pyogenes Is Restricted at Two Levels
Opdyke, Jason A., Scott, June R.
Secondary RNA polymerase sigma factors in many bacteria are responsible for regulating a vast range of processes including virulence. A protein (σX) in the gram-positive human pathogen Streptococcus...
GadY, a Small-RNA Regulator of Acid Response Genes in Escherichia coli
Opdyke, Jason A., Kang, Ju-Gyeong, Storz, Gisela
A previous bioinformatics-based search for small RNAs in Escherichia coli identified a novel RNA named IS183. The gene encoding this small RNA is located between and on the opposite strand of genes...
Target prediction for small, noncoding RNAs in bacteria
Tjaden, Brian, Goodwin, Sarah S., Opdyke, Jason A., Guillier, Maude, Fu, Daniel X., Gottesman, Susan, ...
Many small, noncoding RNAs in bacteria act as post-transcriptional regulators by basepairing with target mRNAs. While the number of characterized small RNAs (sRNAs) has steadily increased, only a...
A Region of ςK Involved in Promoter Activation by GerE in Bacillus subtilis
Wade, Kathryn H., Schyns, Ghislain, Opdyke, Jason A., Moran, Charles P.
During endospore formation in Bacillus subtilis, the DNA binding protein GerE stimulates transcription from several promoters that are used by RNA polymerase containing ςK. GerE binds to a site on...
Copy Number of Pilus Gene Clusters in Haemophilus influenzae and Variation in the hifE Pilin Gene
Read, Timothy D., Satola, Sarah W., Opdyke, Jason A., Farley, Monica M.
Brazilian purpuric fever (BPF)-associated Haemophilus influenzae biogroup aegyptius strain F3031 contains two identical copies of a five gene cluster (hifA to hifE) encoding pili similar to...
Expression of the Secondary Sigma Factor σX in Streptococcus pyogenes Is Restricted at Two Levels
Opdyke, Jason A., Scott, June R.
Secondary RNA polymerase sigma factors in many bacteria are responsible for regulating a vast range of processes including virulence. A protein (σX) in the gram-positive human pathogen Streptococcus...
GadY, a Small-RNA Regulator of Acid Response Genes in Escherichia coli
Opdyke, Jason A., Kang, Ju-Gyeong, Storz, Gisela
A previous bioinformatics-based search for small RNAs in Escherichia coli identified a novel RNA named IS183. The gene encoding this small RNA is located between and on the opposite strand of genes...
Target prediction for small, noncoding RNAs in bacteria
Tjaden, Brian, Goodwin, Sarah S., Opdyke, Jason A., Guillier, Maude, Fu, Daniel X., Gottesman, Susan, ...
Many small, noncoding RNAs in bacteria act as post-transcriptional regulators by basepairing with target mRNAs. While the number of characterized small RNAs (sRNAs) has steadily increased, only a...
Wang, Xunde, Mukhopadhyay, Partha, Wood, Matthew J., Outten, F. Wayne, Opdyke, Jason A., Storz, Gisela
The OxyR transcription factor is a key regulator of the Escherichia coli response to oxidative stress. Previous studies showed that OxyR binding to a target promoter enhances RNA polymerase binding...