Jayaraman Seetharaman

Publication List Details

Period

2006 - 2007

Number

8

Co-Authors

Crystal structure of AGR_C_4470p from Agrobacterium tumefaciens (2007)

Vorobiev, Sergey M., Neely, Helen, Seetharaman, Jayaraman, Ma, Li-Chung, Xiao, Rong, Acton, Thomas B., ...

We report here the crystal structure at 2.0 Å resolution of the AGR_C_4470p protein from the Gram-negative bacterium Agrobacterium tumefaciens. The protein is a tightly associated dimer, each...

Crystal structure of trehalose-6-phosphate phosphatase-related protein: Biochemical and biological implications (2006)

Rao, Krishnamurthy N., Kumaran, Desigan, Seetharaman, Jayaraman, Bonanno, Jeffrey B., Burley, Stephen K., Swaminathan, Subramanyam

We report here the crystal structure of a trehalose-6-phosphate phosphatase–related protein (T6PP) from Thermoplasma acidophilum, TA1209, determined by the dual-wavelength anomalous diffraction...

Molecular insights into substrate recognition and catalysis by tryptophan 2,3-dioxygenase

Forouhar, Farhad, Anderson, J. L. Ross, Mowat, Christopher G., Vorobiev, Sergey M., Hussain, Arif, Abashidze, Mariam, ...

Tryptophan 2,3-dioxygenase (TDO) and indoleamine 2,3-dioxygenase (IDO) constitute an important, yet relatively poorly understood, family of heme-containing enzymes. Here, we report extensive...

Crystal structure of AGR_C_4470p from Agrobacterium tumefaciens

Vorobiev, Sergey M., Neely, Helen, Seetharaman, Jayaraman, Ma, Li-Chung, Xiao, Rong, Acton, Thomas B., ...

We report here the crystal structure at 2.0 Å resolution of the AGR_C_4470p protein from the Gram-negative bacterium Agrobacterium tumefaciens. The protein is a tightly associated dimer, each...

Crystal structure of trehalose-6-phosphate phosphatase–related protein: Biochemical and biological implications

Rao, Krishnamurthy N., Kumaran, Desigan, Seetharaman, Jayaraman, Bonanno, Jeffrey B., Burley, Stephen K., Swaminathan, Subramanyam

We report here the crystal structure of a trehalose-6-phosphate phosphatase–related protein (T6PP) from Thermoplasma acidophilum, TA1209, determined by the dual-wavelength anomalous diffraction...

The structural basis of cyclic diguanylate signal transduction by PilZ domains

Benach, Jordi, Swaminathan, Swarup S, Tamayo, Rita, Handelman, Samuel K, Folta-Stogniew, Ewa, Ramos, John E, ...

The second messenger cyclic diguanylate (c-di-GMP) controls the transition between motile and sessile growth in eubacteria, but little is known about the proteins that sense its concentration....

Quantum chemical 13Cα chemical shift calculations for protein NMR structure determination, refinement, and validation

Vila, Jorge A., Aramini, James M., Rossi, Paolo, Kuzin, Alexandre, Su, Min, Seetharaman, Jayaraman, ...

A recently determined set of 20 NMR-derived conformations of a 48-residue all-α-helical protein, (PDB ID code 2JVD), is validated here by comparing the observed 13Cα chemical shifts with those...

Molecular Insights into the Biosynthesis of the F420 Coenzyme*

Forouhar, Farhad, Abashidze, Mariam, Xu, Huimin, Grochowski, Laura L., Seetharaman, Jayaraman, Hussain, Munif, ...

Coenzyme F420, a hydride carrier, is found in Archaea and some bacteria and has crucial roles in methanogenesis, antibiotic biosynthesis, DNA repair, and activation of antitubercular compounds. CofD,...