Design and directed evolution of a dideoxy purine nucleoside phosphorylase (2010)
Nannemann, David P., Kaufmann, Kristian W., Meiler, Jens, Bachmann, Brian O.
Purine nucleoside phosphorylase (PNP) catalyzes the synthesis and phosphorolysis of purine nucleosides, interconverting nucleosides with their corresponding purine base and ribose-1-phosphate. While...
ABSTRACT We describe predictions of the (2008)
Philip Bradley, Dylan Chivian, Jens Meiler, Kira M. S. Misura, Carol A. Rohl, William R. Schief, ...
structures of CASP5 targets using Rosetta. The Rosetta fragment insertion protocol was used to generate models for entire target domains without detectable sequence similarity to a protein of known...
Access the most recent version at doi: 10.1110/ps.062353106 References (2006)
Re Zanghellini, Lin Jiang, Andrew M. Wollacott, Gong Cheng, Jens Meiler, Eric A. Althoff, ...
New algorithms and an in silico benchmark for computational
Re Zanghellini, Lin Jiang, Andrew M. Wollacott, Gong Cheng, Jens Meiler, Eric A. Althoff, ...
New algorithms and an in silico benchmark for computational
New algorithms and an in silico benchmark for computational enzyme design (2006)
Zanghellini, Alexandre, Jiang, Lin, Wollacott, Andrew M., Cheng, Gong, Meiler, Jens, Althoff, Eric A., ...
The creation of novel enzymes capable of catalyzing any desired chemical reaction is a grand challenge for computational protein design. Here we describe two new algorithms for enzyme design that...
D: Strand-loop-strand motifs: Prediction of hairpins and diverging turns in proteins (2004)
Michael Kuhn, Jens Meiler, David Baker
ABSTRACT �-sheet proteins have been particularly challenging for de novo structure prediction methods, which tend to pair adjacent �-strands into �-hairpins and produce overly local topologies....
Abstract Communication The fumarate sensor DcuS (2004)
progress in rapid protein fold elucidation by combining protein structure prediction methods with NMR spectroscopy
Ranking MOLGEN Structure Proposals by 13 C NMR Chemical Shift Prediction with ANALYZE (2002)
86 Artificial neural networks are capable of predicting the 13 C chemical shifts of organic molecules nearly as fast as incremental methods while maintaining the accuracy of database methods. In this...
Frankfurt (Main), Univ., Diss., 2001.
Frankfurt (Main), Univ., Diss., 2001.
New algorithms and an in silico benchmark for computational enzyme design
Zanghellini, Alexandre, Jiang, Lin, Wollacott, Andrew M., Cheng, Gong, Meiler, Jens, Althoff, Eric A., ...
The creation of novel enzymes capable of catalyzing any desired chemical reaction is a grand challenge for computational protein design. Here we describe two new algorithms for enzyme design that...
Lakomek, Nils-Alexander, Walter, Korvin F.A., Farès, Christophe, Lange, Oliver F., De Groot, Bert L., Grubmüller, Helmut, ...
Residual dipolar couplings (RDCs) provide information about the dynamic average orientation of inter-nuclear vectors and amplitudes of motion up to milliseconds. They complement relaxation methods,...
Friedland, Gregory D., Lakomek, Nils-Alexander, Griesinger, Christian, Meiler, Jens, Kortemme, Tanja
Conformational ensembles are increasingly recognized as a useful representation to describe fundamental relationships between protein structure, dynamics and function. Here we present an ensemble of...
Accessing ns–μs side chain dynamics in ubiquitin with methyl RDCs
Farès, Christophe, Lakomek, Nils-Alexander, Walter, Korvin F. A., Frank, Benedikt T. C., Meiler, Jens, Becker, Stefan, ...
This study presents the first application of the model-free analysis (MFA) (Meiler in J Am Chem Soc 123:6098–6107, 2001; Lakomek in J Biomol NMR 34:101–115, 2006) to methyl group RDCs measured in...
Practically Useful: What the Rosetta Protein Modeling Suite Can Do for You
Kaufmann, Kristian W., Lemmon, Gordon H., DeLuca, Samuel L., Sheehan, Jonathan H., Meiler, Jens
Mueller, Ralf, Rodriguez, Alice L., Dawson, Eric S., Butkiewicz, Mariusz, Nguyen, Thuy T., Oleszkiewicz, Stephen, ...
The evolutionarily conserved residue A653 plays a key role in HERG channel closing
Stepanovic, Svetlana Z, Potet, Franck, Petersen, Christina I, Smith, Jarrod A, Meiler, Jens, Balser, Jeffrey R, ...
Human ether-a-go-go-related gene (HERG) encodes the rapid, outwardly rectifying K+ current IKr that is critical for repolarization of the cardiac action potential. Congenital HERG mutations or...