John A. Miller

GlycoBrowser: A Tool for Contextual Visualization of Biological Data and Pathways Using Ontologies* (2009)

Matthew Eavenson, Maciej Janik, Shravya Nimmagadda, John A. Miller, Krys J. Kochut, William S. York

Abstract. This paper introduces GlycoBrowser, a dynamic biological pathway exploration and visualization tool. Its capabilities include incremental navigation of pathways, as well as overlaying...

GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis (2009)

Aurrecoechea, Cristina, Brestelli, John, Brunk, Brian P., Carlton, Jane M., Dommer, Jennifer, Fischer, Steve, ...

GiardiaDB (http://GiardiaDB.org) and TrichDB (http://TrichDB.org) house the genome databases for Giardia lamblia and Trichomonas vaginalis, respectively, and represent the latest additions to the...

PlasmoDB: a functional genomic database for malaria parasites (2009)

Aurrecoechea, Cristina, Brestelli, John, Brunk, Brian P., Dommer, Jennifer, Fischer, Steve, Gajria, Bindu, ...

PlasmoDB (http://PlasmoDB.org) is a functional genomic database for Plasmodium spp. that provides a resource for data analysis and visualization in a gene-by-gene or genome-wide scale. PlasmoDB...

Discovering Semantic Web Services using the Tversky Model with a Case Study based upon Semantically Annotated WSDL (2008)

Jorge Cardoso, John A. Miller

To make semantic Web services accessible to users, providers use registries to publish them. Unfortunately, the current registries use discovery mechanisms which are inefficient, as they do not...

By (2008)

Rakesh Malhotra, John Miller, Rakesh Malhotra, John A. Miller

XML databases lie at the conjunction of two disparate themes and have to address issues related to both. On one hand there is the traditional database field of structured data, query languages,...

Security in Web-Based Workflow Management Systems (2008)

John A. Miller, Mei Fan, Amit P. Sheth, Krys J. Kochut

Web-based workflows are increasingly becoming a viable choice for workflows that span multiple organizations. Until recently, Web technology has not been terribly secure. However, by utilizing...

WS-BioZard: A Wizard for Composing Bioinformatics Web Services (2008)

Zhiming Wang, John A. Miller, Jessica C. Kissinger

As the amount of biological data continues to increase, how biologists share data and analysis tools efficiently is becoming an important issue. Web service technology is a promising solution because...

International Journal of Web Services Research, Vol.4, No.4, 2007 Ontology Driven Data Mediation in Web Services (2008)

Meenakshi Nagarajan, Kunal Verma, Amit P. Sheth, John A. Miller

With the rising popularity of Web services, both academia and industry have invested considerably in Web service description standards, discovery, and composition techniques. The standards based...

Security and Authorization Issues in HL7 Electronic Health Records: A Semantic Web Services Based Approach ABSTRACT: (2008)

Richard S. Patterson, Jorge Cardoso, John A. Miller, Mike Davis

As Semantic Web services begin to emerge as the next evolution of the Service Oriented Architecture, it is become clear that authorization is going to be one of its biggest challenges. Not only are...

International Journal of Web Services Research, Vol.X, No.X, 200X Providing Fault Tolerance for Transactional Web Services ABSTRACT (2008)

Ivan Vasquez, John A. Miller, Kunal Verma

Transactional business processes require a high degree of reliability in order to guarantee consistent results. In case of failure, participants must take the necessary actions to leave the process...

Impact of the Semantic Web on Modeling and Simulation (2008)

John A. Miller, Congzhou He, Julia I. Couto

1 Introduction During the middle 1990s, the World-Wide Web began to substantially impact the use of computer technology. This sparked the development of the field of Web-based Simulation, which is...

version) Framework for Semantic Web Process Composition (2008)

Kaarthik Sivashanmugam, John A. Miller, Amit P. Sheth, Kunal Verma

Web services have been recognized to have the potential to revolutionize ecommerce. The potential for businesses to be able to interact with each other on the fly is very appealing. To date, however,...

GlycoBrowser: A Tool for Contextual Visualization of Biological Data and Pathways Using Ontologies (2008)

Matthew Eavenson, Maciej Janik, Shravya Nimmagadda, John A. Miller, Krys J. Kochut, William S. York

Abstract. This paper introduces GlycoBrowser, a dynamic biological pathway exploration and visualization tool. Its capabilities include incremental navigation of pathways, as well as overlaying...

Security for the METEOR Work ow Management System Abstract (2008)

John A. Miller, Mei Fan, Shengli Wu, Ismailcem B. Arpinar, Amit P. Sheth, Krys J. Kochut

actment services, WebWork which is purely Web-based and ORBWork, which usesbothWeb and

GiardiaDB and TrichDB : integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis (2008)

Aurrecoechea, Cristina, Brestelli, John, Brunk, Brian P., Carlton, Jane M., Dommer, Jennifer, Fischer, Steve, ...

© 2008 The Authors. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License. The definitive version was published in Nucleic Acids...

An Evaluation of Multiple Approaches For Database Federation in Life Science (2008)

Zhiming Wang, Xin Gao, Congzhou He, John A. Miller, Jessica C, Mark Heiges, ...

Between technological breakthrough and new computational approaches, the amount of biological data is increasing explosively. Till to 2007, there are 968 biological databases. To provide biologists...

Ontologies for Modeling and Simulation: An Initial Framework (2008)

John A. Miller, Gregory T. Baramidze, Amit P. Sheth, A. Silver, Paul A. Fishwick

Many fields have or are developing ontologies for their subdomains. The Gene Ontology (GO) is now considered to be a great success in biology, a field that has already developed several extensive...

J3DV: A Java-Based 3D Database Visualization Tool Xiang Fang (2008)

John A. Miller, Jonathan Arnold

SUMMARY Data visualization helps users process, interpret, and act upon data in large data storage. In this paper, we present a Java-based 3D database visualization tool, J3DV. It successfully solved...

Demonstrating Dynamic Configuration and Execution of Web processes (2008)

Karthik Gomadam, Kunal Verma, Amit P. Sheth, John A. Miller

Abstract. Web processes are next generation workflows on the web, created using Web services. In this paper we demonstrate the METEOR-S Configuration and Execution Environment (MCEE 1) system. It...

R.: Spatial and Temporal Target Association through Semantic Analysis (2008)

David Luper, Delroy Cameron, John A. Miller, Hamid R. Arabnia

Abstract- We present an application for analyzing temporal and spatial interaction in an Association Network environment based on integrating Global Positioning Systems (GPS) Data, RDF Metadata and...

Abstract The JSIM Web-Based Simulation Environment (2008)

John A. Miller, Andrew F. Seila, Xuewei Xiang

In its ideal form, Web-based simulation should allow simulation models as well as simulation results to be as readily distributable and composable as today’s Web documents. The rapid advances in...

Chapter 1 Designing Semantic Web Processes: The WSDL-S Approach (2008)

Ke Li, Kunal Verma, Ranjit Mulye, Reiman Rabbani, John A. Miller, P. Sheth

Many businesses are adopting Web Service technologies to provide greater access to their applications. Due to the fast-paced E-Commerce requirements, more and more businesses prefer to only creating...

W.S.: GlycoVault: A Bioinformatics Infrastructure for Glycan Pathway Visualization, Analysis and Modeling (2008)

S. Nimmagadda, A. Basu, M. Evenson, J. Han, M. Janik, R. Narra, ...

Glycan biosynthesis is the process by which glycans are built in the cells. Information about the process is available from several Web accessible databases, published papers, experimental data...

Security in Web-Based Workflow Management Systems (2007)

John A. Miller, Mei Fan, Amit P. Sheth, Krys J. Kochut

Web-based workflows are increasingly becoming a viable choice for workflows that span multiple organizations. Until recently, Web technology has not been terribly secure. However, by utilizing...

Using Simulation to Facilitate Eective Work ow Adaptation (2007)

John A. Miller, Jorge Cardoso, Gregory Silver

In order to support realistic real-world processes, work-ow systems need to be able to adapt to changes. Detecting the need to change and deciding what changes to carry out are very dicult....

Using Simulation to Facilitate Effective Workflow Adaptation (2007)

John A. Miller, Jorge Cardoso, Gregory Silver

In order to support realistic real-world processes, workflow systems need to be able to adapt to changes. Detecting the need to change and deciding what changes to carry out are very difficult....

Automatic Composition of Semantic Web Services using Process Mediation (2007)

Zixin Wu, Ajith Ranabahu, Karthik Gomadam, Amit P. Sheth, John A. Miller

Web service composition has quickly become a key area of research in the services oriented architecture community. One of the challenges in composition is the existence of heterogeneities across...

A Comparison of Federated Databases with Web Services for the Integration of Bioinformatics Data (2007)

Zhiming Wang, Xin Gao, Congzhou He, John A. Miller, Jessica C. Kissinger, Mark Heiges, ...

Abstract- Between technological breakthroughs and new computational approaches, the amount of biological data is increasing explosively. Currently, there are many data integration approaches that can...

Configuration and Adaptation of Semantic Web Processes (2006)

Kunal Verma, Karthik Gomadam, Prashant Doshi, John A. Miller, Amit P. Sheth

In this paper, we present the METEOR-S framework for configuration and adaptation of Semantic Web processes. This paper shows how semantic descriptions of Web services can be used to facilitate Web...

APPLYING FEEDFORWARD CONTROL. (2005)

Miller,John A., Murrill,Paul W., Smith,Cecil L.

Feedforward control is an advanced control technique which has become increasingly important as the demand for better control has grown. This article will review previous work and illustrate the main...

STUDY OF INTERMETALLIC COMPOUNDS. (2005)

O'CONNELL, Thomas E., Miller, John A.

A new class of alloys based on intermetallic compounds in the titanium-aluminum system has shown the potential for application in the temperature range of 650 to 900 deg. C (1200 to 1650 deg. F)....

Individual Differences, Structure, Task, and External Environment and Leader Behavior: A Summary. (2005)

Valenzi,Enzo R., Miller,John A., Eldridge,Larry D., Irons,Priscilla W., Solomon,Robert J.

The report summarizes a literature search conducted in the areas of individual differences, task characteristics, organizational structure, and external environment as they relate to leader behavior....

The METEOR-S approach for configuring and executing dynamic web processes (2005)

Kunal Verma, Karthik Gomadam, Amit P. Sheth, John A. Miller, Zixin Wu

Web processes are the next generation workflows created using Web services. This paper addresses research issues in creating a framework for configuring and executing dynamic Web processes. The...

by (2005)

Amit P. Sheth, Major Advisor, John A. Miller, Amit P. Sheth, ...

In most contemporary approaches to pattern discovery in graphs, either quantitative anomalies or frequency of substructure is used to measure the relevance of a pattern. In this thesis, we address...

SEMANTIC WEB by (2004)

Christian Halaschek-wiener, Amit P. Sheth, Christian Halaschek-wiener, Maureen Grasso, Amit P. Sheth, ...

The focus of contemporary Web information retrieval systems has been to provide efficient support for the querying and retrieval of relevant documents. More recently, information retrieval over...

Masters Thesis: Constraint Driven Web Service Composition (2004)

Rohit Aggarwal, Maureen Grasso, John A. Miller, John A. Miller, William S. York

Creating Web processes using Web service technology gives us the opportunity for selecting new services which best suit our need at the moment. Doing this automatically would require us to quantify...

SEMANTIC WEB by (2004)

Christian Halaschek-wiener, Amit P. Sheth, Christian Halaschek-wiener, Maureen Grasso, Amit P. Sheth, ...

The focus of contemporary Web information retrieval systems has been to provide efficient support for the querying and retrieval of relevant documents. More recently, information retrieval over...

Performance Analysis and Simulation of Composite Web Services (2003)

Senthilanand Chandrasekaran, John A. Miller, Gregory S. Silver, Budak Arpinar, Amit P Sheth

The new paradigm for distributed computing over the Internet is that of Web services. They are Web accessible software components, which can be combined and linked together to create new...

Web Services: Technical Evolution yet Practical Revolution (2003)

Amit Sheth, John A. Miller

Web services are here to stay. Both business and technical considerations will provide them with the staying power and tailwind to survive the hype. Despite their lack of a major technical...

Framework for semantic web process composition (2003)

Kaarthik Sivashanmugam, John A. Miller, Amit P. Sheth, Kunal Verma

Web services have been recognized to have the potential to revolutionize ecommerce. The potential for businesses to be able to interact with each other on the fly is very appealing. To date, however,...

Monte Carlo Simulation Studies of Polymerization of Polyurethane Block Copolymer. IV. Modeling of Experimental Data, (2002)

Speckhard,Thomas A., Homan,James G., Miller,John A., Cooper,Stuart L.

Three different models which use the Monte Carlo method have been developed to predict the molecular weight, composition, and hard segment length distribution of polyurethane block copolymers...

Monte Carlo Simulation Studies of the Polymerization of Polyurethane Block Copolymers. III. Modelling of Premature Phase Separation during Reaction and Differing Reactivities of the Chain Extender and Polyol Using the Simple Sinking Pool Model, (2002)

Miller,John A., Speckhard,Thomas A., Homan,James G., Cooper,Stuart L.

Because of the complexities involved in polyurethane reaction chemistry and the difficulties encountered in making experimental measurements, relatively little attention has been paid to determining...

Designing an XML Database Engine: API and Performance (2002)

Sudhanshu Sipani, Kunal Verma, Xiao-qing Zeng, Dongsheng Che, Kai Wong, Advisor Dr, ...

XML (eXtensible Markup Language) is fast becoming the common electronic data interchange language between applications. In this paper we describe a query processing engine called ‘Db4XML’....

Transaction Management for a Main-Memory Database (2002)

Piyush Burte, Boanerges Aleman-meza, D. Brent Weatherly, Rong Wu, Supervising Professor, John A. Miller

As part of research by members of the Department of Computer Science at the University of Georgia, we have developed a Java-based Transaction Manager that fits into the multi-layered design of MMODB,...

Web Service Technologies and their Synergy with Simulation (2002)

Senthilanand Chandrasekaran, Gregory Silver, John A. Miller, Jorge Cardoso, Amit P. Sheth

The World Wide Web has had an huge influence on the computing field in general as well as simulation in particular (e.g., Web-Based Simulation). A new wave of development based upon XML has started....

Composition, performance analysis and simulation of web services (2002)

Senthilanand Chandrasekaran, John A. Miller, Gregory S. Silver, Budak Arpinar, Amit P. Sheth

Abstract The new paradigm for distributed computing over the Internet is that of Web services. They are Web accessible software components which can be combined and linked together to create new...

Research and Commercial Opportunities in Web-Based Simulation (2001)

John A. Miller, Paul A. Fishwick

In a few short years, Web-Based Simulation, has exhibited explosive growth in the simulation research community. This paper which grew out of a panel discussion at the 2000 WEBSIM Con-ference,...

Arpinar: RepoX: An XML Repository for Workflow Design and Specifications (2001)

Minrong Song, John A. Miller, Ismailcem B. Arpinar, John A. Miller

More and more workflow systems are taking XML as their basic data format for workflow process definition, data type definition, and control information definition. For XML-based workflow systems, an...

Research and Commercial Opportunities in Web-Based Simulation (2001)

John A. Miller, Paul A. Fishwick, Perakath Benjamin

In a few short years, Web-Based Simulation, has exhibited explosive growth in the simulation research community. This paper which grew out of a panel discussion at the 2000 WEBSIM Conference, brie y...

Research and Commercial Opportunities in Web-Based Simulation (2001)

John A. Miller, Paul A. Fishwick, Perakath Benjamin

In a few short years, Web-Based Simulation, has exhibited explosive growth in the simulation research community. This paper which grew out of a panel discussion at the 2000 WEBSIM Conference, brie y...

2001. Building a Web-based federation simulation system with JINI and XML (2001)

Xueqin Huang, John A. Miller

In a Web-Based federated simulation system, a group of simulation models residing on different machines attached to the Internet, called federates, collaborate with each other to accomplish a common...

Progress towards standards for XML databases (2001)

Maria Chinwala, Rakesh Malhotra, John A. Miller

XML is becoming increasingly popular as a means of exchanging a wide variety of data on the web. It is anticipated that in the future, many websites will be built from XML documents. XML databases...

Research and Commercial Opportunities in Web-Based Simulation (2001)

John A. Miller, Paul A. Fishwick, Perakath Benjamin

In a few short years, Web-Based Simulation, has exhibited explosive growth in the simulation research community. This paper which grew out of a panel discussion at the 2000 WEBSIM Con-ference,...

Algebraic Languages for XML Databases (2001)

Maria G. Chinwala, John A. Miller

XML is becoming increasingly popular as a means of exchanging a wide variety of data on the web. It is anticipated that in the future, many websites will be built from XML documents. XML databases...

Querying XML documents (2000)

John A. Miller, Sonali Sheth

Web-based simulation environments will need to maintain a large collection of documents. Information about simulation models and results from multiple sites will need to be stored. This information...

The JSIM Web-Based Simulation Environment (2000)

John A. Miller, Andrew F. Seila, Xuewei Xiang

In its ideal form, Web-based simulation should allow simulation models as well as simulation results to be as readily distributable and composable as today's Web documents. The rapid advances in...

Perspectives in Modeling: Simulation, Database and Workflow," Conceptual Modeling: Current Issues and Future (1999)

John A. Miller, Amit P. Sheth, Krys J. Kochut

Abstract. Development of today’s advanced applications is increasingly being accomplished using multi-faceted modeling. For example, the areas of simulation and workflow modeling generally need...

ORBWork: A CORBA-Based Fully Distributed, Scalable and Dynamic Workflow Enactment Service for METEOR (1999)

Krys J. Kochut, Amit P. Sheth, John A. Miller

Second generation workflow management systems need to deal with heterogeneity of platforms within and across cooperating enterprises along with legacy applications and data. At the same time, there...

A Multilevel Secure Workflow Management System (1999)

Myong H. Kang, Judith N. Froscher, Amit P. Sheth, Krys J. Kochut, John A. Miller

Abstract. The Department of Defense (DoD) needs multilevel secure (MLS) workflow management systems to enable globally distributed users and applications to cooperate across classification levels to...

Scenario Management In Web-Based Simulation (1999)

Andrew F. Seila, John A. Miller

Internet communications in general and the WorldWide Web specifically are revolutionizing the computer industry. Today, the Web is full of important documents and clever applets. Java applets and...

A Multilevel Secure Workflow Management System (1999)

Myong H. Kang, Judith N. Froscher, Amit P. Sheth, Krys J. Kochut, John A. Miller

. The Department of Defense (DoD) needs multilevel secure (MLS) workflow management systems to enable globally distributed users and applications to cooperate across classification levels to achieve...

The JSIM Web-Based Simulation Environment (1999)

John A. Miller, Andrew F. Seila, Xuewei Xiang

In its ideal form, Web-based simulation should allow simulation models as well as simulation results to be as readily distributable and composable as today's Web documents. The rapid advances in...

A Multilevel Secure Workflow Management System (1999)

Myong H. Kang, Judith N. Froscher, Amit P. Sheth, Krys J. Kochut, John A. Miller

Abstract. The Department of Defense (DoD) needs multilevel secure (MLS) workflow management systems to enable globally distributed users and applications to cooperate across classification levels to...

A Multilevel Secure Workflow Management System (1999)

Myong H. Kang, Judith N. Froscher, Amit P. Sheth, Krys J. Kochut, John A. Miller

Abstract. The Department of Defense (DoD) needs multilevel secure (MLS) workflow management systems to enable globally distributed users and applications to cooperate across classification levels to...

Fixture for Tensile and Stress Rupture Testing of Turbine Blades. (1998)

Struthers,John O., Miller,John A., Boucher,Raymond R.

The patent describes a fixture to hold turbine blades, too small for conventional test-bar testing methods, which grasps the root and tip end of the blade. The fixture is formed of a suitable metal...

USE OF SEARCH TECHNIQUES TO DETERMINE OPTIMAL SWITCHING TIMES, (1998)

Miller,John A., Smith,Cecil L., Murrill,Paul W.

An important part of most modern digital control systems is the supervisory or steady-state optimization programs. The purpose of these second level programs is to determine optimum values for the...

AN APPLICATION OF OPTIMAL CONTROL THEORY. (1998)

Miller,John A., Smith,Cecil L., Murrill,Paul W.

The purpose of this article is to show that optimal control theory can be used to develop a control strategy for a practical system, namely a distillation column. The approach will be to model the...

COMBATTING OBSOLESCENCE USING PERCEIVED DISCREPANCIES IN JOB EXPECTATIONS OF RESEARCH MANAGERS AND SCIENTISTS: A PRELIMINARY REPORT. (1998)

Barrett,Gerald V., Bass,Bernard M., Miller,John A.

R and D scientists, engineers and managers completed a questionnaire Exercise Future as part of an experiment to test effects on subsequent self-development activities. Three-fourths see and want...

Comparison of Optimal and Suboptimal Controllers. (1998)

Miller,John A., Smith,Cecil L., Murrill,Paul W.

Basically there are two approaches to the design of control systems. One approach is to propose a given form of the control algorithm or strategy, and then determine the numerical values of the...

An Experiment to Test Methods of Increasing Self-Development Activities among Research and Development Personnel. (1998)

Miller,John A., Bass,Bernard M., Mihal,William L.

Four hundred fifty subjects from two major U. S. Navy research and development laboratories participated in a field experiment designed to test methods for increasing individual self-development...

Component-Based Simulation Environments: JSIM as a Case Study Using Java Beans (1998)

John A. Miller, Yongfu Ge, Junxiu Tao

Component-based software can be used to develop highly modular simulation environments supporting high reusability of software components. This paper examines a case study in which JSIM, a Javabased...

JSIM: A Java-Based Simulation and Animation Environment (1997)

John A. Miller, Rajesh S. Nair, Zhiwei Zhang, Hongwei Zhao

In this paper, we present JSIM, a Java-based simulation and animation environment being developed at the University of Georgia. The JSIM library includes many Java classes to make developing...

Object-Oriented Simulation Languages and Environments: A Four-Level Architecture (1997)

John A. Miller, Walter D. Potter, Krys J. Kochut, Deepa Ramesh

ly, this process adds another ordered pair to the instance -o f function. instance -of : Q ® K The instance -of function maps every q i Î Q to a unique k j Î K. This instantiation process then...

Hybrid Time Warp (HYT): A Protocol for Parallel Database Transaction Management (1996)

John A. Miller, Aideen M. Dennis

The Time Warp protocol has been used very successfully for parallel and distributed simulation. This paper considers several variants of Time Warp adapted for database transaction management. More...

Java-Based Query Driven Simulation Environment (1996)

Rajesh S. Nair, John A. Miller, Zhiwei Zhang

The concept of Web-based simulation can be finally realized using Java. We have used Java to create a powerful simulation modeling library which is based on the process interaction paradigm. Java...

Simulation Modeling Within Workflow Technology (1995)

John A. Miller, Amit P. Sheth, Krys J. Kochut, Xuzhong Wang, Arun Murugan

This paper presents an approach for integrating simulation modeling and analysis capabilities within the Workflow Management System (WFMS) being developed in the Large Scale Distributed Information...

Design of a WSRC Repository with an End-User Emphasis (1994)

John A. Miller, Walter D. Potter, Krys J. Kochut, Sunderraman Krishnan, Bonnie Edwards, Wensheng Zhang, ...

This report will go into depth about these and related issues. It will focus on the needs of WSRC and, in so doing, will enable the scope of the repository to be reduced somewhat. For example, one...

An Evaluation of Local Improvement Operators for Genetic Algorithms (1993)

John A. Miller, Walter D. Potter, Ravi V. Gandham, Ravi V. G, Chito N. Lapena

Genetic algorithms have demonstrated considerable success in providing good solutions to many NP-Hard optimization problems. For such problems, exact algorithms that always find the optimal solution...

Performance of Time Warp Protocols for Transaction Management in Object-Oriented Systems (1992)

John A. Miller, Nancy D. Griffeth

It has been pointed out (e.g., by Richard Fujimoto) that protocols developed for the difficult problem of parallel and distributed simulation can also be adapted to other distributed applications....

On the Integration of Knowledge, Data, and Models (1992)

John A. Miller, Walter D. Potter, Krys J. Kochut

this paper, we highlight some of our ongoing research on integrating knowledge, data, and models. Providing crisp definitions is a difficult proposition. After all, everything in a computer boils...

The SIMODULA/OBJECTR Query Driven Simulation Support Environment (1992)

John A. Miller, Orville R. Weyrich, Walter D. Potter, Vance Kessler

ly this simulation model is just a M/M/s queue.] This bank simulation program consists of a teller resource and two process specification procedures. These procedures provide a script or template for...

Query Driven Simulation As A Tool For Genetic Engineers (1992)

John A. Miller, Jonathan Arnold, Krys J. Kochut, A. Jamie Cuticchia, Walter D. Potter

Simulations/animations of genetic structures and functions, simulations of actual or conceived experiments, and animations of algorithms such as simulated annealing, which is used to reconstruct a...

The Active KDL Object-Oriented Database System and Its Application to Simulation Support (1991)

John A. Miller, Walter D. Potter, Krys J. Kochut, Ali A. Keskin, Ender Ucar

Active KDL (Knowledge/Data Language) is an object-oriented database system. It evolved from earlier work on KDL which has been ongoing since 1986 [Pott86]. The foundations of Active KDL are...

Query Driven Simulation Using Active KDL: A Functional Object-Oriented Database System (1991)

John A. Miller, Krys J. Kochut, Walter D. Potter, Ender Ucar, Ali A. Keskin

Because of the difficulty of simulating large complex systems with traditional tools, new approaches have and are being developed. One group of interrelated approaches attempts to simultaneously make...

Performance Modeling of Database and Simulation Protocols: Design Choices for Query Driven Simulation (1991)

John A. Miller, Nancy D. Griffeth

Query driven simulation is an approach to simulation modeling and analysis that attempts to automate the storage and retrieval of simulation data and simulation models. Object-oriented database...

Model Instantiation for Query Driven Simulation in Active KDL (1990)

John A. Miller, Walter D. Potter, Krys J. Kochut, Orville R. Weyrich

The focus of this paper is on how Active KDL can be used to provide a very powerful simulation support environment. Active KDL (Knowledge/Data Language) is an object-oriented database programming...

THE TOXOGLOSSAN PROBOSCIS: STRUCTURE AND FUNCTION (1989)

MILLER, JOHN A.

The structure of the proboscis and anterior alimentary system is described and reviewed in the three families (Conidae, Terebridae, Turridae) of the Conoidea (=Toxoglossa). A number of...

THE MORPHOLOGY OF THE OSPHRADIUM IN RELATION TO FEEDING HABITS IN MESO- AND NEOGASTROPODS (1989)

TAYLOR, JOHN D., MILLER, JOHN A.

The morphology of the osphradium in nine species of meso- and neogastropods was examined using scanning electron microscopy. Herbivores and detritivores (Littorina, Aporrhais) have simple osphradia...

A Software Engineering Oriented Comparison of Simulation Languages (1988)

John A. Miller, Orville R. Weyrich, David Suen

This paper examines the process-oriented features of simulation languages. In particular it compares powerful general purpose simulation languages with a simple extension to a conventional...

Adolescent sex-role identification, definition and object of information attainment / (1980)

Miller, John A.

Thesis (Ph. D.)--California School of Professional Psychology, San Diego, 1980.

The Role of the Subepidermal Nervous System in the Locomotion of the Earthworm (1949)

Miller, John A., Ting, Han-Po

Author Institution: Department of Zoology and Entomology, The Ohio State University

Galvanotropic Responses of Paramecia to Balanced Square Waves (1947)

Miller, John A., Goldston, Leo S.

Author Institution: Department of Zoology and Entomology, The Ohio State University

Production of Balanced Square Waves for Electronic Stimulation (1947)

Goldston, Leo S., Miller, John A.

Author Institution: Department of Zoology and Entomology, The Ohio State University

Studies in the Biology of the Leech IX : The Gross Nervous System (1945)

Miller, John A.

Author Institution: Department of Zoology and Entomology, The Ohio State University, Columbus, Ohio

Studies in the Biology of the Leech. VIII, Modifications in Neurological Microtechnique (1944)

Miller, John A.

Author Institution: Department of Zoology and Entomology, Ohio State University

Studies in the Biology of the Leech. VII, A New Method of Staining Nervous Tissue (1944)

Miller, John A.

Author Institution: Department of Zoology and Entomology, The Ohio State University, Columbus, Ohio

Studies in the Biology of the Leech. VI, The Anatomical Basis for Certain Leech Behavior (1943)

Miller, John A.

Author Institution: Department of Zoology and Entomology, The Ohio State University, Columbus, Ohio

Drawing, Factory (1941)

Miller, John A.

Pencil/white paper; 12" x 7"

Temple Of Religion (1941)

Miller, John A.

Pencil, watercolor/white paper; 63" x 40"

A Boys' Camp (1941)

Miller, John A.

Watercolor/white paper; 40" x 31"

A Tropical Bird House In A Zoo (1941)

Miller, John A.

Watercolor/white paper; 30" x 21"

Mapping by sequencing the Pneumocystis genome using the ordering DNA sequences V3 tool.

Xu, Zheng, Lance, Britton, Vargas, Claudia, Arpinar, Budak, Bhandarkar, Suchendra, Kraemer, Eileen, ...

A bioinformatics tool called ODS3 has been created for mapping by sequencing. The tool allows the creation of integrated genomic maps from genetic, physical mapping, and sequencing data and permits...

Mapping by sequencing the Pneumocystis genome using the ordering DNA sequences V3 tool.

Xu, Zheng, Lance, Britton, Vargas, Claudia, Arpinar, Budak, Bhandarkar, Suchendra, Kraemer, Eileen, ...

A bioinformatics tool called ODS3 has been created for mapping by sequencing. The tool allows the creation of integrated genomic maps from genetic, physical mapping, and sequencing data and permits...

GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis

Aurrecoechea, Cristina, Brestelli, John, Brunk, Brian P., Carlton, Jane M., Dommer, Jennifer, Fischer, Steve, ...

GiardiaDB (http://GiardiaDB.org) and TrichDB (http://TrichDB.org) house the genome databases for Giardia lamblia and Trichomonas vaginalis, respectively, and represent the latest additions to the...

PlasmoDB: a functional genomic database for malaria parasites

Aurrecoechea, Cristina, Brestelli, John, Brunk, Brian P., Dommer, Jennifer, Fischer, Steve, Gajria, Bindu, ...

PlasmoDB (http://PlasmoDB.org) is a functional genomic database for Plasmodium spp. that provides a resource for data analysis and visualization in a gene-by-gene or genome-wide scale. PlasmoDB...