Expected Performance of the ATLAS Experiment - Detector, Trigger and Physics (2008)
Abat, E., Abbott, B., Abdallah, J., Abdelalim, A. A., Abdesselam, A., ...
A detailed study is presented of the expected performance of the ATLAS detector. The reconstruction of tracks, leptons, photons, missing energy and jets is investigated, together with the performance...
Toshito, T., Kodama, K., Sihver, L., Yusa, K., Ozaki, M., Amako, K., ...
We have studied charged nuclear fragments produced by 200 - 400 MeV/nucleon carbon ions, interacting with water and polycarbonate, using a newly developed emulsion detector. Total and partial...
Geant4 and its validation (2006)
Amako, K., Guatelli, S., Ivanchencko, V., Maire, M., Mascialino, B., Murakami, K., ...
Geant4 is an object-oriented toolkit for simulating the passage of particles through matter. At the very heart of Geant4 there is a wide set of complementary, and sometimes alternative, physics...
Geant4 and its validation (2006)
Amako, K., Guatelli, S., Ivanchencko, V., Maire, M., Mascialino, B., Murakami, K., ...
Geant4 is an object-oriented toolkit for simulating the passage of particles through matter. At the very heart of Geant4 there is a wide set of complementary, and sometimes alternative, physics...
Geant4 Developments and Applications (2006)
Allison, J., Amako, K., Apostolakis, J., Araujo, H., Dubois, P.A., Asai, M., ...
Geant4 is a software toolkit for the simulation of the passage of particles through matter. It is used by a large number of experiments and projects in a variety of application domains, including...
Comparison of Geant4 electromagnetic physics models against the NIST reference data (2005)
Amako, K., Guatelli, S., Ivanchenko, V.N., Maire, M., Mascialino, B., Murakami, K., ...
The Geant4 Simulation Toolkit provides an ample set of physics models describing electromagnetic interactions of particles with matter. This paper presents the results of a series of comparisons for...
Comparison of Geant4 electromagnetic physics models against the NIST reference data (2005)
Amako, K., Guatelli, S., Ivanchenko, V.N., Maire, M., Mascialino, B., Murakami, K., ...
The Geant4 Simulation Toolkit provides an ample set of physics models describing electromagnetic interactions of particles with matter. This paper presents the results of a series of comparisons for...
Interfacing the JQMD and JAM Nuclear Reaction Codes to Geant4 (2003)
Koi, T., Asai, M., Wright, D. H., Niita, K., Nara, Y., Amako, K., ...
Geant4 is a toolkit for the simulation of the passage of particles through matter. It provides a comprehensive set of tools for geometry, tracking, detector response, run, event and track management,...
Development of an Interface for Using EGS4 Physics Processes in Geant4 (2003)
Murakami, K., Amako, K., Hirayama, H., Namito, Y., Sasaki, T., Asai, M., ...
As simulation system, the variety of physics processes implemented is one of the most important functionalities. In that sense, Geant4 is one of the most powerful simulation toolkits. Its flexibility...
GEANT4: A Simulation toolkit (2003)
Agostinelli, S, Allison, J, Amako, K, Apostolakis, John, Araújo, H M, Arce, P, ...
Geant4 is a toolkit for simulating the passage of particles through matter. It includes a complete range of functionality including tracking, geometry, physics models and hits. The physics processes...
Geant4 - A simulation toolkit (2003)
Agostinelli, S., Allison, J., Amako, K., Apostolakis, J., Araujo, H., Arce, P., ...
Geant4 - A simulation toolkit (2003)
Agostinelli, S., Allison, J., Amako, K., Apostolakis, J., Araujo, H., Arce, P., ...
Geant4 - A simulation toolkit (2003)
Agostinelli, S., Allison, J., Amako, K., Apostolakis, J., Araujo, H., Arce, P., ...
Geant4 - A simulation toolkit (2003)
Agostinelli, S., Allison, J., Amako, K., Apostolakis, J., Araujo, H., Arce, P., ...
Geant4 - A simulation toolkit (2003)
Agostinelli, S., Allison, J., Amako, K., Apostolakis, J., Araujo, H., Arce, P., ...
Distributed applications monitoring at system and network level (2001)
MONARC Collaboration, Ghiselli, A, Aderholz, M, Amako, K, Auge, E, Bagliesi, G, ...
Models of networked analysis at regional centres for LHC experiments (MONARC). Phase 2 report (2000)
Aderholz, M, Amako, K, Auge, E, Bagliesi, G, Barone, L, Battistoni, G, ...
Precise measurement of the $e^{+} e^{-}\to \mu^{+} \mu^{-}$ reaction at $\sqrt{s} = 57.77 GeV (1998)
Miura, M, Odaka, S, Arima, T, Tobimatsu, K, Ogawa, K, Shirai, J, ...
Measurement of the proton-antiproton pair production from two-photon collisions at TRISTAN (1998)
Hamasaki, H, Abe, K, Amako, K, Arai, Y, Asano, Y, Chiba, M, ...
$D^{*+-}$ inclusive production in two-photon process at $\sqrt{s}$ = 58 GeV in TRISTAN (1997)
Ohyama, H, Abe, K, Amako, K, Arai, Y, Asano, Y, Chiba, M, ...
Precise measurement of Bhabha scattering at a center-of-mass energy of 57.77 GeV (1996)
Arima, T, Odaka, S, Ogawa, K, Shirai, J, Tsuboyama, T, Hosoda, N, ...
ATLAS calorimeter performance (1996)
ATLAS Collaboration, Airapetian, A, Grabsky, V, Hakopian, H, Vartapetian, A, Fares, F, ...
ATLAS computing technical proposal (1996)
ATLAS Collaboration, Airapetian, A, Grabsky, V, Hakopian, H, Vartapetian, A, Fares, F, ...
ATLAS computing technical proposal (1996)
Airapetian, A., Grabsky, V., Hakopian, H., Vartapetian, A., Fares, F., Moorhead, G.F., ...
ATLAS calorimeter performance (1996)
Airapetian, A., Grabsky, V., Hakopian, H., Vartapetian, A., Fares, F., Moorhead, G.F., ...
ATLAS computing technical proposal (1996)
Airapetian, A., Grabsky, V., Hakopian, H., Vartapetian, A., Fares, F., Moorhead, G.F., ...
ATLAS calorimeter performance (1996)
Airapetian, A., Grabsky, V., Hakopian, H., Vartapetian, A., Fares, F., Moorhead, G.F., ...
Study of $\pi^{+}\pi^{-}$ pair production in a two-photon process at TRISTAN (1995)
Yabuki, F, Abe, K, Amako, K, Arai, Y, Arima, T, Asano, Y, ...
Object-oriented analysis and design of a GEANT based detector simulator (1994)
Amako, K, Kanzaki, J I, Sasaki, T, Takaiwa, Y, Nakagawa, Y, Yamagata, T
Object oriented approach to software development for LHC experiments (1994)
Bos, K, O'Neale, S, Bruyant, F, Dodgson, M, Innocente, V, Jank, W, ...
Astromicin-induced membrane damage in Serratia marcescens.
The morphological changes in Serratia marcescens induced by astromicin were determined by a new technique of electron microscopy, a rapid freezing and substitution fixation technique, and a...
Extraction from prawn shells of substances cryoprotective for Vibrio cholerae.
Shimodori, S, Moriya, T, Kohashi, O, Faming, D, Amako, K
Substances cryoprotective for Vibrio cholerae were detected from prawn shells immersed in phosphate-buffered saline. This cryoprotective activity was heat resistant and sensitive to treatment with...
Effects of chitin and its soluble derivatives on survival of Vibrio cholerae O1 at low temperature.
Amako, K, Shimodori, S, Imoto, T, Miake, S, Umeda, A
Chitin concentrations greater than 0.04% (wt/wt) protected cholera vibrios against killing at low temperature. This protective effect was detected with both the soluble form of chitin, glycol chitin,...
Mizunoe, Y, Matsumoto, T, Amako, K, Sekiguchi, M, Kumazawa, J
Three open reading frames, designated smfE, smfF, and smfG, within the mannose-resistant fimbria gene cluster of Serratia marcescens were identified. smfG, which is responsible for determining the...
Arizono, T, Umeda, A, Amako, K
The fine structure of the capsule of Staphylococcus aureus Smith diffuse was examined by the technique of freeze-substitution and immunoelectron microscopy. The cell surface was covered with a thick...
A cryptic fimbrial gene in Serratia marcescens.
Moriya, T, Kawabata, S, Mizunoe, Y, Amako, K
The gene coding for the mannose-sensitive hemagglutinating fimbriae in Serratia marcescens US5 was cloned into Escherichia coli K4 with a cosmid vector system. One of the transformants, US5-1,...
Mizunoe, Y, Nakabeppu, Y, Sekiguchi, M, Kawabata, S, Moriya, T, Amako, K
Serratia marcescens US46, a human urinary tract isolate, exhibits mannose-resistant hemagglutination and agglutinates yeast cells, thereby indicating that it has two types of adhesins. We constructed...
Fine structures of the capsules of Klebsiella pneumoniae and Escherichia coli K1.
The fine structures of the capsules of Klebsiella pneumoniae and Escherichia coli were determined by the rapid-freezing technique. The capsular layer was seen as a densely packed accumulation of fine...
Structure of the Staphylococcus aureus cell wall determined by the freeze-substitution method.
The fine structure of the Staphylococcus aureus cell wall was determined by electron microscopy with the new technique of rapid freezing and substitution fixation. The surface of the cell wall was...
Arrangement of peptidoglycan in the cell wall of Staphylococcus spp.
The arrangement of peptidoglycan in the cell wall of Staphylococcus was observed with the newly developed freeze-fracture technique, using n-octanol instead of water as the freezing medium. The...
Analysis of strains of Campylobacter fetus by pulsed-field gel electrophoresis.
Fujita, M, Fujimoto, S, Morooka, T, Amako, K
Campylobacter fetus chromosomal DNA from 21 strains was analyzed by pulsed-field gel electrophoresis. The fingerprint patterns generated with SmaI and SalI were distinctive. Using the profiles...
Takata, T, Fujimoto, S, Amako, K
Three nonchemotactic mutants (D54, Y14, and N74) of Campylobacter jejuni were isolated from wild-type strain FUM158432 by either the negative swarming or liquid gradient method with brucella broth as...
Fujimoto, S, Takade, A, Amako, K, Blaser, M J
The correlation between the molecular size of the surface layer protein (S protein) and both structure and antigenicity of the Campylobacter fetus surface layer (S layer) was investigated in several...
The role of the capsule in the reaction with anti-O or anti-K serum was examined morphologically by the techniques of freeze-substitution and immunoelectron microscopy in two strains of Klebsiella...
Antigenic analysis of Serratia marcescens fimbriae with monoclonal antibodies.
Jingushi, S, Mitsuyama, M, Moriya, T, Amako, K
Monoclonal antibodies (MAbs) were raised against the purified fimbriae of Serratia marcescens US46, a strain expressing three morphologically distinct fimbriae. The widths of these fimbriae were 7,...
Purification and characterization of Serratia marcescens US5 pili.
Kohno, K, Yamamoto, T, Kuroiwa, A, Amako, K
The pili of Serratia marcescens US5 isolated from a patient with urinary tract infection were purified and characterized. During the aeration culture, the pili were detached from the bacteria and...
Ontogeny of macrophage function to release superoxide anion in conventional and germfree mice.
Mitsuyama, M, Ohara, R, Amako, K, Nomoto, K, Yokokura, T, Nomoto, K
To determine whether the presence of bacterial flora contributes to the ontogenic development of macrophage function, the ability of macrophages to release superoxide anion (O2-) in response to...
Umeda, A, Ikebuchi, T, Amako, K
The surface of several laboratory strains of Staphylococcus aureus were observed with a scanning electron microscope, and the presence of two morphologically characteristic structures--a ridge...
Hexagonal surface layer of Campylobacter fetus isolated from humans.
Fujimoto, S, Umeda, A, Takade, A, Murata, K, Amako, K
Electron microscopic studies of the surface structure of Campylobacter fetus by the freeze-etching method showed two different types of S layer. One was in a hexagonal array, and the other was in a...
Physicochemical and Biological Properties of Fibrous Pseudomonas Bacteriophages
Minamishima, Y., Takeya, K., Ohnishi, Y., Amako, K.
Two fibrous Pseudomonas phages, Pf1 and Pf2, have been isolated and characterized. The phages were serologically related and were indistinguishable morphologically when viewed by electron microscopy....
Astromicin-induced membrane damage in Serratia marcescens.
The morphological changes in Serratia marcescens induced by astromicin were determined by a new technique of electron microscopy, a rapid freezing and substitution fixation technique, and a...
Extraction from prawn shells of substances cryoprotective for Vibrio cholerae.
Shimodori, S, Moriya, T, Kohashi, O, Faming, D, Amako, K
Substances cryoprotective for Vibrio cholerae were detected from prawn shells immersed in phosphate-buffered saline. This cryoprotective activity was heat resistant and sensitive to treatment with...
Effects of chitin and its soluble derivatives on survival of Vibrio cholerae O1 at low temperature.
Amako, K, Shimodori, S, Imoto, T, Miake, S, Umeda, A
Chitin concentrations greater than 0.04% (wt/wt) protected cholera vibrios against killing at low temperature. This protective effect was detected with both the soluble form of chitin, glycol chitin,...
Mizunoe, Y, Matsumoto, T, Amako, K, Sekiguchi, M, Kumazawa, J
Three open reading frames, designated smfE, smfF, and smfG, within the mannose-resistant fimbria gene cluster of Serratia marcescens were identified. smfG, which is responsible for determining the...
Arizono, T, Umeda, A, Amako, K
The fine structure of the capsule of Staphylococcus aureus Smith diffuse was examined by the technique of freeze-substitution and immunoelectron microscopy. The cell surface was covered with a thick...
A cryptic fimbrial gene in Serratia marcescens.
Moriya, T, Kawabata, S, Mizunoe, Y, Amako, K
The gene coding for the mannose-sensitive hemagglutinating fimbriae in Serratia marcescens US5 was cloned into Escherichia coli K4 with a cosmid vector system. One of the transformants, US5-1,...
Mizunoe, Y, Nakabeppu, Y, Sekiguchi, M, Kawabata, S, Moriya, T, Amako, K
Serratia marcescens US46, a human urinary tract isolate, exhibits mannose-resistant hemagglutination and agglutinates yeast cells, thereby indicating that it has two types of adhesins. We constructed...
Fine structures of the capsules of Klebsiella pneumoniae and Escherichia coli K1.
The fine structures of the capsules of Klebsiella pneumoniae and Escherichia coli were determined by the rapid-freezing technique. The capsular layer was seen as a densely packed accumulation of fine...
Structure of the Staphylococcus aureus cell wall determined by the freeze-substitution method.
The fine structure of the Staphylococcus aureus cell wall was determined by electron microscopy with the new technique of rapid freezing and substitution fixation. The surface of the cell wall was...
Arrangement of peptidoglycan in the cell wall of Staphylococcus spp.
The arrangement of peptidoglycan in the cell wall of Staphylococcus was observed with the newly developed freeze-fracture technique, using n-octanol instead of water as the freezing medium. The...
Analysis of strains of Campylobacter fetus by pulsed-field gel electrophoresis.
Fujita, M, Fujimoto, S, Morooka, T, Amako, K
Campylobacter fetus chromosomal DNA from 21 strains was analyzed by pulsed-field gel electrophoresis. The fingerprint patterns generated with SmaI and SalI were distinctive. Using the profiles...
Takata, T, Fujimoto, S, Amako, K
Three nonchemotactic mutants (D54, Y14, and N74) of Campylobacter jejuni were isolated from wild-type strain FUM158432 by either the negative swarming or liquid gradient method with brucella broth as...
Fujimoto, S, Takade, A, Amako, K, Blaser, M J
The correlation between the molecular size of the surface layer protein (S protein) and both structure and antigenicity of the Campylobacter fetus surface layer (S layer) was investigated in several...
The role of the capsule in the reaction with anti-O or anti-K serum was examined morphologically by the techniques of freeze-substitution and immunoelectron microscopy in two strains of Klebsiella...
Antigenic analysis of Serratia marcescens fimbriae with monoclonal antibodies.
Jingushi, S, Mitsuyama, M, Moriya, T, Amako, K
Monoclonal antibodies (MAbs) were raised against the purified fimbriae of Serratia marcescens US46, a strain expressing three morphologically distinct fimbriae. The widths of these fimbriae were 7,...
Purification and characterization of Serratia marcescens US5 pili.
Kohno, K, Yamamoto, T, Kuroiwa, A, Amako, K
The pili of Serratia marcescens US5 isolated from a patient with urinary tract infection were purified and characterized. During the aeration culture, the pili were detached from the bacteria and...
Ontogeny of macrophage function to release superoxide anion in conventional and germfree mice.
Mitsuyama, M, Ohara, R, Amako, K, Nomoto, K, Yokokura, T, Nomoto, K
To determine whether the presence of bacterial flora contributes to the ontogenic development of macrophage function, the ability of macrophages to release superoxide anion (O2-) in response to...
Umeda, A, Ikebuchi, T, Amako, K
The surface of several laboratory strains of Staphylococcus aureus were observed with a scanning electron microscope, and the presence of two morphologically characteristic structures--a ridge...
Hexagonal surface layer of Campylobacter fetus isolated from humans.
Fujimoto, S, Umeda, A, Takade, A, Murata, K, Amako, K
Electron microscopic studies of the surface structure of Campylobacter fetus by the freeze-etching method showed two different types of S layer. One was in a hexagonal array, and the other was in a...
Physicochemical and Biological Properties of Fibrous Pseudomonas Bacteriophages
Minamishima, Y., Takeya, K., Ohnishi, Y., Amako, K.
Two fibrous Pseudomonas phages, Pf1 and Pf2, have been isolated and characterized. The phages were serologically related and were indistinguishable morphologically when viewed by electron microscopy....