Integrated approaches to uncovering transcription regulatory networks in mammalian cells (2008)
Ravasi, Timothy, Tegner, Jesper, Tan, Kai
Integrative systems biology has emerged as an exciting research approach in molecular biology and functional genomics that involves the integration of genomics, proteomics, and metabolomics datasets....
Comparative spectroscopic and reactivity studies of Sc3-xYxN@C-80 (x=0-3) (2007)
Chen, Ning, Fan, Lou-Zhen, Tan, Kai, Wu, Yue-Qin, Shu, Chun-Ying, Lu, Xin, ...
A series of endohedral fullerenes Sc3-xYxN@C-80 (x = 0-3) with variable encaged moieties and the same C-80 cage were synthesized, isolated, and spectroscopically characterized by the laser desorption...
Kai Tan, Lee Ann Mccue, Gary D. Stormo, Email Alerting, Kai Tan, Lee Ann Mccue, ...
Making connections between novel transcription factors and their DNA motifs
Making connections between novel transcription factors and their DNA motifs (2005)
Tan, Kai, McCue, Lee Ann, Stormo, Gary D.
The key components of a transcriptional regulatory network are the connections between trans-acting transcription factors and cis-acting DNA-binding sites. In spite of several decades of intense...
Making connections between novel transcription factors and their DNA motifs (2005)
Tan, Kai, McCue, Lee Ann, Stormo, Gary D.
The key components of a transcriptional regulatory network are the connections between trans-acting transcription factors and cis-acting DNA-binding sites. In spite of several decades of intense...
Computational methods to expand the transcriptional regulatory network in Escherichia coli / (2004)
Thesis (Ph. D.)--Washington University, 2004. Program in Biochemistry.
Pattern-based parallel programming in a distributed memory environment / (2003)
"A thesis submitted to the Faculty of Graduate Studies and Research in partial fulfillment of the requirements for the degree of Master of Science, Department of Computing Science."
Pattern-based Parallel Programming in a Distributed Memory Environment (2003)
Kai Tan, Edmonton Ab, Kai Tan, Duane Szafron, Jonathan Schaeffer, Robert Hayes, ...
copies of this thesis and to lend or sell such copies for private, scholarly or scientific research purposes only. The author reserves all other publication and other rights in association with the...
Why Not Use a Pattern-based Parallel Programming System? (2003)
John Anvik, Jonathan Schaeffer, Duane Szafron, Kai Tan
Parallel programming is seen as an effective technique to improve the performance of computationally-intensive programs. This is done at the cost of increasing the complexity of the program, since...
Why Not Use a Pattern-based Parallel Programming System? (2003)
John Anvik, Jonathan Schaeffer, Duane Szafron, Kai Tan
Parallel programming environments provide a way for users to reap the benefits of parallelism, while reducing the effort required to create parallel applications. The CO2P3S parallel programming...
Kai Tan, Duane Szafron, Jonathan Schaeffer, John Anvik, Steve Macdonald
A design pattern is a mechanism for encapsulating the knowledge of experienced designers into a re-usable artifact. Parallel design patterns reflect commonly occurring parallel communication and...
Why Not Use a Pattern-based Parallel Programming System? (2003)
John Anvik, Jonathan Schaeffer, Duane Szafron, Kai Tan
Parallel programming environments provide a way for users to reap the benefits of parallelism, while reducing the effort required to create parallel applications. The CO2P3S parallel programming...
Why not use a pattern-based parallel programming system (2003)
John Anvik, Jonathan Schaeffer, Duane Szafron, Kai Tan
Abstract. Parallel programming is seen as an effective technique to improve the performance of computationally-intensive programs. This is done at the cost of increasing the complexity of the...
Liu, Jiajian, Tan, Kai, Stormo, Gary D.
Spo0A‐phosphate is essential for the initiation of cellular differentiation and developmental processes in Gram‐positive spore‐forming bacteria. Here we combined comparative genomics...
Asserting the utility of CO2P3S using the Cowichan problems (2002)
John Anvik, Jonathan Schaeffer, Duane Szafron, Kai Tan
Parallel programming environments provide a way for programmers to reap the benefits of parallelism, while reducing the effort required to create parallel applications. The CO2P3S parallel...
Generating parallel programs from the wavefront design pattern (2002)
John Anvik, Steve Macdonald, Duane Szafron, Jonathan Schaeffer, Steven Bromling, Kai Tan
Object-oriented programming, design patterns, and frameworks are common techniques that have been used to reduce the complexity of sequential programming. We have applied these techniques to the more...
A Comparative Genomics Approach to Prediction of New Members of Regulons (2001)
Tan, Kai, Moreno-Hagelsieb, Gabriel, Collado-Vides, Julio, Stormo, Gary D.
Liu, Jiajian, Tan, Kai, Stormo, Gary D.
Spo0A-phosphate is essential for the initiation of cellular differentiation and developmental processes in Gram-positive spore-forming bacteria. Here we combined comparative genomics with analyses of...
A Comparative Genomics Approach to Prediction of New Members of Regulons
Tan, Kai, Moreno-Hagelsieb, Gabriel, Collado-Vides, Julio, Stormo, Gary D.
Identifying the complete transcriptional regulatory network for an organism is a major challenge. For each regulatory protein, we want to know all the genes it regulates, that is, its regulon....
Making connections between novel transcription factors and their DNA motifs
Tan, Kai, McCue, Lee Ann, Stormo, Gary D.
The key components of a transcriptional regulatory network are the connections between trans-acting transcription factors and cis-acting DNA-binding sites. In spite of several decades of intense...
Liu, Jiajian, Tan, Kai, Stormo, Gary D.
Spo0A-phosphate is essential for the initiation of cellular differentiation and developmental processes in Gram-positive spore-forming bacteria. Here we combined comparative genomics with analyses of...
A Comparative Genomics Approach to Prediction of New Members of Regulons
Tan, Kai, Moreno-Hagelsieb, Gabriel, Collado-Vides, Julio, Stormo, Gary D.
Identifying the complete transcriptional regulatory network for an organism is a major challenge. For each regulatory protein, we want to know all the genes it regulates, that is, its regulon....
Making connections between novel transcription factors and their DNA motifs
Tan, Kai, McCue, Lee Ann, Stormo, Gary D.
The key components of a transcriptional regulatory network are the connections between trans-acting transcription factors and cis-acting DNA-binding sites. In spite of several decades of intense...
Transcriptional regulation of protein complexes within and across species
Tan, Kai, Shlomi, Tomer, Feizi, Hoda, Ideker, Trey, Sharan, Roded
Yeast two-hybrid and coimmunoprecipitation experiments have defined large-scale protein–protein interaction networks for many model species. Separately, systematic chromatin immunoprecipitation...
Tan, Kai, Feizi, Hoda, Luo, Colin, Fan, Stephanie H., Ravasi, Timothy, Ideker, Trey G.
Duplication of genes encoding transcription factors plays an essential role in driving phenotypic variation. Because regulation can occur at multiple levels, it is often difficult to discern how each...