Queiroz, Rafael, Benz, Corinna, Fellenberg, Kurt, Hoheisel, Jörg D, Clayton, Christine
Abstract Background Trypanosome gene expression is regulated almost exclusively at the post-transcriptional level, with mRNA degradation playing a decisive role. When trypanosomes are transferred...
Transcriptional Profiling Using DNA Array Data (2007)
Deutsches Krebsforschungszentrum, Nicole Hauser, Kurt Fellenberg, Tim Beißbarth
Subsequent to sequencing projects new strategies are required for efficient functional characterization of the identified genes. DNA array technology was proven to be a powerful tool by monitoring...
Systematic interpretation of microarray data using experiment annotations (2006)
Fellenberg, Kurt, Busold, Christian H, Witt, Olaf, Bauer, Andrea, Beckmann, Boris, Hauser, Nicole C, ...
Abstract Background Up to now, microarray data are mostly assessed in context with only one or few parameters characterizing the experimental conditions under study. More explicit experiment...
Use of Complex DNA and Antibody Microarrays as Tools in Functional Analyses (2006)
Andrea Bauer, Boris Beckmann, Christian Busold, Ole Brandt, Wlad Kusnezow, Janne Pullat, ...
While the deciphering of basic sequence information on a genomic scale is yielding complete genomic sequences in ever-shorter intervals, experimental procedures for elucidating the cellular effects...
Whole Genome Analysis of a Wine Yeast Strain (2006)
Nicole C. Hauser, Kurt Fellenberg, Rosario Gil, Sonja Bastuck, Jörg D. Hoheisel
Saccharomyces cerevisiae strains frequently exhibit rather specific phenotypic features needed for adaptation to a special environment. Wine yeast strains are able to ferment musts, for example,...
Christian H. Busold, Stefan Winter, Nicole Hauser, Andrea Bauer, Jörg D. Hoheisel, Kurt Fellenberg
Motivation: The functional interpretation of microarray datasets still rep-resents a time consuming and challenging task. Up to now functional cate-gories being relevant for one or more experimental...
Busold, Christian H., Winter, Stefan, Hauser, Nicole, Bauer, Andrea, Dippon, Jürgen, Hoheisel, Jörg D., ...
Motivation: The functional interpretation of microarray datasets still represents a time-consuming and challenging task. Up to now functional categories that are relevant for one or more experimental...
Busold, Christian H., Winter, Stefan, Hauser, Nicole, Bauer, Andrea, Dippon, Jürgen, Hoheisel, Jörg D., ...
Motivation: The functional interpretation of microarray datasets still represents a time consuming and challenging task. Up to now functional categories being relevant for one or more experimental...
Use of Complex DNA and Antibody Microarrays as Tools in Functional Analyses (2003)
Andrea Bauer, Boris Beckmann, Christian Busold, Ole Brandt, Wlad Kusnezow, Janne Pullat, ...
While the deciphering of basic sequence information on a genomic scale is yielding complete genomic sequences in ever-shorter intervals, experimental procedures for elucidating the cellular effects...
Scheideler,Marcel, Schlaich,Nikolaus L., Fellenberg,Kurt, Beissbarth,Tim, Hauser,Nicole C., Vingron,Martin, ...
Plants respond to pathogen attack by deploying several defense reactions. Some rely on the activation of preformed components, whereas others depend on changes in transcriptional activity. Using cDNA...
Fellenberg,Kurt, Hauser,Nicole C., Brors,Benedikt, Hoheisel,Jörg D., Vingron,Martin
Motivation: Microarray technology provides access to expression levels of thousands of genes at once, producing large amounts of data. These datasets are valuable only if they are annotated by...
Storage and analysis of microarray data (2002)
DNS-Chips ("Microarrays") ermöglichen global ausgelegte transkriptionelle Studien durch gleichzeitige Erfassung mehrerer zehntausend Gene. Hierdurch werden große Datenmengen produziert....
Microarray Data Representation, Annotation and Storage (2002)
Brazma,Alvis, Sarkans,Ugis, Robinson,Allan, Jaak,Vilo, Vingron,Martin, Hoheisel,Jörg, ...
Management and analysis of the huge amounts of data produced by microarray experiments is becoming one of the major bottlenecks in the utilization of this high-throughput technology. We describe the...
Microarray Data Representation, Annotation and Storage (2002)
Brazma, Alvis, Sarkans, Ugis, Robinson, Allan, Jaak, Vilo, Vingron, Martin, Hoheisel, Jörg, ...
Management and analysis of the huge amounts of data produced by microarray experiments is becoming one of the major bottlenecks in the utilization of this high-throughput technology. We describe the...
Fellenberg, Kurt, Hauser, Nicole C., Brors, Benedikt, Hoheisel, Jörg D., Vingron, Martin
Motivation: Microarray technology provides access to expression levels of thousands of genes at once, producing large amounts of data. These datasets are valuable only if they are annotated by...
Scheideler, Marcel, Schlaich, Nikolaus L., Fellenberg, Kurt, Beissbarth, Tim, Hauser, Nicole C., Vingron, Martin, ...
Plants respond to pathogen attack by deploying several defense reactions. Some rely on the activation of preformed components, whereas others depend on changes in transcriptional activity. Using cDNA...
Storage and analysis of microarray data [Elektronische Ressource] / (2002)
Köln, University, Diss., 2002.
Whole Genome Analysis of a Wine Yeast Strain (2001)
Nicole C. Hauser, Kurt Fellenberg, Rosario Gil, Sonja Bastuck, Jörg D. Hoheisel
Saccharomyces cerevisiae strains frequently exhibit rather specific phenotypic features needed for adaptation to a special environment. Wine yeast strains are able to ferment musts, for example,...
Correspondence analysis applied to microarray data
Fellenberg, Kurt, Hauser, Nicole C., Brors, Benedikt, Neutzner, Albert, Hoheisel, Jörg D., Vingron, Martin
Correspondence analysis is an explorative computational method for the study of associations between variables. Much like principal component analysis, it displays a low-dimensional projection of the...
Bey, Melanie, Stüber, Kurt, Fellenberg, Kurt, Schwarz-Sommer, Zsuzsanna, Sommer, Hans, Saedler, Heinz, ...
The class B MADS box transcription factors DEFICIENS (DEF) and GLOBOSA (GLO) of Antirrhinum majus together control the organogenesis of petals and stamens. Toward an understanding of how the...
Correspondence analysis applied to microarray data
Fellenberg, Kurt, Hauser, Nicole C., Brors, Benedikt, Neutzner, Albert, Hoheisel, Jörg D., Vingron, Martin
Correspondence analysis is an explorative computational method for the study of associations between variables. Much like principal component analysis, it displays a low-dimensional projection of the...
Bey, Melanie, Stüber, Kurt, Fellenberg, Kurt, Schwarz-Sommer, Zsuzsanna, Sommer, Hans, Saedler, Heinz, ...
The class B MADS box transcription factors DEFICIENS (DEF) and GLOBOSA (GLO) of Antirrhinum majus together control the organogenesis of petals and stamens. Toward an understanding of how the...
Systematic interpretation of microarray data using experiment annotations
Fellenberg, Kurt, Busold, Christian H, Witt, Olaf, Bauer, Andrea, Beckmann, Boris, Hauser, Nicole C, ...
Hartmann, Claudia, Benz, Corinna, Brems, Stefanie, Ellis, Louise, Luu, Van-Duc, Stewart, Mhairi, ...
In the African trypanosome Trypanosoma brucei nearly all control of gene expression is posttranscriptional; sequences in the 3′-untranslated regions of mRNAs determine the steady-state mRNA levels...
Genotypic resistance testing in HIV by arrayed primer extension
Schanné, Michaela, Bodem, Jochen, Gerhold-Ay, Aslihan, Jacob, Anette, Fellenberg, Kurt, Kräusslich, Hans-Georg, ...
The analysis of mutations that are associated with the occurrence of drug resistance is important for monitoring the antiretroviral therapy of patients infected with human immunodeficiency virus...
Whole Genome Analysis of a Wine Yeast Strain
Hauser, Nicole C., Fellenberg, Kurt, Gil, Rosario, Bastuck, Sonja, Hoheisel, Jörg D., Pérez-Ortín, José E.
Saccharomyces cerevisiae strains frequently exhibit rather specific phenotypic features needed for adaptation to a special environment. Wine yeast strains are able to ferment musts, for example,...
Use of Complex DNA and Antibody Microarrays as Tools in Functional Analyses
Bauer, Andrea, Beckmann, Boris, Busold, Christian, Brandt, Ole, Kusnezow, Wlad, Pullat, Janne, ...
While the deciphering of basic sequence information on a genomic scale is yielding complete genomic sequences in ever-shorter intervals, experimental procedures for elucidating the cellular effects...