Li Ding

Publication List Details

Period

1989 - 2009

Number

131

Co-Authors

A Semantic Wiki Based Light-Weight Web Application Model (2009)

Bao, Jie, Ding, Li, Huang, Rui, Smart, Paul, Braines, Dave, Jones, Gareth

Wikis are a well-known Web 2.0 content management platform. The recent introduction of semantic wikis extends the capabilities of conventional wikis by allowing users to edit and query structured...

Rule Modeling Using Semantic MediaWiki (2009)

Bao, Jie, Ding, Li, Smart, Paul R, Braines, Dave, Jones, Gareth

Semantic MediaWiki (SMW) is a popular semantic wiki engine that enables collective knowledge modeling within the expressivity of a small subset of OWL. However, SMW is limited in offering native...

Presenting TSTP Proofs with Inference Web Tools (2009)

Geoff Sutcliffe, Cynthia Chang, Li Ding, Nick Del Rio, Deborah Mcguinness

Abstract. This paper describes the translation of proofs in the Thousands of Solutions from Theorem Provers (TSTP) solution library to the Proof Markup Language (PML), and the subsequent use of...

The TW Wine Agent: A Social Semantic Web Demo (2009)

James R. Michaelis, Li Ding, Deborah L. Mcguinness

The Tetherless World (TW) Wine Agent extends the original Stanford Knowledge Systems Laboratory (KSL) Wine Agent to support collective recommendations on food-wine pairings. This is done to (1)...

Characterizing and Detecting Integrity Issues in OWL Instance Data (2009)

Jiao Tao, Li Ding, Jie Bao, Deborah L. Mcguinness

Abstract. We view OWL instance data evaluation as a process in which instance data is checked for conformance with application requirements. We previously identified some integrity issues raised by...

TAGA: Travel Market Framework in Agentcities (2009)

Youyong Zou, Tim Finin, Li Ding, Harry Chen, Rong Pan

Travel Agent Game in Agentcities (TAGA) is a framework that extends and enhances the Trading Agent Competition (TAC) system to work in Agentcities, an open multiagent systems environment of FIPA...

TAGA: Travel Market Framework in Agentcities (2009)

Youyong Zou, Tim Finin, Li Ding

Travel Agent Game in Agentcities (TAGA) is a framework that extends and enhances the Trading Agent Competition (TAC) system to work in the Agentcities environment. Auction services are added to...

ABSTRACT Towards Social Webtops Using Semantic Wiki (2009)

Jie Bao, Li Ding, Deborah Mcguinness, James Hendler

The fast-growing Web 2.0 applications promote explicit social structure and explosive data on the Web, and enable the realization of social webtops, where users use web applications to...

Dynamic routing of customers with general delay costs. (2009)

Argon, Nilay Tanik, Ding, Li, Glazebrook, Kevin D., Ziya, Serhan

We consider a network of parallel service stations each modeled as a single-server queue. Each station serves its own dedicated customers as well as generic customers who are routed from a central...

Three LIF-dependent signatures and gene clusters with atypical expression profiles, identified by transcriptome studies in mouse ES cells and early derivatives (2009)

Trouillas, Marina, Saucourt, Claire, Guillotin, Bertrand, Gauthereau, Xavier, Ding, Li, Buchholz, Frank, ...

Abstract Background Mouse embryonic stem (ES) cells remain pluripotent in vitro when grown in the presence of the cytokine Leukaemia Inhibitory Factor (LIF). Identification of LIF targets and of...

Towards a Semantic Web Testbed for Collaborative Policy Development (2009)

Ding, Li, Krasnow Waterman, K., Bao, Jie, Kagal, Lalana, L. McGuinness, Deborah

We aim to improve accountability of distributed data usage by creating tools to support collaborative online development of scenarios and policy infrastructure. This paper reports on our design and...

Semantic web for integrated network analysis in biomedicine (2009)

Chen, Huajun, Ding, Li, Wu, Zhaohui, Yu, Tong, Dhanapalan, Lavanya, Chen, Jake Y.

The Semantic Web technology enables integration of heterogeneous data on the World Wide Web by making the semantics of data explicit through formal ontologies. In this article, we survey the...

VarScan: variant detection in massively parallel sequencing of individual and pooled samples (2009)

Koboldt, Daniel C., Chen, Ken, Wylie, Todd, Larson, David E., McLellan, Michael D., Mardis, Elaine R., ...

Summary: Massively parallel sequencing technologies hold incredible promise for the study of DNA sequence variation, particularly the identification of variants affecting human disease. The...

On Optimal Tapering of FET Chains in High-Speed CMOS Circuits (2008)

Li Ding, Student Member, Pinaki Mazumder

Abstract—Transistor tapering is a widely used technique applied to optimize the geometries of CMOS transistors in high-performance circuit design with a view to minimizing the delay of a FET...

Advances of Tandem MS Functions with a Digital Ion Trap: High Resolution Precursor Isolation and ECD (2008)

L Ding, M Sudakov, Fl Brancia, R Giles, S Kumashiro, J. Mass Spectrom, ...

Driven by a digital waveform and using frequency scan, the digital ion trap mass spectrometer provides wide mass scan range and yet very high mass resolution[1]. Here, the digital waveform is...

Minor(s): Professional publications: (2008)

Li Ding, Pranam Kolari, Shashidhara Ganjugunte, Tim Finin, Anupam Joshi

’03). Title of Thesis: Extending Reasoning Infrastructure for Rules on the Semantic Web:

ABSTRACT Weaving the Web of Belief into the Semantic Web (2008)

Li Ding

Collaboration, especially knowledge sharing, enables the advance of science as well as human society. In cyberspace, socializing the traditionally isolated intelligent software agents is an ultimate...

Photon-induced production of the mirror quarks from the $LHT$ model at the $LHC$ (2008)

Yue, Chong-Xing, Liu, Jin-Yan, Ding, Li, Liu, Wei, Ma, Wei

The photon-induced processes at the $LHC$ provide clean experimental conditions due to absence of the proton remnants, which might produce complementary and interesting results for tests of the...

Somatic mutations affect key pathways in lung adenocarcinoma (2008)

Ding, Li, Getz, Gad, Wheeler, David A., Mardis, Elaine R., McLellan, Michael D., Cibulskis, Kristian, ...

Determining the genetic basis of cancer requires comprehensive analyses of large collections of histopathologically well- classified primary tumours. Here we report the results of a collaborative...

Production of the neutral top-pion $\pi_{t}^{0}$ in association with a high-$p_{T}$ jet at the $LHC$ (2008)

Zhu, Shi-Hai, Yue, Chong-Xing, Liu, Wei, Ding, Li

In the framework of the topcolor-assisted technicolor $(TC2)$ model, we study production of the neutral top-pion $\pi_{t}^{0}$ in association with a high-$p_{T}$ jet at the $LHC$, which proceeds via...

H.263 Facial Video Image Coding with the MELP (2008)

Voice Codec, Kunio Takaya, Li Ding, Naofumi Aoki

The International Telecommunication Union has put forward a

PERFORMANCE MODELING OF RESONANT TUNNELING BASED RAMS (2008)

Hui Zhang, Pinaki Mazumdel, Li Ding

Tunneling based random-access memories (TRAM’s) have recently garnered a great amount of interests among the memory designers due to their intrinsic merits such as reduced power consumption by...

Dynamic Noise Margin: Definitions and Model (2008)

Li Ding, Pinaki Mazumder

Dynamic noise analysis is greatly needed in place of traditional static noise analysis due to the ever increasingly stringent design requirement for VLSI chips based on very deep submicron process...

Provenance and Search Issues in RDF Data Warehouse (2008)

Li Ding

Effective data management infrastructures are needed by applications to utilize distributed Semantic Web data. RDF databases are available today as large triple stores that manage RDF triples and...

TAGA: Travel Market Framework in Agentcities (2008)

Youyong Zou, Tim Finin, Li Ding, Harry Chen, Rong Pan

Travel Agent Game in Agentcities (TAGA) is a framework that extends and enhances the Trading Agent Competition (TAC) system to work in Agentcities, an open multiagent systems environment of FIPA...

Preface (2008)

Piero A. Bonatti, Li Ding, Tim Finin, Daniel Olmedilla, Ii Piero, A. Bonatti, ...

Policies are pervasive in web applications. They play crucial roles in enhancing security, privacy and usability of distributed services, and indeed may determine the success (or failure) of a web...

Using the Semantic Web to Integrate Ecoinformatics Resources (2008)

Cynthia Sims, Joel Sachs, Rong Pan, Lushan Han, Li Ding, Tim Finin, ...

We demonstrate an end-to-end use case of the semantic web’s utility for synthesizing ecological and environmental data. ELVIS (the Ecosystem Location Visualization and Information System) is a...

Using Ontologies in the Semantic Web: A Survey (2008)

Li Ding, Pranam Kolari, Zhongli Ding, Sasikanth Avancha, Tim Finin, Anupam Joshi, ...

The Semantic Web is well recognized as an effective infrastructure to enhance visibility of knowledge on the Web. The core of the Semantic Web is ontology, which is used to explicitly represent our...

Production of mirror fermions via $e\gamma$ and $ep$ collisions in the littlest Higgs model with T-parity (2008)

Yue, Chong-Xing, Ding, Li, Liu, Jin-Yan

One of the important features of the littlest Higgs model with T-parity, called the $LHT$ model, is that it introduces the mirror fermions, which are the T-parity partners of the standard model...

Strategies and Heuristics Used by the UMBCTAC Agent in the third Trading Agent Competition ∗ (2008)

Li Ding, Tim Finin, Yongmei Shi, Youyong Zou, Zhongli Ding, Rong Pan

The UMBCTAC agent was one of the top ranked agents in the third international Trading Agent Competition (TAC’02). This paper describes and evaluates the key heuristics used by UMBCTAC, including...

Conflict of Interest • Should Arpinar review Verma’s paper? (2008)

Boanerges Aleman-meza, Meenakshi Nagarajan, Cartic Ramakrishnan, Li Ding, Pranam Kolari, Amit P. Sheth, ...

• Situation(s) that may bias a decision • Why it is important to detect COI? – for transparency in circumstances such as contract allocation, IPOs, corporate law, and peer-review of scientific...

Using Ontologies in the Semantic Web: A Survey (2008)

Li Ding, Pranam Kolari, Zhongli Ding, Sasikanth Avancha, Tim Finin, Anupam Joshi

The Semantic Web is well recognized as an effective infrastructure to enhance visibility of knowledge on the Web. The core of the Semantic Web is ontology, which is used to explicitly represent our...

TAGA: Trading Agent Competition in Agentcities 1 (2008)

Youyong Zou, Tim Finin, Li Ding, Harry Chen, Rong Pan

framework that extends and enhances the Trading Agent Competition (TAC) scenario to work in Agentcities, an open multi-agent environment based on FIPA compliant systems. TAGA uses the semantic web...

The new charged gauge boson $W'$ and the subprocess $eq\to\nu q'$ at $e^{+}e^{-}$ and $ep$ colliders (2008)

Yue, Chong-Xing, Ding, Li, Ma, Wei

In the framework of the little Higgs models and the three-site Higgsless model, we discuss the contributions of the new charged gauge boson $W'$ to the process $eq\to\nu q'$ and the possibility of...

Top quark chromomagnetic dipole moment in the littlest Higgs model with T-parity (2008)

Ding, Li, Yue, Chong-Xing

The littlest Higgs model with T-parity, which is called $LHT$ model, predicts the existence of the new particles, such as heavy top quark, heavy gauge bosons, and mirror fermions. We calculate the...

Characterizing the cancer genome in lung adenocarcinoma (2007)

Weir, Barbara A., Woo, Michele S., Getz, Gad, Perner, Sven, Ding, Li, Beroukhim, Rameen, ...

Somatic alterations in cellular DNA underlie almost all human cancers(1). The prospect of targeted therapies(2) and the development of high-resolution, genome-wide approaches(3-8) are now spurring...

TAGA: Trading Agent Competition in Agentcities 1 (2007)

Youyong Zou, Tim Finin, Li Ding, Harry Chen, Rong Pan

Travel Agent Game in Agentcities (TAGA) is a framework that extends and enhances the Trading Agent Competition (TAC) scenario to work in Agentcities, an open multiagent systems environment of FIPA...

Accurate estimating simultaneous switching noises by using application specific device modeling (2007)

Li Ding, Pinaki Mazumder

In this paper, we study the simultaneous switching noise problem by using an application-specific modeling method. A simple yet accurate MOSFET model is proposed in order to derive closed-form...

Optimal Transistor Tapering for High-Speed CMOS Circuits (2007)

Li Ding, Pinaki Mazumder

Transistor tapering is a widely used technique applied to optimize the geometries of CMOS transistors in highperformance circuit design with a view to minimizing the delay of a FET network....

Strategies and Heuristics Used by the UMBCTAC Agent in the third Trading Agent Competition ∗ (2007)

Li Ding, Tim Finin, Yongmei Shi, Youyong Zou, Zhongli Ding, Rong Pan

The UMBCTAC agent was one of the top ranked agents in the third international Trading Agent Competition (TAC’02). This paper describes and evaluates the key heuristics used by UMBCTAC, including...

TAGA: Using Semantic Web Technologies in Multi-Agent Systems (2007)

Youyong Zou, Tim Finin, Li Ding, Harry Chen

Abstract. Travel Agent Game in Agentcities (TAGA) is a framework that extends and enhances the Trading Agent Competition (TAC) scenario to work in Agentcities, an open multi agent environment based...

Associated production of the scalars and new gauge bosons from a little Higgs model at the LHC (2007)

Yue, Chong-Xing, Zhang, Nan, Ding, Li, Zhu, Shi-Hai

The littlest Higgs model with T-parity ($LHT$ model) predicts the existence of the T-odd scalars ($\phi^{\pm}$, $\phi^{0}$, and $\phi^{p}$). We consider production of these new particles associated...

Functional analysis of the essential bifunctional tobacco enzyme 3-dehydroquinate dehydratase/shikimate dehydrogenase in transgenic tobacco plants (2007)

Ding, Li, Hofius, Daniel, Hajirezaei, Mohammad-Reza, Fernie, Alisdair R., Börnke, Frederik, Sonnewald, Uwe

In plants, the shikimate pathway occurs in the plastid and leads to the biosynthesis of aromatic amino acids. The bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase (DHD/SHD) catalyses...

PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data (2007)

Chen, Ken, McLellan, Michael D., Ding, Li, Wendl, Michael C., Kasai, Yumi, Wilson, Richard K., ...

Small insertions and deletions (indels) and single nucleotide polymorphisms (SNPs) are common genetic variants that are thought to be associated with a wide variety of human diseases. Owing to the...

U. S. Households Consumption, A Comprehensive Analysis (2007)

Ding, Li

Consumption is perhaps the most important economic behavior of human beings. To it goes the lion's share of the country's annual product. This study is part of the ongoing efforts to give a...

U. S. Households Consumption, A Comprehensive Analysis (2007)

Ding, Li

Consumption is perhaps the most important economic behavior of human beings. To it goes the lion's share of the country's annual product. This study is part of the ongoing efforts to give a...

Calcineurin-NFATc signaling pathway regulates AQP2 expression in response to calcium signals and osmotic stress (2006)

McDill, Bradley W, Kovach, Paul A, Ding, Li, Go, William Y, Ho, Steffan N, ...

The aquaporin 2 (AQP2) channel mediates the reabsorption of water in renal collecting ducts in response to arginine vasopressin (AVP) and hypertonicity. Here we show that AQP2 expression was induced...

Congenital progressive hydronephrosis (cph) is caused by an S256L mutation in aquaporin-2 that affects its phosphorylation and apical membrane accumulation (2006)

Li, Song-Zhe, Kovach, Paul A, Ding, Li

Congenital progressive hydronephrosis (cph) is a spontaneous recessive mutation that causes severe hydronephrosis and obstructive nephropathy in affected mice. The mutation has been mapped to the...

A Novel Bacterium Associated with Lymphadenitis in a Patient with Chronic Granulomatous Disease (2006)

David E. Greenberg, Li Ding, Adrian M. Zelazny, Frida Stock, Alexandra Wong, Victoria L. Anderson, ...

Chronic granulomatous disease (CGD) is a rare inherited disease of the phagocyte NADPH oxidase system causing defective production of toxic oxygen metabolites, impaired bacterial and fungal killing,...

Computing Trust from Revision History (2006)

Zeng, Honglei, Alhossaini, Maher A., Ding, Li, Fikes, Richard, McGuinness, Deborah L.

A new model of distributed, collaborative information evolution is emerging. As exemplified in Wikipedia, online collaborative information repositories are being generated, updated, and maintained by...

RNAi in embryonic stem cells (2006)

Ding, Li, Buchholz, Frank

Embryonic stem (ES) cells are pluripotent cells that can be isolated and grown in vitro from the inner cell mass of blastocysts. Their potential to differentiate into any cell of the body makes them...

Characterizing the Semantic Web on the Web (2006)

Li Ding, Tim Finin

Abstract. Semantic Web languages are being used to represent, encode and exchange semantic data in many contexts beyond the Web – in databases, multiagent systems, mobile computing, and ad hoc...

Semantic analytics on social networks: experiences in addressing the problem of conflict of interest detection (2006)

Boanerges Aleman-meza, Meenakshi Nagarajan, Cartic Ramakrishnan, Li Ding, Pranam Kolari, Amit P. Sheth, ...

In this paper, we describe a Semantic Web application that detects Conflict of Interest (COI) relationships among potential reviewers and authors of scientific papers. This application discovers...

Semantic analytics on social networks: experiences in addressing the problem of conflict of interest detection (2006)

Boanerges Aleman-meza, Meenakshi Nagarajan, Cartic Ramakrishnan, Li Ding, Pranam Kolari, Amit P. Sheth, ...

In this paper, we describe a Semantic Web application that detects Conflict of Interest (COI) relationships among potential reviewers and authors of scientific papers. This application discovers...

Enhancing Semantic Web Data Access (2006)

Dissertation Dr, Tim Finin, Li Ding, Li Ding

The Semantic Web was invented by Tim Berners-Lee in 1998 as a web of data for machine consumption. Its applicability in supporting real world applications on the World Wide Web, however, remains...

Investigation into trust for collaborative information repositories: A Wikipedia case study (2006)

Deborah L. Mcguinness, Honglei Zeng, Li Ding, Dhyanesh Narayanan, Mayukh Bhaowal

As collaborative repositories grow in popularity and use, issues concerning the quality and trustworthiness of information grow. Some current popular repositories contain contributions from a wide...

Search Engines for Semantic Web Knowledge (2006)

Tim Finin, Li Ding

Web search engines like Google have made people “smarter ” by providing ready access to the world's knowledge whenever they need to look up a fact, learn about a topic or evaluate opinions....

CCNs, fibulin-1C and S100A4 expression in leiomyoma and myometrium: inverse association with TGF-{beta} and regulation by TGF-{beta} in leiomyoma and myometrial smooth muscle cells (2006)

Luo, Xiaoping, Ding, Li, Chegini, Nasser

Connective tissue growth factor (CTGF; CCN2) is considered to serve as downstream midiator of TGF-β action in tissue fibrosis. We tested this hypothesis in paired leiomyoma and myometrium by...

CCNs, fibulin-1C and S100A4 expression in leiomyoma and myometrium: inverse association with TGF-{beta} and regulation by TGF-{beta} in leiomyoma and myometrial smooth muscle cells (2006)

Luo, Xiaoping, Ding, Li, Chegini, Nasser

Connective tissue growth factor (CTGF; CCN2) is considered to serve as downstream midiator of TGF-β action in tissue fibrosis. We tested this hypothesis in paired leiomyoma and myometrium by...

Performance Modeling of Resonant Tunneling-Based Random-Access Memories (2005)

Zhang, Hui, Mazumder, Pinaki, Ding, Li, Yang, Kyounghoon

Resonant tunneling-based random-access memories(TRAMs) have recently garnered a great amount of interest among memory designers due to their intrinsic merits such as reduced power consumption by...

Search on the semantic web (2005)

Li Ding, Tim Finin, Anupam Joshi, Yun Peng, Rong Pan, Pavan Reddivari

The Semantic Web provides a way to encode information and knowledge on web pages in a form that is easier for computers to understand and process. This article discusses the issues underlying the...

Enhancing web privacy protection through declarative policies (2005)

Pranam Kolari, Li Ding, Shashidhara G, Anupam Joshi, Tim Finin

The Platform for Privacy Preferences (P3P) is a W3C framework for web privacy management. It provides a standard vocabulary that websites can use to describe their privacy practices. The presence of...

Search on the semantic web (2005)

Li Ding, Tim Finin, Anupam Joshi, Yun Peng, Rong Pan, Pavan Reddivari, ...

The Semantic Web provides a way to encode information and knowledge on web pages in a form that is easier for computers to understand and process. This article discusses the issues underlying the...

On Homeland Security and the Semantic Web: (2005)

Provenance And Trust, Li Ding, Pranam Kolari, Tim Finin, Anupam Joshi, Yun Peng, ...

This paper focuses on one type of semantic association which is a simple path linking two RDF nodes in an given RDF graph, e.g. Mr. X Company A# Organization B, Osama Bin Laden

Tracking RDF Graph Provenance using RDF Molecules (2005)

Li Ding, Tim Finin, Yun Peng, Deborah L

Abstract. The Semantic Web can be viewed as one large “universal” RDF graph distributed across many Web pages. This is an impractical for many reasons, so we usually work with a decomposition...

Search on the semantic web (2005)

Li Ding, Tim Finin, Anupam Joshi, Yun Peng, Rong Pan, Pavan Reddivari

The Semantic Web provides a way to encode information and knowledge on web pages in a form that is easier for computers to understand and process. This article discusses the issues underlying the...

Swoogle: Searching for knowledge on the Semantic Web (2005)

Tim Finin, Li Ding, Rong Pan, Anupam Joshi, Pranam Kolari, Akshay Java, ...

Most knowledge on the Web is encoded as natural language text, which is convenient for human users but very difficult for software agents to understand. Even with increased use of XML-encoded...

A.: Analyzing Social Networks on the Semantic Web (2005)

Li Ding, Tim Finin, Anupam Joshi

The past year has seen a dramatic increase in the amount of social information published in RDF documents. Our investigations [1, 2] show that the Friend of a Friend (FOAF) ontology [3] is among the...

How the Semantic Web is Being Used: An Analysis of FOAF Documents (2005)

Li Ding, Lina Zhou, Tim Finin, Anupam Joshi

Abstract — Semantic Web researchers have initially focused on the representation, development and use of ontologies but paid less attention to the social and structural relationships involved. The...

Finding and Ranking Knowledge on the Semantic Web (2005)

Li Ding, Rong Pan, Tim Finin, Anupam Joshi, Yun Peng, Pranam Kolari

Abstract. Swoogle helps software agents and knowledge engineers find Semantic Web knowledge encoded in RDF and OWL documents on the Web. Navigating such a Semantic Web on the Web is difficult due to...

A.: Analyzing Social Networks on the Semantic Web (2005)

Tim Finin, Li Ding, Lina Zou

The Semantic Web promised to enable a new generation of intelligent applications by providing programs and software agents with rich and effective ways to share information and knowledge. The...

On homeland security and the semantic web: A provenance and trust aware inference framework (2005)

Li Ding, Pranam Kolari, Tim Finin, Anupam Joshi, Yun Peng, Yelena Yesha

Discovering and evaluating interesting patterns and semantic associations in vast amount of information provided by many different sources is an important and time-consuming work for homeland...

Tracking RDF Graph Provenance using RDF Molecules (2005)

Li Ding, Tim Finin, Yun Peng, Deborah L

Abstract. The Semantic Web facilitates integrating partial knowledge and finding evidence for hypothesis from web knowledge sources. However, the appropriate level of granularity for tracking...

Finding and Ranking Knowledge on the Semantic Web (2005)

Li Ding, Rong Pan, Tim Finin, Anupam Joshi, Yun Peng, Pranam Kolari

Abstract. Swoogle is a system that helps knowledge engineers and software agents find knowledge on the web encoded in the semantic web languages RDF and OWL. Based on the search mechanisms provided...

On Boosting Semantic Web Data Access (2005)

Li Ding

The Semantic Web can be viewed as a collection of RDF graphs serialized by RDF documents that distributed in the Web. Its utility depends on three issues: availability (existence of data),...

Finding and Ranking Knowledge on the Semantic Web (2005)

Li Ding, Rong Pan, Tim Finin, Anupam Joshi, Yun Peng, Pranam Kolari

Abstract. Swoogle is a system that helps knowledge engineers and software agents find knowledge on the web encoded in the semantic web languages RDF and OWL. Based on the search mechanisms provided...

Fibromodulin is expressed in leiomyoma and myometrium and regulated by gonadotropin-releasing hormone analogue therapy and TGF-{beta} through Smad and MAPK-mediated signalling (2005)

Levens, Eric, Luo, Xiaoping, Ding, Li, Williams, R.Stan, Chegini, Nasser

Microarray gene expression profiling revealed fibromodulin (FMOD) is among differentially expressed genes in leiomyoma (L) and myometrium. Using realtime PCR, western blotting and...

Fibromodulin is expressed in leiomyoma and myometrium and regulated by gonadotropin-releasing hormone analogue therapy and TGF-{beta} through Smad and MAPK-mediated signalling (2005)

Levens, Eric, Luo, Xiaoping, Ding, Li, Williams, R. Stan, Chegini, Nasser

Microarray gene expression profiling revealed fibromodulin (FMOD) is among differentially expressed genes in leiomyoma (L) and myometrium. Using realtime PCR, western blotting and...

Modeling and evaluating trust network inference (2004)

Li Ding, Pranam Kolari, Shashidhara Ganjugunte, Tim Finin, Anupam Joshi

The growth in knowledge sharing enabled by the (Semantic) Web has made trust an increasingly critical issue. Based on explicit inter-agent trust relations, a trust network emerges on the (Semantic)...

Swoogle: A search and metadata engine for the semantic web (2004)

Tim Finin, Yun Peng, R. Scott, Cost Joel, Sachs Anupam Joshi, Pavan Reddivari, ...

Swoogle is a crawler-based indexing and retrieval system for the Semantic Web documents – i.e., RDF or OWL documents. It analyzes the documents it discovered to compute useful metadata properties...

Enhancing P3P Framework through Policies and Trust (2004)

Pranam Kolari, Li Ding, Lalana Kagal, Shashidhara Ganjugunte, Anupam Joshi, Tim Finin

Abstract. The Platform for Privacy Preferences (P3P) is a W3C standard that websites can use to describe their privacy practices. The presence of P3P policies enable users to configure web browsers...

EAnnot: A genome annotation tool using experimental evidence (2004)

Ding, Li, Sabo, Aniko, Berkowicz, Nicolas, Meyer, Rekha R., Shotland, Yoram, Johnson, Mark R., ...

The sequence of any genome becomes most useful for biological experimentation when a complete and accurate gene set is available. Gene prediction programs offer an efficient way to generate an...

PERFORMANCE MODELING OF RESONANT TUNNELING BASED RAMS (2003)

Zhang, Hui, Mazumder, Pinaki, Ding, Li, Yang, Kyounghoon

Tunneling based random-access memories (TRAM’s) have recently garnered a great amount of interests among the memory designers due to their intrinsic merits such as reduced power consumption by...

An Approach for Recording Multimedia Collaborative Sessions: Design and Implementation (2003)

Shervin Shirmohammadi, Li Ding, Nicolas Georganas

In this article we present the design and implementation of a videoconferencing session recorder multimedia system. Our system is a videoconferencing tool that has the capability of recording live...

Using semantic web technology in multi-agent systems: a case study in the TAGA trading agent environment (2003)

Youyong Zou, Tim Finin, Li Ding, Harry Chen, Rong Pan

Travel Agent Game in Agentcities (TAGA) is the framework that extends and enhances the Trading Agent Competition (TAC) scenario to work in Agentcities, an open multi agent environment based on FIPA...

An Approach for Recording Multimedia Collaborative Sessions: (2003)

Design And Implementation, Shervin Shirmohammadi, Li Ding, Nicolas Georganas

In this article we present the design and implementation of a videoconferencing session recorder multimedia system. Our system is a videoconferencing tool that has the capability of recording live...

Modeling Noise Transfer Characteristic of Dynamic Logic Gates (2003)

Li Ding And, Li Ding, Pinaki Mazumder

Dynamic noise analysis is recently gaining more attention as a definitive method to overcome glaring deficiencies of static noise analysis. Exact dynamic noise analysis requires modeling of both...

Efficient Crosstalk Noise Modeling Using Aggressor and Tree (2002)

Li Ding, David Blaauw, Pinaki Mazumder

This paper describes a fast method to estimate crosstalk noise in the presence of multiple aggressor nets for use in physical design automation tools. Since noise estimation is often part of the...

Observations of Breaking Waves Using Vertical Line Arrays. (1998)

Ding, Li

Ambient noise data were collected with two vertical arrays during a surface breaking wave experiment conducted 22 March-5 April 1995, North East of San Clemente Island. Conventional beamforming is...

Enhancing P3P Framework through Policies and Trust (1998)

Kolari, Pranam, Ding, Li, Kagal, Lalana, Anupam Joshi, Shashidhara G., Finin, Tim

The Platform for Privacy Preferences (P3P) is a W3C standard that web sites can use to describe their privacy practices. The presence of P3P policies enables users to configure web browsers to...

Modeling and Evaluating Trust Network Inference (1998)

Ding, Li, Kolari, Pranam, Ganjugunte, Shashidhara, Finin, Tim, Joshi, Anupam

The growth in knowledge sharing enabled by the (Semantic) Web has made trust an increasingly critical issue. Based on explicit inter-agent trust relations, a trust network emerges on the (Semantic)...

Strategies and Heuristics Used by the UMBCTAC Agent in the Third Trading Agent Competition (1998)

Ding, Li, Finin, Tim, Shi, Youngmei, Zou, Youyong, Ding, Zhongli, Pan, Rong

The UMBCTAC agent was one of the top ranked agents in the third international Trading Agent Competition (TAC'02). This paper describes and evaluates the key heuristics used by UMBCTAC. including the...

Molecular cloning, characterization, and regulation of diacylglycerol kinases. (1998)

Ding, Li;

Diacylglycerol (DAG) is a key intermediate in the synthesis of complex lipids and serves as an important second messenger. DAG exerts its signaling function by activation protein kinase C (PKC)....

Molecular cloning, characterization, and regulation of diacylglycerol kinases. (1998)

Ding, Li;

Diacylglycerol (DAG) is a key intermediate in the synthesis of complex lipids and serves as an important second messenger. DAG exerts its signaling function by activation protein kinase C (PKC)....

An object-oriented building information system / (1996)

Ding, Li.

Thesis (M.S.)--University of Cincinnati, 1996.

Alternative splicing of the human diacylglycerol kinase ζ gene in muscle

Ding, Li, Bunting, Michaeline, Topham, Matthew K., McIntyre, Thomas M., Zimmerman, Guy A., Prescott, Stephen M.

Diacylglycerol can function as a second messenger, and one mechanism for the attenuation of this signal is its conversion to phosphatidic acid, which is catalyzed by diacylglycerol kinase (DGK). We...

Phagocyte NADPH Oxidase, but Not Inducible Nitric Oxide Synthase, Is Essential for Early Control of Burkholderia cepacia and Chromobacterium violaceum Infection in Mice

Segal, Brahm H., Ding, Li, Holland, Steven M.

Reactive oxygen and nitrogen intermediates have critical, partially overlapping roles in host defense against a variety of pathogens. Using mice deficient in generating phagocyte superoxide...

EAnnot: A genome annotation tool using experimental evidence

Ding, Li, Sabo, Aniko, Berkowicz, Nicolas, Meyer, Rekha R., Shotland, Yoram, Johnson, Mark R., ...

The sequence of any genome becomes most useful for biological experimentation when a complete and accurate gene set is available. Gene prediction programs offer an efficient way to generate an...

ADAR1 Interacts with NF90 through Double-Stranded RNA and Regulates NF90-Mediated Gene Expression Independently of RNA Editing

Nie, Yongzhan, Ding, Li, Kao, Peter N., Braun, Robert, Yang, Jing-Hua

The RNA-editing enzyme ADAR1 modifies adenosines by deamination and produces A-to-I mutations in mRNA. ADAR1 was recently demonstrated to function in host defense and in embryonic erythropoiesis...

A Novel Bacterium Associated with Lymphadenitis in a Patient with Chronic Granulomatous Disease

Greenberg, David E, Ding, Li, Zelazny, Adrian M, Stock, Frida, Wong, Alexandra, Anderson, Victoria L, ...

Chronic granulomatous disease (CGD) is a rare inherited disease of the phagocyte NADPH oxidase system causing defective production of toxic oxygen metabolites, impaired bacterial and fungal killing,...

Congenital progressive hydronephrosis (cph) is caused by an S256L mutation in aquaporin-2 that affects its phosphorylation and apical membrane accumulation

McDill, Bradley W., Li, Song-Zhe, Kovach, Paul A., Ding, Li, Chen, Feng

Congenital progressive hydronephrosis (cph) is a spontaneous recessive mutation that causes severe hydronephrosis and obstructive nephropathy in affected mice. The mutation has been mapped to the...

Alternative splicing of the human diacylglycerol kinase ζ gene in muscle

Ding, Li, Bunting, Michaeline, Topham, Matthew K., McIntyre, Thomas M., Zimmerman, Guy A., Prescott, Stephen M.

Diacylglycerol can function as a second messenger, and one mechanism for the attenuation of this signal is its conversion to phosphatidic acid, which is catalyzed by diacylglycerol kinase (DGK). We...

Phagocyte NADPH Oxidase, but Not Inducible Nitric Oxide Synthase, Is Essential for Early Control of Burkholderia cepacia and Chromobacterium violaceum Infection in Mice

Segal, Brahm H., Ding, Li, Holland, Steven M.

Reactive oxygen and nitrogen intermediates have critical, partially overlapping roles in host defense against a variety of pathogens. Using mice deficient in generating phagocyte superoxide...

EAnnot: A genome annotation tool using experimental evidence

Ding, Li, Sabo, Aniko, Berkowicz, Nicolas, Meyer, Rekha R., Shotland, Yoram, Johnson, Mark R., ...

The sequence of any genome becomes most useful for biological experimentation when a complete and accurate gene set is available. Gene prediction programs offer an efficient way to generate an...

ADAR1 Interacts with NF90 through Double-Stranded RNA and Regulates NF90-Mediated Gene Expression Independently of RNA Editing

Nie, Yongzhan, Ding, Li, Kao, Peter N., Braun, Robert, Yang, Jing-Hua

The RNA-editing enzyme ADAR1 modifies adenosines by deamination and produces A-to-I mutations in mRNA. ADAR1 was recently demonstrated to function in host defense and in embryonic erythropoiesis...

A Novel Bacterium Associated with Lymphadenitis in a Patient with Chronic Granulomatous Disease

Greenberg, David E, Ding, Li, Zelazny, Adrian M, Stock, Frida, Wong, Alexandra, Anderson, Victoria L, ...

Chronic granulomatous disease (CGD) is a rare inherited disease of the phagocyte NADPH oxidase system causing defective production of toxic oxygen metabolites, impaired bacterial and fungal killing,...

Congenital progressive hydronephrosis (cph) is caused by an S256L mutation in aquaporin-2 that affects its phosphorylation and apical membrane accumulation

McDill, Bradley W., Li, Song-Zhe, Kovach, Paul A., Ding, Li, Chen, Feng

Congenital progressive hydronephrosis (cph) is a spontaneous recessive mutation that causes severe hydronephrosis and obstructive nephropathy in affected mice. The mutation has been mapped to the...

PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data

Chen, Ken, McLellan, Michael D., Ding, Li, Wendl, Michael C., Kasai, Yumi, Wilson, Richard K., ...

Small insertions and deletions (indels) and single nucleotide polymorphisms (SNPs) are common genetic variants that are thought to be associated with a wide variety of human diseases. Owing to the...

The GABAA receptor α1 subunit epilepsy mutation A322D inhibits transmembrane helix formation and causes proteasomal degradation

Gallagher, Martin J., Ding, Li, Maheshwari, Ankit, Macdonald, Robert L.

A form of autosomal dominant juvenile myoclonic epilepsy is caused by a nonconservative missense mutation, A322D, in the GABAA receptor α1 subunit M3 transmembrane helix. We reported previously that...

The chromosome 3p21.3-encoded gene, LIMD1, is a critical tumor suppressor involved in human lung cancer development

Sharp, Tyson V., Al-Attar, Ahmad, Foxler, Daniel E., Ding, Li, De A. Vallim, Thomas Q., Zhang, Yining, ...

Loss of heterozygosity (LOH) and homozygous deletions at chromosome 3p21.3 are common in both small and nonsmall cell lung cancers, indicating the likely presence of tumor suppressor genes (TSGs)....

Mycobacterium abscessus and M. avium Trigger Toll-Like Receptor 2 and Distinct Cytokine Response in Human Cells

Sampaio, Elizabeth P., Elloumi, Houda Z., Zelazny, Adrian, Ding, Li, Paulson, Michelle L., Sher, Alan, ...

Mycobacterium avium (MAV) and M. abscessus (MAB) are ubiquitous environmental organisms increasingly recognized to cause chronic lung disease in patients with apparently normal immune function....

Pulmonary Nontuberculous Mycobacterial Disease: Prospective Study of a Distinct Preexisting Syndrome

Kim, Richard D., Greenberg, David E., Ehrmantraut, Mary E., Guide, Shireen V., Ding, Li, Shea, Yvonne, ...

Rationale: Pulmonary nontuberculous mycobacterial (PNTM) disease is increasing, but predisposing features have been elusive.