Luc J. Smink

Publication List Details

Period

1996 - 2007

Number

29

Co-Authors

Genome bioinformatic analysis of nonsynonymous SNPs (2007)

Burke, David F, Worth, Catherine L, Priego, Eva-Maria, Cheng, Tammy, Smink, Luc J, Todd, John A, ...

Abstract Background Genome-wide association studies of common diseases for common, low penetrance causal variants are underway. A proportion of these will alter protein sequences, the most common of...

Sequencing and association analysis of the type 1 diabetes – linked region on chromosome 10p12-q11 (2007)

Nejentsev, Sergey, Smink, Luc J, Smyth, Deborah, Bailey, Rebecca, Lowe, Christopher E, Payne, Felicity, ...

Abstract Background In an effort to locate susceptibility genes for type 1 diabetes (T1D) several genome-wide linkage scans have been undertaken. A chromosomal region designated IDDM10 retained...

T1DBase: integration and presentation of complex data for type 1 diabetes research (2007)

Hulbert, Erin M., Smink, Luc J., Adlem, Ellen C., Allen, James E., Burdick, David B., Burren, Oliver S., ...

T1DBase (http://T1DBase.org) [Smink et al. (2005) Nucleic Acids Res., 33, D544–D549; Burren et al. (2004) Hum. Genomics, 1, 98–109] is a public website and database that supports the type 1...

Discovery, linkage disequilibrium and association analyses of polymorphisms of the immune complement inhibitor, decay-accelerating factor gene (DAF/CD55) in type 1 diabetes (2006)

Taniguchi, Hidenori, Lowe, Christopher E, Cooper, Jason D, Smyth, Deborah J, Bailey, Rebecca, Nutland, Sarah, ...

Abstract Background Type 1 diabetes (T1D) is a common autoimmune disease resulting from T-cell mediated destruction of pancreatic beta cells. Decay accelerating factor (DAF, CD55), a...

T1DBase: integration and presentation of complex data for type 1 diabetes research (2006)

Hulbert, Erin M., Smink, Luc J., Adlem, Ellen C., E. Allen, James, Burdick, David B., Burren, Oliver S., ...

T1DBase (http://T1DBase.org) [Smink et al. (2005) Nucleic Acids Res., 33, D544–D549; Burren et al. (2004) Hum. Genomics, 1, 98–109] is a public website and database that supports the type 1...

T1DBase: integration and presentation of complex data for type 1 diabetes research (2006)

Hulbert, Erin M., Smink, Luc J., Adlem, Ellen C., E. Allen, James, Burdick, David B., Burren, Oliver S., ...

T1DBase (http://T1DBase.org) [Smink et al. (2005) Nucleic Acids Res., 33, D544–D549; Burren et al. (2004) Hum. Genomics, 1, 98–109] is a public website and database that supports the type 1...

Construction and analysis of tag single nucleotide polymorphism maps for six human-mouse orthologous candidate genes in type 1 diabetes (2005)

Maier, Lisa M, Smyth, Deborah J, Vella, Adrian, Payne, Felicity, Cooper, Jason D, Pask, Rebecca, ...

Abstract Background One strategy to help identify susceptibility genes for complex, multifactorial diseases is to map disease loci in a representative animal model of the disorder. The nonobese...

T1DBase, a community web-based resource for type 1 diabetes research (2005)

Smink, Luc J., Helton, Erin M., Healy, Barry C., Cavnor, Christopher C., Lam, Alex C., Flamez, Daisy, ...

T1DBase (http://T1DBase.org) is a public website and database that supports the type 1 diabetes (T1D) research community. The site is currently focused on the molecular genetics and biology of T1D...

Investigating the utility of combining Φ29 whole genome amplification and highly multiplexed single nucleotide polymorphism BeadArray™ genotyping (2004)

Pask, Rebecca, Rance, Helen E, Barratt, Bryan J, Nutland, Sarah, Smyth, Deborah J, Sebastian, Meera, ...

Abstract Background Sustainable DNA resources and reliable high-throughput genotyping methods are required for large-scale, long-term genetic association studies. In the genetic dissection of common...

Reevaluating Human Gene Annotation: A Second-Generation Analysis of Chromosome 22 (2003)

Collins, John E., Goward, Melanie E., Cole, Charlotte G., Smink, Luc J., Huckle, Elizabeth J., Knowles, Sarah, ...

We report a second-generation gene annotation of human chromosome 22. Using expressed sequence databases, comparative sequence analysis, and experimental verification, we have extended genes, fused...

A bacterial artificial chromosome-based framework contig map of human chromosome 22q (1996)

Kim, Ung-Jin, Shizuya, Hiroaki, Kang, Hyung-Lyun, Choi, Sun-Shim, Garrett, Charmain L., Smink, Luc J., ...

We have constructed a physical map of human chromosome 22q using bacterial artificial chromosome (BAC) clones. The map consists of 613 chromosome 22-specific BAC clones that have been localized and...

A SNP Resource for Human Chromosome 22: Extracting Dense Clusters of SNPs From the Genomic Sequence

Dawson, Elisabeth, Chen, Yuan, Hunt, Sarah, Smink, Luc J., Hunt, Adrienne, Rice, Kate, ...

The recent publication of the complete sequence of human chromosome 22 provides a platform from which to investigate genomic sequence variation. We report the identification and characterization of...

Reevaluating Human Gene Annotation: A Second-Generation Analysis of Chromosome 22

Collins, John E., Goward, Melanie E., Cole, Charlotte G., Smink, Luc J., Huckle, Elizabeth J., Knowles, Sarah, ...

We report a second-generation gene annotation of human chromosome 22. Using expressed sequence databases, comparative sequence analysis, and experimental verification, we have extended genes, fused...

T1DBase, a community web-based resource for type 1 diabetes research

Smink, Luc J., Helton, Erin M., Healy, Barry C., Cavnor, Christopher C., Lam, Alex C., Flamez, Daisy, ...

T1DBase (http://T1DBase.org) is a public website and database that supports the type 1 diabetes (T1D) research community. The site is currently focused on the molecular genetics and biology of T1D...

A SNP Resource for Human Chromosome 22: Extracting Dense Clusters of SNPs From the Genomic Sequence

Dawson, Elisabeth, Chen, Yuan, Hunt, Sarah, Smink, Luc J., Hunt, Adrienne, Rice, Kate, ...

The recent publication of the complete sequence of human chromosome 22 provides a platform from which to investigate genomic sequence variation. We report the identification and characterization of...

Reevaluating Human Gene Annotation: A Second-Generation Analysis of Chromosome 22

Collins, John E., Goward, Melanie E., Cole, Charlotte G., Smink, Luc J., Huckle, Elizabeth J., Knowles, Sarah, ...

We report a second-generation gene annotation of human chromosome 22. Using expressed sequence databases, comparative sequence analysis, and experimental verification, we have extended genes, fused...

T1DBase, a community web-based resource for type 1 diabetes research

Smink, Luc J., Helton, Erin M., Healy, Barry C., Cavnor, Christopher C., Lam, Alex C., Flamez, Daisy, ...

T1DBase (http://T1DBase.org) is a public website and database that supports the type 1 diabetes (T1D) research community. The site is currently focused on the molecular genetics and biology of T1D...

T1DBase: integration and presentation of complex data for type 1 diabetes research

Hulbert, Erin M., Smink, Luc J., Adlem, Ellen C., Allen, James E., Burdick, David B., Burren, Oliver S., ...

T1DBase () [Smink et al. (2005) Nucleic Acids Res., 33, D544–D549; Burren et al. (2004) Hum. Genomics, 1, 98–109] is a public website and database that supports the type 1 diabetes (T1D) research...