Reece-Hoyes, John S., Deplancke, Bart, Barrasa, M. Inmaculada, Hatzold, Julia, Smit, Ryan B., Arda, H. Efsun, ...
Snail-type transcription factors (TFs) are found in numerous metazoan organisms and function in a plethora of cellular and developmental processes including mesoderm and neuronal development,...
Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity (2008)
Martinez, Natalia Julia, Ow, Maria C., Reece-Hoyes, John S., Barrasa, M. Inmaculada, Ambros, Victor R., Walhout, Albertha J. M.
The Caenorhabditis elegans genome encodes more than 100 microRNAs (miRNAs). Genetic analyses of miRNA deletion mutants have only provided limited insights into miRNA function. To gain insight into...
Martinez, Natalia J., Ow, Maria C., Barrasa, M. Inmaculada, Hammell, Molly, Sequerra, Reynaldo, Doucette-Stamm, Lynn, ...
MicroRNAs (miRNAs) and transcription factors (TFs) are primary metazoan gene regulators. Whereas much attention has focused on finding the targets of both miRNAs and TFs, the transcriptional networks...
Ow, Maria C., Martinez, Natalia J., Olsen, Philip H., Silverman, Howard S., Barrasa, M. Inmaculada, Conradt, Barbara, ...
MicroRNAs (miRNAs) are small noncoding RNAs that regulate gene expression post-transcriptionally via antisense base-pairing. Although miRNAs are involved in a variety of important biological...
Ow, Maria C., Martinez, Natalia J., Olsen, Philip H., Silverman, Howard S., Barrasa, M. Inmaculada, Conradt, Barbara, ...
MicroRNAs (miRNAs) are small noncoding RNAs that regulate gene expression post-transcriptionally via antisense base-pairing. Although miRNAs are involved in a variety of important biological...
Martinez, Natalia J., Ow, Maria C., Barrasa, M. Inmaculada, Hammell, Molly, Sequerra, Reynaldo, Doucette-Stamm, Lynn, ...
MicroRNAs (miRNAs) and transcription factors (TFs) are primary metazoan gene regulators. Whereas much attention has focused on finding the targets of both miRNAs and TFs, the transcriptional networks...
Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity (2008)
Martinez, Natalia J., Ow, Maria C., Reece-Hoyes, John S., Barrasa, M. Inmaculada, Ambros, Victor R., Walhout, Albertha J.M.
The Caenorhabditis elegans genome encodes more than 100 microRNAs (miRNAs). Genetic analyses of miRNA deletion mutants have only provided limited insights into miRNA function. To gain insight into...
Vermeirssen, Vanessa, Barrasa, M. Inmaculada, Hidalgo, César A., Babon, Jenny Aurielle B., Sequerra, Reynaldo, Doucette-Stamm, Lynn, ...
Transcription regulatory networks play a pivotal role in the development, function, and pathology of metazoan organisms. Such networks are comprised of protein–DNA interactions between...
Vermeirssen, Vanessa, Deplancke, Bart, Barrasa, M. Inmaculada, Reece-Hoyes, John S., Arda, H. Efsun, Grove, Christian A., ...
Yeast one-hybrid (Y1H) assays provide a gene-centered method for the identification of interactions between gene promoters and regulatory transcription factors (TFs). To date, Y1H assays have...
Vermeirssen, Vanessa, Deplancke, Bart, Barrasa, M. Inmaculada, Reece-Hoyes, John S., Arda, H. Efsun, Grove, Christian A., ...
Yeast one-hybrid (Y1H) assays provide a gene-centered method for the identification of interactions between gene promoters and regulatory transcription factors (TFs). To date, Y1H assays have...
Vermeirssen, Vanessa, Barrasa, M. Inmaculada, Hidalgo, Cesar A., Babon, Jenny Aurielle B., Sequerra, Reynaldo, Doucette-Stamm, Lynn, ...
Transcription regulatory networks play a pivotal role in the development, function, and pathology of metazoan organisms. Such networks are comprised of protein-DNA interactions between transcription...
Barrasa, M. Inmaculada, Vaglio, Philippe, Cavasino, Fabien, Jacotot, Laurent, Walhout, Albertha J. M.
BACKGROUND: Transcription regulatory networks are composed of protein-DNA interactions between transcription factors and their target genes. A long-term goal in genome biology is to map protein-DNA...
Barrasa, M Inmaculada, Vaglio, Philippe, Cavasino, Fabien, Jacotot, Laurent, Walhout, Albertha JM
Abstract Background Transcription regulatory networks are composed of protein-DNA interactions between transcription factors and their target genes. A long-term goal in genome biology is to map...
M Inmaculada Barrasa, Fabien Cavasino, Laurent Jacotot, Albertha Jm Walhout
analysis of C. elegans differential gene expression
Computational identification of regulatory factors involved in microRNA transcription (2005)
Praveen Sethupathy, Molly Megraw, M. Inmaculada Barrasa, Artemis G. Hatzigeorgiou
Abstract. MicroRNAs (miRNAs) are non-coding RNA molecules that bind to and translationally repress mRNA transcripts. Currently ~1345 miRNAs have been identified in at least twelve species through...
Apoptosis and Regeneration of Hepatocytes during Recovery from Transient Hepadnavirus Infections
Guo, Ju-Tao, Zhou, Huan, Liu, Chen, Aldrich, Carol, Saputelli, Jeffrey, Whitaker, Tony, ...
It is well known that hepatitis B virus infections can be transient or chronic, but the basis for this dichotomy is not known. To gain insight into the mechanism responsible for the clearance of...
Barrasa, M. Inmaculada, Guo, Ju-Tao, Saputelli, Jeffrey, Mason, William S., Seeger, Christoph
Hepadnaviruses are enveloped viruses, each with a DNA genome packaged in an icosahedral nucleocapsid, which is the site of viral DNA synthesis. In the presence of envelope proteins, DNA-containing...
Conditional Replication of Duck Hepatitis B Virus in Hepatoma Cells
Guo, Ju-Tao, Pryce, Melissa, Wang, Xingtai, Barrasa, M. Inmaculada, Hu, Jianming, Seeger, Christoph
To facilitate investigations of replication and host cell interactions in the hepadnavirus system, we have developed cell lines permitting the conditional replication of duck hepatitis B virus...
Barrasa, M. Inmaculada, Harel, Noam, Yu, Yongjun, Alwine, James C.
The 86-kDa major immediate-early protein, IEP86 (IE2, IE2579aa, or ppUL122a), from the Towne and AD169 strains of human cytomegalovirus show four amino acid variations, namely, R68Q, K455E, T541A,...
Barrasa, M. Inmaculada, Harel, Noam Y., Alwine, James C.
The 86-kDa major immediate-early protein (IE2/IEP86) of human cytomegalovirus (HCMV) contains a serine-rich region (amino acids 258 to 275) with several consensus casein kinase II (CKII) sites. We...
Apoptosis and Regeneration of Hepatocytes during Recovery from Transient Hepadnavirus Infections
Guo, Ju-Tao, Zhou, Huan, Liu, Chen, Aldrich, Carol, Saputelli, Jeffrey, Whitaker, Tony, ...
It is well known that hepatitis B virus infections can be transient or chronic, but the basis for this dichotomy is not known. To gain insight into the mechanism responsible for the clearance of...
Barrasa, M. Inmaculada, Guo, Ju-Tao, Saputelli, Jeffrey, Mason, William S., Seeger, Christoph
Hepadnaviruses are enveloped viruses, each with a DNA genome packaged in an icosahedral nucleocapsid, which is the site of viral DNA synthesis. In the presence of envelope proteins, DNA-containing...
Conditional Replication of Duck Hepatitis B Virus in Hepatoma Cells
Guo, Ju-Tao, Pryce, Melissa, Wang, Xingtai, Barrasa, M. Inmaculada, Hu, Jianming, Seeger, Christoph
To facilitate investigations of replication and host cell interactions in the hepadnavirus system, we have developed cell lines permitting the conditional replication of duck hepatitis B virus...
Barrasa, M. Inmaculada, Harel, Noam, Yu, Yongjun, Alwine, James C.
The 86-kDa major immediate-early protein, IEP86 (IE2, IE2579aa, or ppUL122a), from the Towne and AD169 strains of human cytomegalovirus show four amino acid variations, namely, R68Q, K455E, T541A,...
Barrasa, M. Inmaculada, Harel, Noam Y., Alwine, James C.
The 86-kDa major immediate-early protein (IE2/IEP86) of human cytomegalovirus (HCMV) contains a serine-rich region (amino acids 258 to 275) with several consensus casein kinase II (CKII) sites. We...
Vermeirssen, Vanessa, Barrasa, M. Inmaculada, Hidalgo, César A., Babon, Jenny Aurielle B., Sequerra, Reynaldo, Doucette-Stamm, Lynn, ...
Transcription regulatory networks play a pivotal role in the development, function, and pathology of metazoan organisms. Such networks are comprised of protein–DNA interactions between...
Martinez, Natalia J., Ow, Maria C., Barrasa, M. Inmaculada, Hammell, Molly, Sequerra, Reynaldo, Doucette-Stamm, Lynn, ...
MicroRNAs (miRNAs) and transcription factors (TFs) are primary metazoan gene regulators. Whereas much attention has focused on finding the targets of both miRNAs and TFs, the transcriptional networks...
Ow, Maria C., Martinez, Natalia J., Olsen, Philip H., Silverman, Howard S., Barrasa, M. Inmaculada, Conradt, Barbara, ...
MicroRNAs (miRNAs) are small noncoding RNAs that regulate gene expression post-transcriptionally via antisense base-pairing. Although miRNAs are involved in a variety of important biological...
Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity
Martinez, Natalia J., Ow, Maria C., Reece-Hoyes, John S., Barrasa, M. Inmaculada, Ambros, Victor R., Walhout, Albertha J.M.
The Caenorhabditis elegans genome encodes more than 100 microRNAs (miRNAs). Genetic analyses of miRNA deletion mutants have only provided limited insights into miRNA function. To gain insight into...
Reece-Hoyes, John S., Deplancke, Bart, Barrasa, M. Inmaculada, Hatzold, Julia, Smit, Ryan B., Arda, H. Efsun, ...
Snail-type transcription factors (TFs) are found in numerous metazoan organisms and function in a plethora of cellular and developmental processes including mesoderm and neuronal development,...