Mark Stoneking

Boundaries and clines in the West Eurasian Y-chromosome landscape: Insights from the European part of Russia (2008)

Fechner, Angela, Quinque, Dominique, Rychkov, Sergey, Morozowa, Irina, Naumova, Oksana, Schneider, Yurij, ...

High fractions of exogenous DNA in human buccal samples reduce the quality of large-scale genotyping (2008)

Herráez, David López, Stoneking, Mark

Worldwide population differentiation at disease-associated SNPs (2008)

Myles, Sean, Davison, Dan, Barrett, Jeffrey, Stoneking, Mark, Timpson, Nic

Dynamic nature of the proximal AZFc region of the human Y chromosome: multiple independent deletion and duplication events revealed by microsatellite analysis (2008)

Balaresque, Patricia, Bowden, Georgina R., Parkin, Emma J., Omran, Gadha A., Heyer, Evelyne, Quintana-Murci, Lluis, ...

A Historical Appraisal of Clicks: A Linguistic and Genetic Population Perspective (2008)

Güldemann, Tom, Stoneking, Mark

Close genetic relationship between semitic-speaking and indo-european-speaking groups in iran (2008)

Nasidze, Ivan, Quinque, Dominique, Rahmani, M., Alemohamad, S. A., Stoneking, Mark

Positive selection in East Asians for an EDAR allele that enhances NF-kappaB activation (2008)

Bryk, Jarosław, Hardouin, Emilie, Pugach, Irina, Hughes, David, Strotmann, Rainer, Stoneking, Mark, ...

Mitochondrial Genome: Evolution (2008)

The Impact of the Austronesian Expansion: Evidence from mtDNA and Y Chromosome Diversity in the Admiralty Islands of Melanesia (2008)

Kayser, Manfred, Choi, Ying, Van Oven, Mannis, Mona, Stefano, Brauer, Silke, Trent, Ronald J., ...

The genetic ancestry of Polynesians can be traced to both Asia and Melanesia, which presumably reflects admixture occurring between incoming Austronesians and resident non-Austronesians in Melanesia...

Parallel selection on TRPV6 in human populations (2008)

Tang, Kun, Strotmann, Rainer, Schöneberg, Torsten, Prenen, Jean, ...

We identified and examined a candidate gene for local directional selection in Europeans, TRPV6, and conclude that selection has acted on standing genetic variation at this locus, creating parallel...

A New Approach for Using Genome Scans to Detect Recent Positive Selection in the Human Genome (2007)

Kun Tang, Kevin R. Thornton, Mark Stoneking

Genome-wide scanning for signals of recent positive selection is essential for a comprehensive and systematic understanding of human adaptation. Here, we present a genomic survey of recent local...

Microsatellite polymorphism within pfcrtprovides evidence of continuing evolution of chloroquine-resistant alleles in Papua New Guinea (2007)

DaRe, Jeana T, Mehlotra, Rajeev K, Michon, Pascal, Mueller, Ivo, Reeder, John, Sharma, Yagya D, ...

Abstract Background Polymorphism in the pfcrt gene underlies Plasmodium falciparum chloroquine resistance (CQR), as sensitive strains consistently carry lysine (K), while CQR strains carry threonine...

Identifying genes underlying skin pigmentation differences among human populations (2007)

Myles, Sean, Somel, Mehmet, Tang, Kun, Kelso, Janet, Stoneking, Mark

Identification of a candidate genetic variant for the high prevalence of type II diabetes in Polynesians (2007)

Myles, Sean, Hradetzky, Eva, Engelken, Johannes, Lao, Oskar, Nürnberg, Peter, Trent, Ronald J., ...

The Art of Reading Sequence Electropherograms : reply to Parson (2007)

Stoneking, Mark, Nasidze, Ivan

In search of polymorphic alu insertions with restricted geographic distributions (2007)

Cordaux, Richard, Srikanta, Deepa, Lee, Jungnam, Stoneking, Mark, Batzer, Mark A.

The Gagauz, a Linguistic Enclave, are not a Genetic Isolate (2007)

Nasidze, Ivan, Quinque, Dominique, Udina, Irina, Kunizheva, Svetlana, Stoneking, Mark

A preliminary analysis of the DNA and diet of the extinct Beothuk: A systematic approach to ancient human DNA (2007)

Kuch, Melanie, Gröcke, Darren R., Knyf, Martin C., Gilbert, M. Thomas P., Younghusband, Ban, Young, Terry, ...

Mating patterns amongst Siberian reindeer herders: Inferences from mtDNA and Y-chromosomal analyses (2007)

Pakendorf, Brigitte, Novgorodov, Innokentij N., Osakovskij, Vladimir L., Stoneking, Mark

A New Approach for Using Genome Scans to Detect Recent Positive Selection in the Human Genome (2007)

Tang, Kun, Thornton, Kevin R., Stoneking, Mark

A counter-clockwise northern route of the Y-chromosome haplogroup N from Southeast Asia towards Europe (2007)

Rootsi, Siiri, Zhivotovsky, Lev A., Baldovic, Marian, Kayser, Manfred, Kutuev, Ildus A., Khusainova, Rita, ...

Genetic Evidence Concerning Modern Human Origins (2007)

Y-chromosomal STR haplotypes in Kalmyk population samples (2007)

Roewer, Lutz, Krüger, Carmen, Willuweit, Sascha, Nagy, Marion, Rodig, Heike, Kokshunova, Lyudmila, ...

A Melanocortin 1 Receptor Allele Suggests Varying Pigmentation Among Neanderthals (2007)

Lalueza-Fox, Carles, Römpler, Holger, Caramelli, David, Stäubert, Claudia, Catalano, Giulio, Hughes, David, ...

Genealogical markers: mtDNA and the Y-chromosome (2007)

Stoneking, Mark, Kayser, M.

Close Genetic Relationship Between Semitic-speaking and Indo-European-speaking Groups in Iran (2007)

Nasidze, Ivan, Quinque, Dominique, Rahmani, M., Alemohamad, S. A., Stoneking, Mark

Microsatellite polymorphism within pfcrt provides evidence of continuing evolution of chloroquine-resistant alleles in Papua New Guinea (2007)

DaRe, Jeana T., Mehlotra, Rajeev K., Michon, Pascal, Mueller, Ivo, Reeder, John, Sharma, Yagya D., ...

Microsatellite polymorphism within pfcrt provides evidence of continuing evolution of chloroquine-resistant alleles in Papua New Guinea. (2007)

DaRe, Jeana T, Mehlotra, Rajeev K, Michon, Pascal, Mueller, Ivo, Reeder, John, Sharma, Yagya D, ...

BACKGROUND: Polymorphism in the pfcrt gene underlies Plasmodium falciparum chloroquine resistance (CQR), as sensitive strains consistently carry lysine (K), while CQR strains carry threonine (T) at...

Dual origins of the Japanese : common ground for hunter-gatherer and farmer Y chromosomes (2006)

Hammer, M. F., Karafet, H., Park, H., Omoto, K., Harihara, S., Stoneking, Mark, ...

Mother tongue : Concomitant replacement of language and mtDNA in South Caspian populations of Iran (2006)

The Gagauz, a linguistic enclave, are not a genetic isolate (2006)

Nasidze, Ivan, Quinque, Dominique, Udina, I., Kunizheva, S., Stoneking, Mark

Concomitant replacement of language and mtDNA in South Caspian populations of Iran (2006)

Nasidze, Ivan, Quinque, Dominique, Rahmani, M., Alemohamad, S. A., Stoneking, Mark

Evaluation of saliva as a source of human DNA for population and association studies (2006)

Quinque, Dominique, Kittler, Ralf, Kayser, Manfred, Stoneking, Mark, Nasidze, Ivan

Genetic evidence for our recent African ancestry (2006)

Investigating the health of our ancestors : insights from the evolutionary genetic consequences of prehistoric diseases (2006)

The patient is not dead yet : premature autopsy of an mtDNA data set (2006)

Stoneking, Mark, Nasidze, Ivan

Melanesian and Asian Origins of Polynesians : mtDNA and Y-Chromosome Gradients Across the Pacific (2006)

Kayser, Manfred, Brauer, Silke, Cordaux, Richard, Casto, Amanda, Lao, Oscar, Zhivotovsky, Lev A., ...

Investigating the effects of prehistoric migrations in Siberia: genetic variation and the origins of Yakuts (2006)

Pakendorf, Brigitte, Novgorodov, I. N., Osakovskij, V. L., Danilova, A. P., Protod´jakonov, A.P., Stoneking, Mark

Paleoparasite populations from archived sera: Insights into chloroquine drug resistance in Papua New Guinea - Reply to Chan et al. (2006)

Mehlotra, R. K., Stoneking, Mark, Zimmerman, P. A.

Identifying genes underlying skin pigmentation differences among human populations (2006)

Myles, Sean, Somel, Mehmet, Tang, Kun, Kelso, Janet, Stoneking, Mark

Melanesian and Asian Origins of Polynesians: mtDNA and Y Chromosome Gradients Across the Pacific (2006)

Kayser, Manfred, Brauer, Silke, Cordaux, Richard, Casto, Amanda, Lao, Oscar, Zhivotovsky, Lev A., ...

The human settlement of the Pacific Islands represents one of the most recent major migration events of mankind. Polynesians originated in Asia according to linguistic evidence or in Melanesia...

Melanesian and Asian Origins of Polynesians: mtDNA and Y-chromosome Gradients Across the Pacific (2006)

Kayser, Manfred, Brauer, Silke, Cordaux, Richard, Casto, Amanda, Lao, Oscar, Zhivotovsky, Lev A., ...

The human settlement of the Pacific Islands represents one of the most recent major migration events of mankind. Polynesians originated in Asia according to linguistic evidence or in Melanesia...

Authors' Reply (2005)

Mark Stoneking, Brigitte Pakendorf, Hiroki Oota

Authors' Reply (2005)

Mark Stoneking, Brigitte Pakendorf, Hiroki Oota

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Recent Origin and Cultural Reversion of a Hunter–Gatherer Group (2005)

Hiroki Oota, Brigitte Pakendorf, Gunter Weiss, Arndt Von Haeseler, Surin Pookajorn, Wannapa Settheetham-Ishida, ...

Genes, language and culture reveal that the Mlabri reverted from an agricultural to a hunter-gatherer lifestyle, suggesting that hunter-gatherer groups might not always represent the pre-...

Recent Origin and Cultural Reversion of a Hunter–Gatherer Group (2005)

Hiroki Oota, Brigitte Pakendorf, Gunter Weiss, Arndt Von Haeseler, Surin Pookajorn, Wannapa Settheetham-Ishida, ...

Contemporary hunter–gatherer groups are often thought to serve as models of an ancient lifestyle that was typical of human populations prior to the development of agriculture. Patterns of genetic...

Recent Origin and Cultural Reversion of a Hunter–Gatherer Group (2005)

Oota, Hiroki, Pakendorf, Brigitte, Weiss, Gunter, Von Haeseler, Arndt, Pookajorn, Surin, Settheetham-Ishida, Wannapa, ...

Contemporary hunter–gatherer groups are often thought to serve as models of an ancient lifestyle that was typical of human populations prior to the development of agriculture. Patterns of genetic...

Authors' reply (2005)

Stoneking, Mark, Pakendorf, Brigitte, Oota, Hiroki

Mitochondrial DNA and human evolution (2005)

Pakendorf, Brigitte, Stoneking, Mark

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, G., Stoneking, Mark, Excoffier, L.

Genetic evidence for the Mongolian ancestry of Kalmyks (2005)

Nasidze, Ivan, Quinque, Dominique, Dupanloup, I., Cordaux, Richard, Kokshunova, L., Stoneking, Mark

Insight into the early spread of chloroquine resistant Plasmodium falciparum infections in Papua New Guinea (2005)

Mehlotra, R. K., Mattera, G., Bhatia, K., Reeder, J. C., Stoneking, Mark, Zimmerman, P. A.

MtDNA and Y-chromosome variation in Kurdish groups (2005)

Nasidze, Ivan, Quinque, Dominique, Ozturk, M., Bendukidze, N., Stoneking, Mark

In order to investigate the origins and relationships of Kurdish-speaking groups, mtDNA HV1 sequences, eleven Y chromosome bi-allelic markers, and 9 Y-STR loci were analyzed among three Kurdish...

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Gene, Geographie und Sprache (2005)

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations (2005)

Hamilton, Grant S., Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Independent origins of Indian caste and tribal paternal lineages (2004)

Cordaux, Richard, Aunger, R., Bentley, G., Nasidze, Ivan, Sirajuddin, S. M., Stoneking, Mark

Y-STR haplotypes from eight south Indian groups based on five loci (2004)

Cordaux, Richard, Bentley, G., Aunger, R., Sirajuddin, S. M., Stoneking, Mark

The northeast Indian passageway: a barrier or corridor for human migrations? (2004)

Cordaux, Richard, Weiss, Gunther, Saha, N., Stoneking, Mark

Genetic evidence for the demic diffusion of agriculture to India (2004)

Cordaux, Richard, Edwin, D., Vishwanathan, H., Stoneking, Mark

Development of Y-chromosomal microsatellite markers for non-human primates (2004)

Erler, Axel, Stoneking, Mark, Kayser, Manfred

Quick guide: humans (2004)

Hughes, David A., Cordaux, Richard, Stoneking, Mark

Y chromosome and mitochondrial DNA variation in Lithuanians (2004)

Kasperaviciute, D., Kucinskas, V., Stoneking, Mark

A comprehensive survey of human Y-chromosomal microsatellites (2004)

Kayser, Manfred, Kittler, Ralf, Erler, Axel, Hedman, M., Lee, A. C., Mohyuddin, A., ...

Mitochondrial DNA and Y-chromosome variation in the Caucasus (2004)

Nasidze, Ivan, Ling, E. Y., Quinque, D., Dupanloup, I., Cordaux, Richard, Rychkov, S., ...

Genetic evidence concerning the origins of South and North Ossetians (2004)

Nasidze, Ivan, Quinque, D., Dupanloup, I., Rychkov, S., Naumova, O., Zhukova, O., ...

Genetic structure and affinities among tribal populations of southern India: a study of 24 autosomal DNA markers (2004)

Vishwanathan, H., Deepa, E., Cordaux, Richard, Stoneking, Mark, Usha Rani, M. V., Majumder, P. P.

A Comprehensive Survey of Human Y-Chromosomal Microsatellites (2004)

Kayser, Manfred, Kittler, Ralf, Erler, Axel, Hedman, Minttu, Lee, Andrew C., Mohyuddin, Aisha, ...

This is the version as printed in the American Journal of Human Genetics by the University of Chicago Press. Their website is http://www.journals.uchicago.edu/AJHG/home.html

The Northeast Indian Passageway: A Barrier or Corridor for Human Migrations? (2004)

Cordaux, Richard, Weiss, Gunter, Saha, Nilmani, Stoneking, Mark

The northeast Indian passageway connecting the Indian subcontinent to east/southeast Asia is thought to have been a major corridor for human migrations. Because it is also an important linguistic...

The Northeast Indian Passageway: A Barrier or Corridor for Human Migrations? (2004)

Cordaux, Richard, Weiss, Gunter, Saha, Nilmani, Stoneking, Mark

The northeast Indian passageway connecting the Indian subcontinent to East/Southeast Asia is thought to have been a major corridor for human migrations. Because it is also an important linguistic...

The Northeast Indian Passageway: A Barrier or Corridor for Human Migrations? (2004)

Cordaux, Richard, Weiss, Gunter, Saha, Nilmani, Stoneking, Mark

The northeast Indian passageway connecting the Indian subcontinent to east/southeast Asia is thought to have been a major corridor for human migrations. Because it is also an important linguistic...

Reduced Y-chromosome, but not mitochondrial DNA, diversity in human populations from West New Guinea (2003)

Kayser, Manfred, Brauer, Silke, Weiss, Gunter, Schiefenhovel, W., Underhill, P., Shen, P. D., ...

South Asia : the Andamanese and the genetic evidence for an "early" human dispersal out of Africa (2003)

Cordaux, Richard, Stoneking, Mark

Mitochondrial DNA analysis reveals diverse histories of tribal populations of India (2003)

Cordaux, Richard, Saha, N., Bentley, G. R., Aunger, A., Sirajuddin, S. M., Stoneking, Mark

A genome scan to detect candidate regions influenced by local natural selection in human populations (2003)

Y-chromosome STR haplotypes and the genetic structure of U.S. populations of African, European, and Hispanic ancestry (2003)

Kayser, Manfred, Brauer, Silke, Schädlich, H., Prinz, M., Batzer, M. A., Zimmermann, P. A., ...

Apparent intra-chromosomal exchange on the human Y chromosome explained by population history (2003)

Kittler, Ralf, Erler, Axel, Brauer, Silke, Stoneking, Mark, Kayser, Manfred

Testing hypotheses of language replacement in the Caucasus : evidence from the Y-chromosome (2003)

Nasidze, Ivan, Sarkisian, T., Kerimov, A., Stoneking, Mark

Mitochondrial DNA evidence for admixed origins of central Siberian populations (2003)

Pakendorf, Brigitte, Wiebe, Victor, Tarskaia, L. A., Spitsyn, V. A., Soodyall, H., Rodewald, A., ...

Molecular evolution of Pediculus humanus and the origin of clothing (2003)

Kittler, Ralf, Kayser, Manfred, Stoneking, Mark

Widespread prehistoric human cannibalism: easier to swallow? (2003)

Mitochondrial Genome : Evolution (2003)

Haplotypes from the Caucasus, Turkey and Iran for nine Y-STR loci (2003)

Nasidze, Ivan, Schädlich, Hiltrud, Stoneking, Mark

Y chromosome STR haplotypes and the genetic structure of U.S. populations of African, European, and Hispanic ancestry. (2003)

Kayser, Manfred, Brauer, Silke, Sch Dlich, Hiltrud, Prinz, Mechthild, Batzer, Mark A., Zimmerman, Peter A., ...

To investigate geographic structure within U.S. ethnic populations, we analyzed 1705 haplotypes on the basis of 9 short tandem repeat (STR) loci on the Y-chromosome from 9-11 groups each of...

A Genome Scan to Detect Candidate Regions Influenced by Local Natural Selection in Human Populations (2003)

A Genome Scan to Detect Candidate Regions Influenced by Local Natural Selection in Human Populations (2003)

As human populations dispersed throughout the world, they were subjected to new selective forces, which must have led to local adaptation via natural selection and hence altered patterns of genetic...

Y Chromosome STR Haplotypes and the Genetic Structure of U.S. Populations of African, European, and Hispanic Ancestry (2003)

As human populations dispersed throughout the world, they were subjected to new selective forces, which must have led to local adaptation via natural selection and hence altered patterns of genetic...

Kayser, Manfred, Brauer, Silke, Schädlich, Hiltrud, Prinz, Mechthild, Batzer, Mark A., Zimmerman, Peter A., ...

To investigate geographic structure within U.S. ethnic populations, we analyzed 1705 haplotypes on the basis of 9 short tandem repeat (STR) loci on the Y-chromosome from 9–11 groups each of...

A Genome Scan to Detect Candidate Regions Influenced by Local Natural Selection in Human Populations (2003)

Online Y-chromosomal short tandem repeat haplotype reference database (YHRD) for US populations (2002)

As human populations dispersed throughout the world, they were subjected to new selective forces, which must have led to local adaptation via natural selection and hence altered patterns of genetic...

Kayser, Manfred, Brauer, Silke, Willuweit, S., Schadlich, H., Batzer, M. A., Zawacki, J., ...

We describe here an online Y-chromosomal short tandem repeat haplotype reference database (YHRD) for U.S. populations, which represents 9-locus Y-STR haplotypes for 1705 African-Americans....

Extreme mtDNA homogeneity in continental Asian populations (2002)

Oota, Hiroshi, Kitano, T., Jin, F., Yuasa, I., Wang, L., Ueda, S., ...

Mitochondrial DNA (mtDNA) variation in continental Asia has not been well-studied. Here, we report mtDNA HV1 sequences for 84 Xi'an and 82 Changsha Han Chinese, 89 Honshu Japanese, and 35 Vietnamese....

Y-chromosomal evidence for a strong reduction in male population size of Yakuts (2002)

Pakendorf, Brigitte, Morar, B., Tarskaia, L. A., Kayser, Manfred, Soodyall, H., Rodewald, A., ...

Patterns of human diversity, within and among continents, inferred from biallelic DNA polymorphisms (2002)

Romualdi, C., Balding, D., Nasidze, Ivan, Risch, G., Robichaux, M., Sherry, S. T., ...

Previous studies have reported that about 85% of human diversity at Short Tandem Repeat (STR) and Restriction Fragment Length Polymorphism (RFLP) autosomal loci is due to differences between...

A whole genome amplification method to generate long fragments from low quantities of genomic DNA (2002)

Kittler, Ralf, Stoneking, Mark, Kayser, Manfred

Several whole genome amplification strategies have been developed to preamplify the entire genome from minimal amounts of DNA for subsequent molecular genetic analysis. However, none of these...

Genetic variation among human populations from the Caucasus (2002)

Genetic variability and linkage disequilibrium within the DP region: analysis of 15 different populations. (2001)

Begovich, A. B., Moonsamy, P. V., Mack, S. J., Barcellos, L. F., Steiner, L. L., Grams, S., ...

Human mtDNA and Y-chromosome variation is correlated with matrilocal vs. patrilocal residence. (2001)

Oota, Hiroshi, Settheetham-Ishida, W., Tiwawech, D., Ishida, T., Stoneking, Mark

Phylogenetic analysis of the Friedreich ataxia GAA trinucleotide repeat. (2001)

Justice, C. M., Den, Z., Nguyen, S. V., Stoneking, Mark, Deininger, P. L., Batzer, M. A., ...

Independent histories of human Y chromosomes from Melanesia and Australia. (2001)

Kayser, Manfred, Brauer, Silke, Weiss, Gunter, Schiefenhövel, W., Underhill, P. A., Stoneking, Mark

Diversity and heterogeneity in mitochondrial DNA of North American populations. (2001)

Melton, T., Clifford, S., Kayser, Manfred, Nasidze, Ivan, Batzer, M., Stoneking, Mark

Mitochondrial DNA variation and language replacements in the Caucasus. (2001)

Alu insertion polymorphisms and the genetic structure of human populations from the Caucasus. (2001)

Nasidze, Ivan, Risch, G. M., Robichaux, M., Sherry, S. T., Batzer, M. A., Stoneking, Mark

Mitochondrial DNA analysis of the presumptive remains of Jesse James. (2001)

Stone, A. C., Starrs, J. E., Stoneking, Mark

Single nucleotide polymorphisms: from the evolutionary past. (2001)

Alu insertion polymorphisms in humans: a review. (2001)

Donnelly, P., Foley, R., Stoneking, Mark, Deininger, P. L., Batzer, M. A.

Haplotype diversity and linkage disequilibrium at human G 6 PD recent origin of alleles that confer malarial resistance. (2001)

Tishkoff, S. A., Varkonyi, R., Cahinhinan, N., Abbes, S., Argyropoulos, G., Destro-Bisol, G., ...

The 9-bp deletion between the mitochondrial lysine tRNA and COII genes in tribal populations of India. (2000)

Clark, V. J., Sivendren, S., Saha, N., Bentley, G. R., Aunger, R., Sirajuddin, S. M., ...

Characteristics and frequency of germline mutations at microsatellite loci from the human Y chromosome revealed by direct observation in father/son pairs. (2000)

Kayser, Manfred, Roewer, L., Hedman, M., Henke, L., Henke, J., Brauer, Silke, ...

Mitochondrial DNA sequences in prehistoric human remains from the Alps. (2000)

Di Benedetto, G., Nasidze, Ivan, Stenico, M., Nigro, L., Krings, M., Lanzinger, M., ...

HLA-DQ haplotypes in 15 different populations. (2000)

Kasahara, M., Begovich., A. B., Klitz, W., Steiner, L. L., Grams, S., Suraj-Baker, V., ...

Alu insertion polymorphisms in Northwest Africa and the Iberian Peninsula: evidence for a strong genetic boundary through the Gibraltar Straits. (2000)

Comas, D., Calafell, F., Benchemsi, N., Helal, A., Lefranc, G., Stoneking, Mark, ...

Mitochondrial DNA sequences in prehistoric human remains from the Alps. (2000)

Di Benedetto, G., Nasidze, Ivan, Stenico, M., Nigro, L., Krings, M., Lanzinger, M., ...

Melanesian origin of Polynesian Y chromosomes. (2000)

Kayser, Manfred, Brauer, Silke, Weiss, G., Underhill, P. A., Roewer, L., Schiefenhövel, W., ...

Questioning evidence for recombination in human mitochondrial DNA. (2000)

Kumar, S., Hedrick, P. W., Dowling, T., Stoneking, Mark

Evolution of Pacific/Asian populations inferred from HLA class II allele frequency distributions. (2000)

Mack, S. J., Bugawan, T. L., Moonsamy, P. V., Erlich, J. A., Trachtenberg, E. A., Paik, Y. K., ...

Reading between the LINEs: human genomic variation induced by LINE-1 retrotransposition. (2000)

Sheen, F., Sherry, S. T., Risch, G. M., Robichaux, M., Nasidze, Ivan, Stoneking, Mark, ...

DNA and recent human evolution. (2000)

Aloisi, M., Stoneking, Mark

Hypervariable sites in the mtDNA control region are mutational hotspots. (2000)

Short tandem-repeat polymorphism/Alu haplotype variation at the PLAT locus: implications for modern human origins. (2000)

Tishkoff, S. A., Pakstis, A. J., Stoneking, Mark, Kidd, J. R., Destro-Bisol, G., Sajantila, A., ...

Reading between the LINEs: Human Genomic Variation Induced by LINE-1 Retrotransposition (2000)

Sheen, Fang-miin, Sherry, Stephen T., Risch, Gregory M., Robichaux, Myles, Nasidze, Ivane, Stoneking, Mark, ...

HLA class I allele distributions in six Pacific/Asian populations: evidence of selection at the HLA-A locus. (1999)

Bugawan, T. L., Mack, S. J., Stoneking, Mark, Saha, M., Beck, H. P., Erlich, H. A.

Peopling of Sahul: mitochondrial DNA variation in Australian aboriginal and Papua New Guinean populations. (1999)

Redd, A. J., Stoneking, Mark

Analysis of ancient DNA from a prehistoric Amerindian cemetery. (1999)

Stone, A. C., Stoneking, Mark

MtDNA Analysis of Nile River Valley Populations: A Genetic Corridor or aBarrier to Migration? (1999)

Krings, Matthias, Salem, Abd-el Halim, Bauer, Karin, Geisert, Helga, Malek, Adel K., Chaix, Louis, ...

Construction of Larger-Size Sequencing Templates from Degraded DNA (1999)

Sequential Loss of Two Neighboring Exons of the Tropoelastin Gene During Primate Evolution (1999)

Szabó, Zoltán, Levi-Minzi, Simona A., Christiano, Angela M., Struminger, Carole, Stoneking, Mark, Batzer, Mark A., ...

Mitochondrial mutation rate revisited: hot spots and polymorphism (1998)

Jazin, Elena, Soodyall, Himla, Jalonen, Paula, Lindholm, Eva, Stoneking, Mark, Gyllenstein, Ulf

Genetic evidence for the proto-Austronesian homeland in Asia: mtDNA and nuclear DNA variation in Taiwanese aboriginal tribes (1998)

Melton, T., Clifford, S., Martinson, J., Batzer, M., Stoneking, Mark

mtDNA analysis of a prehistoric Oneota population: implications for the peopling of the New World (1998)

Stone, A. C., Stoneking, Mark

Polymorphic Alu insertions and the Asian origin of native American populations (1998)

Novick, Gabriele E., Novick, Corina C., Yunis, Juan, Yunis, Emilio, Mayolo, Pamela A., Scheer, W. Douglas, ...

Women on the move (1998)

Genetic Structure of the Ancestral Population of Modern Humans (1998)

Zietkiewicz, Ewa, Yotova, Vania, Jarnik, Michal, Korab-Laskowska, Maria, Kidd, Kenneth K., Modiano, David, ...

Interethnic polymorphism of EWS intron 6: genome plasticity mediated by Alu retroposition and recombination (1997)

Zucman-Rossi, Jessica, Batzer, Mark A., Stoneking, Mark, Delattre, Oliver, Thomas, Gilles

Response: Alu repeats and human evolution (1997)

Batzer, Mark A., Sherry, Stephen T., Deininger, Prescott L., Stoneking, Mark

Extent of heterogeneity in mitochondrial DNA of sub-Saharan African populations (1997)

Melton, T., Ginther, C., Sensabaugh, G., Soodyall, G., Stoneking, Mark

Extent of heterogeneity in mitochondrial DNA of European populations (1997)

Melton, T., Wilson, M., Batzer, M., Stoneking, Mark

Alu Evolution in Human Populations: Using the Coalescent to Estimate Effective Population Size (1997)

Sherry, S. T., Harpending, H. C., Batzer, M. A., Stoneking, Mark

The founding mitochondrial DNA lineages of Tristan da Cunha Islanders (p 157-166) (1997)

Soodyall, Himla, Jenkis, Trefor, Mukherjee, Arindam, Du Toit, Ernette, Roberts, Derek F., Stoneking, Mark

Neandertal DNA Sequences and the Origin of Modern Humans (1997)

Krings, Matthias, Stone, Anne, Schmitz, Ralf W., Krainitzki, Heike, Stoneking, Mark, Pääbo, Svante

Recent African origin of human mitochondrial DNA: review of the evidence and current status of the hypothesis (1997)

The human genome project and molecular anthropology (1997)

AluInsertion Polymorphisms and Human Evolution: Evidence for a Larger Population Size in Africa (1997)

Stoneking, Mark, Fontius, Jennifer J., Clifford, Stephanie L., Soodyall, Himla, Arcot, Santosh S., Saha, Nilmani, ...

Alu Insertion Polymorphisms and Human Evolution: Evidence for a Larger Population Size in Africa (1997)

Stoneking, Mark, Fontius, Jennifer J., Clifford, Stephanie L., Soodyall, Himla, Arcot, Santosh S., Saha, Nilmani, ...

A Molecular basis for human hypersensitivity of aminoglyscoside antibiotics (1993)

Hutchin, Tim, Haworth, Lan, Higashi, Koichiro, Fischel-Ghodsian, Nathan, Stoneking, Mark, Saha, N., ...

We have investigated the distribution of mitochondrial DNA polymorphisms in a rare maternally transmitted genetic trait that causes hypersensitivity to aminoglycoside antibiotics, In the hope that a...

Geographic Origin of Human Mitochondrial DNA Revisited (1992)

Stoneking, Mark, Sherry, Stephen T., Vigilant, Linda

Ancestral Geographic States and the Peril of Parsimony (1991)

Wilson, Allan C., Stoneking, Mark, Cann, Rebecca L.

Conformational mutation in human mtDNA detected by direct sequencing of enzymatically amplified DNA (1988)

Vigilant, Linda, Stoneking, Mark, Wilson, Allan C.

Restriction enzyme analysis of 241 human mtDNAs revealed polymorphism in the electrophoretic mobility of a fragment corresponding to part of the ND4 gene. Enzymatic amplification and direct...

Length mutations in human mitochondrial DNA: direct sequencing of enzymatically amplified DNA (1987)

Wrischnik, Lisa A., Higuchi, Russell G., Stoneking, Mark, Erlich, Henry A., Arnheim, Norman, Wilson, Allan C.

A specific segment of mitochondrial DNA from 18 people was examined by two methods of direct DNA sequencing. This segment includes a small noncoding region (V) shown before by restriction analysis to...

Pseudolinkage of the duplicate loci for supernatant aspartate aminotransferase in brook trout, Salvelinus fontinalis (1980)

WRIGHT, JAMES E., MAY, BERNIE, STONEKING, MARK, LEE, GERALDINE M.

Linkage and other relations of the ptc-tasting and kell blood group system loci / (1977)

Stoneking, Mark.

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Patterns of Human Diversity, within and among Continents, Inferred from Biallelic DNA Polymorphisms

Romualdi, Chiara, Balding, David, Nasidze, Ivane S., Risch, Gregory, Robichaux, Myles, Sherry, Stephen T., ...

Previous studies have reported that about 85% of human diversity at Short Tandem Repeat (STR) and Restriction Fragment Length Polymorphism (RFLP) autosomal loci is due to differences between...

Alu Insertion Polymorphisms and Human Evolution: Evidence for a Larger Population Size in Africa

Stoneking, Mark, Fontius, Jennifer J., Clifford, Stephanie L., Soodyall, Himla, Arcot, Santosh S., Saha, Nilmani, ...

Alu insertion polymorphisms (polymorphisms consisting of the presence/absence of an Alu element at a particular chromosomal location) offer several advantages over other nuclear DNA polymorphisms for...

Reading between the LINEs: Human Genomic Variation Induced by LINE-1 Retrotransposition

Sheen, Fang-miin, Sherry, Stephen T., Risch, Gregory M., Robichaux, Myles, Nasidze, Ivane, Stoneking, Mark, ...

The insertion of mobile elements into the genome represents a new class of genetic markers for the study of human evolution. Long interspersed elements (LINEs) have amplified to a copy number of...

Y Chromosome STR Haplotypes and the Genetic Structure of U.S. Populations of African, European, and Hispanic Ancestry

Kayser, Manfred, Brauer, Silke, Schädlich, Hiltrud, Prinz, Mechthild, Batzer, Mark A., Zimmerman, Peter A., ...

To investigate geographic structure within U.S. ethnic populations, we analyzed 1705 haplotypes on the basis of 9 short tandem repeat (STR) loci on the Y-chromosome from 9–11 groups each of...

Recent Origin and Cultural Reversion of a Hunter–Gatherer Group

Oota, Hiroki, Pakendorf, Brigitte, Weiss, Gunter, Von Haeseler, Arndt, Pookajorn, Surin, Settheetham-Ishida, Wannapa, ...

Contemporary hunter–gatherer groups are often thought to serve as models of an ancient lifestyle that was typical of human populations prior to the development of agriculture. Patterns of genetic...

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations

Hamilton, Grant, Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

Authors' Reply

Stoneking, Mark, Pakendorf, Brigitte, Oota, Hiroki

Independent Histories of Human Y Chromosomes from Melanesia and Australia

Kayser, Manfred, Brauer, Silke, Weiss, Gunter, Schiefenhövel, Wulf, Underhill, Peter A., Stoneking, Mark

To investigate the origins and relationships of Australian and Melanesian populations, 611 males from 18 populations from Australia, Melanesia, and eastern/southeastern Asia were typed for eight...

Hypervariable Sites in the mtDNA Control Region Are Mutational Hotspots

Joint Segregation of Biochemical Loci in Salmonidae. II. Linkage Associations from a Hybridized Salvelinus Genome (S. NAMAYCUSHxS. FONTINALIS)

Hypervariable sites in human mtDNA are readily identified in evolutionary studies and are usually assumed to represent mutational hotspots. Recently, an alternative hypothesis was proposed that holds...

May, Bernie, Stoneking, Mark, Wright, James E.

The results of more than 300 pairwise examinations of biochemical loci for joint segregation in brook trout (Salvelinus fontinalis) and in the hybridized genome of lake trout (S. namaycush) x brook...

HLA-DQα allele and genotype frequencies in various human populations determined by using enzymatic amplification and oligonucleotide probes

Helmuth, Rhea, Fildes, Nicola, Blake, Edward, Luce, Michael C., Chimera, J., Madej, Roberta, ...

Allele and genotype frequencies at the HLA-DQα locus have been determined by the use of polymerase chain reaction (PCR) amplification and nonradioactive oligonucleotide probes. The probes define six...

Patterns of Human Diversity, within and among Continents, Inferred from Biallelic DNA Polymorphisms

Romualdi, Chiara, Balding, David, Nasidze, Ivane S., Risch, Gregory, Robichaux, Myles, Sherry, Stephen T., ...

Previous studies have reported that about 85% of human diversity at Short Tandem Repeat (STR) and Restriction Fragment Length Polymorphism (RFLP) autosomal loci is due to differences between...

Alu Insertion Polymorphisms and Human Evolution: Evidence for a Larger Population Size in Africa

Stoneking, Mark, Fontius, Jennifer J., Clifford, Stephanie L., Soodyall, Himla, Arcot, Santosh S., Saha, Nilmani, ...

Alu insertion polymorphisms (polymorphisms consisting of the presence/absence of an Alu element at a particular chromosomal location) offer several advantages over other nuclear DNA polymorphisms for...

Reading between the LINEs: Human Genomic Variation Induced by LINE-1 Retrotransposition

Sheen, Fang-miin, Sherry, Stephen T., Risch, Gregory M., Robichaux, Myles, Nasidze, Ivane, Stoneking, Mark, ...

The insertion of mobile elements into the genome represents a new class of genetic markers for the study of human evolution. Long interspersed elements (LINEs) have amplified to a copy number of...

Reduced Y-Chromosome, but Not Mitochondrial DNA, Diversity in Human Populations from West New Guinea

Kayser, Manfred, Brauer, Silke, Weiss, Gunter, Schiefenhövel, Wulf, Underhill, Peter, Shen, Peidong, ...

To investigate the paternal population history of New Guinea, 183 individuals from 11 regional populations of West New Guinea (WNG) and 131 individuals from Papua New Guinea (PNG) were analyzed at 26...

Y Chromosome STR Haplotypes and the Genetic Structure of U.S. Populations of African, European, and Hispanic Ancestry

Kayser, Manfred, Brauer, Silke, Schädlich, Hiltrud, Prinz, Mechthild, Batzer, Mark A., Zimmerman, Peter A., ...

To investigate geographic structure within U.S. ethnic populations, we analyzed 1705 haplotypes on the basis of 9 short tandem repeat (STR) loci on the Y-chromosome from 9–11 groups each of...

Recent Origin and Cultural Reversion of a Hunter–Gatherer Group

Oota, Hiroki, Pakendorf, Brigitte, Weiss, Gunter, Von Haeseler, Arndt, Pookajorn, Surin, Settheetham-Ishida, Wannapa, ...

Contemporary hunter–gatherer groups are often thought to serve as models of an ancient lifestyle that was typical of human populations prior to the development of agriculture. Patterns of genetic...

Molecular analysis reveals tighter social regulation of immigration in patrilocal populations than in matrilocal populations

Hamilton, Grant, Stoneking, Mark, Excoffier, Laurent

Human social organization can deeply affect levels of genetic diversity. This fact implies that genetic information can be used to study social structures, which is the basis of ethnogenetics....

South Asia, the Andamanese, and the Genetic Evidence for an “Early” Human Dispersal out of Africa

Cordaux, Richard, Stoneking, Mark

A Comprehensive Survey of Human Y-Chromosomal Microsatellites

Kayser, Manfred, Kittler, Ralf, Erler, Axel, Hedman, Minttu, Lee, Andrew C., Mohyuddin, Aisha, ...

We have screened the nearly complete DNA sequence of the human Y chromosome for microsatellites (short tandem repeats) that meet the criteria of having a repeat-unit size of ⩾3 and a repeat count...

Authors' Reply

Stoneking, Mark, Pakendorf, Brigitte, Oota, Hiroki

Joint Segregation of Biochemical Loci in Salmonidae. II. Linkage Associations from a Hybridized Salvelinus Genome (S. NAMAYCUSHxS. FONTINALIS)

May, Bernie, Stoneking, Mark, Wright, James E.

The results of more than 300 pairwise examinations of biochemical loci for joint segregation in brook trout (Salvelinus fontinalis) and in the hybridized genome of lake trout (S. namaycush) x brook...

Independent Histories of Human Y Chromosomes from Melanesia and Australia

Kayser, Manfred, Brauer, Silke, Weiss, Gunter, Schiefenhövel, Wulf, Underhill, Peter A., Stoneking, Mark

To investigate the origins and relationships of Australian and Melanesian populations, 611 males from 18 populations from Australia, Melanesia, and eastern/southeastern Asia were typed for eight...

Hypervariable Sites in the mtDNA Control Region Are Mutational Hotspots