Matthew R. Johnson

Intercellular Communication in Hyperthermophilic Microorganisms (2005)

Johnson, Matthew R

In the microbial world it is becoming apparent that many syntrophic, symbiotic and competitive interactions that occur within and between species are driven largely by a form of cell-to-cell...

Wake-stabilized diffusion flames in crossflow : application to the efficiencies of gas flares / (2001)

Johnson, Matthew R.

A thesis submitted to the Faculty of Graduate Studies and Research in partial fulfillment of the requirements for the degree of Doctor of Philosophy, Dept. of Mechanical Engineering, University of...

Michael Oakeshott's critique of modernity: Science, ideology, and reason (1999)

Johnson, Matthew R

Modernism, for Michael Oakeshott, is an intellectual movement that considers itself definitive of moral and political reasons for action. It is, in short, the "cult of man." The scientific approach...

Transcriptional Analysis of Biofilm Formation Processes in the Anaerobic, Hyperthermophilic Bacterium Thermotoga maritima

Pysz, Marybeth A., Conners, Shannon B., Montero, Clemente I., Shockley, Keith R., Johnson, Matthew R., Ward, Donald E., ...

Thermotoga maritima, a fermentative, anaerobic, hyperthermophilic bacterium, was found to attach to bioreactor glass walls, nylon mesh, and polycarbonate filters during chemostat cultivation on...

Genome-Wide Transcriptional Variation within and between Steady States for Continuous Growth of the Hyperthermophile Thermotoga Maritima

Shockley, Keith R., Scott, Kevin L., Pysz, Marybeth A., Conners, Shannon B., Johnson, Matthew R., Montero, Clemente I., ...

Maltose-limited, continuous growth of the hyperthermophile Thermotoga maritima at different temperatures and dilution rates (80°C/0.25 h−1, 80°C/0.17 h−1, and 85°C/0.25 h−1) showed that...

An Expression-Driven Approach to the Prediction of Carbohydrate Transport and Utilization Regulons in the Hyperthermophilic Bacterium Thermotoga maritima†

Conners, Shannon B., Montero, Clemente I., Comfort, Donald A., Shockley, Keith R., Johnson, Matthew R., Chhabra, Swapnil R., ...

Comprehensive analysis of genome-wide expression patterns during growth of the hyperthermophilic bacterium Thermotoga maritima on 14 monosaccharide and polysaccharide substrates was undertaken with...

Transcriptional and Biochemical Analysis of Starch Metabolism in the Hyperthermophilic Archaeon Pyrococcus furiosus

Lee, Han-Seung, Shockley, Keith R., Schut, Gerrit J., Conners, Shannon B., Montero, Clemente I., Johnson, Matthew R., ...

Pyrococcus furiosus utilizes starch and its degradation products, such as maltose, as primary carbon sources, but the pathways by which these α-glucans are processed have yet to be defined. For...

Transcriptional Analysis of Biofilm Formation Processes in the Anaerobic, Hyperthermophilic Bacterium Thermotoga maritima

Pysz, Marybeth A., Conners, Shannon B., Montero, Clemente I., Shockley, Keith R., Johnson, Matthew R., Ward, Donald E., ...

Thermotoga maritima, a fermentative, anaerobic, hyperthermophilic bacterium, was found to attach to bioreactor glass walls, nylon mesh, and polycarbonate filters during chemostat cultivation on...

Genome-Wide Transcriptional Variation within and between Steady States for Continuous Growth of the Hyperthermophile Thermotoga Maritima

Shockley, Keith R., Scott, Kevin L., Pysz, Marybeth A., Conners, Shannon B., Johnson, Matthew R., Montero, Clemente I., ...

Maltose-limited, continuous growth of the hyperthermophile Thermotoga maritima at different temperatures and dilution rates (80°C/0.25 h−1, 80°C/0.17 h−1, and 85°C/0.25 h−1) showed that...

An Expression-Driven Approach to the Prediction of Carbohydrate Transport and Utilization Regulons in the Hyperthermophilic Bacterium Thermotoga maritima†

Conners, Shannon B., Montero, Clemente I., Comfort, Donald A., Shockley, Keith R., Johnson, Matthew R., Chhabra, Swapnil R., ...

Comprehensive analysis of genome-wide expression patterns during growth of the hyperthermophilic bacterium Thermotoga maritima on 14 monosaccharide and polysaccharide substrates was undertaken with...

Transcriptional and Biochemical Analysis of Starch Metabolism in the Hyperthermophilic Archaeon Pyrococcus furiosus

Lee, Han-Seung, Shockley, Keith R., Schut, Gerrit J., Conners, Shannon B., Montero, Clemente I., Johnson, Matthew R., ...

Pyrococcus furiosus utilizes starch and its degradation products, such as maltose, as primary carbon sources, but the pathways by which these α-glucans are processed have yet to be defined. For...

Colocation of Genes Encoding a tRNA-mRNA Hybrid and a Putative Signaling Peptide on Complementary Strands in the Genome of the Hyperthermophilic Bacterium Thermotoga maritima†

Montero, Clemente I., Lewis, Derrick L., Johnson, Matthew R., Conners, Shannon B., Nance, Elizabeth A., Nichols, Jason D., ...

In the genome of the hyperthermophilic bacterium Thermotoga maritima, TM0504 encodes a putative signaling peptide implicated in population density-dependent exopolysaccharide formation. Although not...

Role of the β1 Subunit in the Function and Stability of the 20S Proteasome in the Hyperthermophilic Archaeon Pyrococcus furiosus▿

Madding, Lara S., Michel, Joshua K., Shockley, Keith R., Conners, Shannon B., Epting, Kevin L., Johnson, Matthew R., ...

The hyperthermophilic archaeon Pyrococcus furiosus genome encodes three proteasome component proteins: one α protein (PF1571) and two β proteins (β1-PF1404 and β2-PF0159), as well as an ATPase...

Responses of Wild-Type and Resistant Strains of the Hyperthermophilic Bacterium Thermotoga maritima to Chloramphenicol Challenge▿ †

Montero, Clemente I., Johnson, Matthew R., Chou, Chung-Jung, Conners, Shannon B., Geouge, Sarah G., Tachdjian, Sabrina, ...

Transcriptomes and growth physiologies of the hyperthermophile Thermotoga maritima and an antibiotic-resistant spontaneous mutant were compared prior to and following exposure to chloramphenicol....