Bmc Bioinformatics, Jamie J Cannone, Sankar Subramanian, Murray N Schnare, James R Collett, Lisa M D'souza, ...
The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal,
Bmc Bioinformatics, Jamie J Cannone, Sankar Subramanian, Murray N Schnare, James R Collett, Lisa M D'souza, ...
Research article
Jackson, Christopher J, Norman, John E, Schnare, Murray N, Gray, Michael W, Keeling, Patrick J, Waller, Ross F
Abstract Background Dinoflagellates comprise an ecologically significant and diverse eukaryotic phylum that is sister to the phylum containing apicomplexan endoparasites. The mitochondrial genome of...
BMC Biology BioMed Central (2007)
Christopher J Jackson, John E Norman, Murray N Schnare, Michael W Gray, Patrick J Keeling, Ross F Waller, ...
Research article Broad genomic and transcriptional analysis reveals a highly derived genome in dinoflagellate mitochondria
Pseudouridine-guide RNAs and other Cbf5p-associated RNAs in Euglena gracilis (2004)
RUSSELL, ANTHONY G., SCHNARE, MURRAY N., GRAY, MICHAEL W.
In eukaryotes, box H/ACA small nucleolar RNAs (snoRNAs) guide sites of pseudouridine (Ψ) formation in rRNA. These snoRNAs reside in RNP complexes containing the putative Ψ synthase, Cbf5p. In this...
Fan, Jinshui, Schnare, Murray N., Lee, Robert W.
We have identified previously in mitochondrial DNA of the colorless, chlorophycean, green algal taxon, Polytomella parva, potential coding regions for four small subunit (SSU) and eight large subunit...
Discovery and characterization of Acanthamoeba castellanii mitochondrial 5S rRNA (2003)
BULLERWELL, CHARLES E., SCHNARE, MURRAY N., GRAY, MICHAEL W.
Although 5S rRNA is a highly conserved and universal component of eubacterial, archaeal, chloroplast, and eukaryotic cytoplasmic ribosomes, a mitochondrial DNA-encoded 5S rRNA has so far been...
Cannone, Jamie J, Subramanian, Sankar, Schnare, Murray N, Collett, James R, D'Souza, Lisa M, Du, Yushi, ...
No abstract available.
Cannone, Jamie J, Subramanian, Sankar, Schnare, Murray N, Collett, James R, D'Souza, Lisa M, Du, Yushi, ...
Abstract Background Comparative analysis of RNA sequences is the basis for the detailed and accurate predictions of RNA structure and the determination of phylogenetic relationships for organisms...
Greenwood, Spencer J., Schnare, Murray N., Cook, James R., Gray, Michael W.
We report here the sequence of the 1743 bp intergenic spacer (IGS) that separates the 3′-end of the large subunit ribosomal RNA (rRNA) gene from the 5′-end of the small subunit (SSU) rRNA gene in...
Schnare, Murray N., Collings, James C., Spencer, David F., Gray, Michael W.
In Crithidia fasciculata, the ribosomal RNA (rRNA) gene repeats range in size from ∼11 to 12 kb. This length heterogeneity is localized to a region of the intergenic spacer (IGS) that contains...
Schnare, Murray N., Yepiz-Plascencia, Gloria M., Copertino, Donald W., Hallick, Richard B., Gray, Michael W.
Ribosomal RNA structure and evolution revealed by nucleotide sequence analysis [microform] / (1985)
Thesis (Ph. D.)--Dalhousie University, 1984.
Nucleotide sequence of an exceptionally long 5.8S ribosomal RNA from Crithidia fasciculata (1982)
Schnare, Murray N., Gray, Michael W
In Crithidia fasciculata, a trypanosomatid protozoan, the large ribosomal subunit contains five small RNA species (e, f, g, i, j) in addition to 5S rRNA [Gray, M.W. (1981) Mol. Cell, Biol. 1,...
Schnare, Murray N., Gray, Michael W.
We have determined the sequences of the 3′-terminal {small tilde}100 nucleotides of [5{small tilde}-32P]pCp-labeled wheat mitochondrial, wheat cytosol, and E. coli small subunit rRNAs. Sequence...
U1 small nuclear RNA and spliceosomal introns in Euglena gracilis
Breckenridge, David G., Watanabe, Yoh-ichi, Greenwood, Spencer J., Gray, Michael W., Schnare, Murray N.
In the flagellated protozoon Euglena gracilis, characterized nuclear genes harbor atypical introns that usually are flanked by short repeats, adopt complex secondary structures in pre-mRNA, and do...
Greenwood, Spencer J., Schnare, Murray N., Cook, James R., Gray, Michael W.
We report here the sequence of the 1743 bp intergenic spacer (IGS) that separates the 3′-end of the large subunit ribosomal RNA (rRNA) gene from the 5′-end of the small subunit (SSU) rRNA gene in...
Cannone, Jamie J, Subramanian, Sankar, Schnare, Murray N, Collett, James R, D'Souza, Lisa M, Du, Yushi, ...
Schnare, Murray N., Collings, James C., Spencer, David F., Gray, Michael W.
In Crithidia fasciculata, the ribosomal RNA (rRNA) gene repeats range in size from ∼11 to 12 kb. This length heterogeneity is localized to a region of the intergenic spacer (IGS) that contains...
Cannone, Jamie J, Subramanian, Sankar, Schnare, Murray N, Collett, James R, D'Souza, Lisa M, Du, Yushi, ...
Fan, Jinshui, Schnare, Murray N., Lee, Robert W.
We have identified previously in mitochondrial DNA of the colorless, chlorophycean, green algal taxon, Polytomella parva, potential coding regions for four small subunit (SSU) and eight large subunit...
Multiple spacer sequences in the nuclear large subunit ribosomal RNA gene of Crithidia fasciculata
Spencer, David F., Collings, James C., Schnare, Murray N., Gray, Michael W.
In Crithidia fasciculata, a trypanosomatid protozoan, the nuclear-encoded `28S' rRNA is multiply fragmented, comprising two large (c and d) and four small (e, f, g and j) RNA species. We have...
Discovery and characterization of Acanthamoeba castellanii mitochondrial 5S rRNA
BULLERWELL, CHARLES E., SCHNARE, MURRAY N., GRAY, MICHAEL W.
Although 5S rRNA is a highly conserved and universal component of eubacterial, archaeal, chloroplast, and eukaryotic cytoplasmic ribosomes, a mitochondrial DNA-encoded 5S rRNA has so far been...
Pseudouridine-guide RNAs and other Cbf5p-associated RNAs in Euglena gracilis
RUSSELL, ANTHONY G., SCHNARE, MURRAY N., GRAY, MICHAEL W.
In eukaryotes, box H/ACA small nucleolar RNAs (snoRNAs) guide sites of pseudouridine (Ψ) formation in rRNA. These snoRNAs reside in RNP complexes containing the putative Ψ synthase, Cbf5p. In this...
U1 small nuclear RNA and spliceosomal introns in Euglena gracilis
Breckenridge, David G., Watanabe, Yoh-ichi, Greenwood, Spencer J., Gray, Michael W., Schnare, Murray N.
In the flagellated protozoon Euglena gracilis, characterized nuclear genes harbor atypical introns that usually are flanked by short repeats, adopt complex secondary structures in pre-mRNA, and do...
Greenwood, Spencer J., Schnare, Murray N., Cook, James R., Gray, Michael W.
We report here the sequence of the 1743 bp intergenic spacer (IGS) that separates the 3′-end of the large subunit ribosomal RNA (rRNA) gene from the 5′-end of the small subunit (SSU) rRNA gene in...
Cannone, Jamie J, Subramanian, Sankar, Schnare, Murray N, Collett, James R, D'Souza, Lisa M, Du, Yushi, ...
Schnare, Murray N., Collings, James C., Spencer, David F., Gray, Michael W.
In Crithidia fasciculata, the ribosomal RNA (rRNA) gene repeats range in size from ∼11 to 12 kb. This length heterogeneity is localized to a region of the intergenic spacer (IGS) that contains...
Cannone, Jamie J, Subramanian, Sankar, Schnare, Murray N, Collett, James R, D'Souza, Lisa M, Du, Yushi, ...
Fan, Jinshui, Schnare, Murray N., Lee, Robert W.
We have identified previously in mitochondrial DNA of the colorless, chlorophycean, green algal taxon, Polytomella parva, potential coding regions for four small subunit (SSU) and eight large subunit...
Multiple spacer sequences in the nuclear large subunit ribosomal RNA gene of Crithidia fasciculata
Spencer, David F., Collings, James C., Schnare, Murray N., Gray, Michael W.
In Crithidia fasciculata, a trypanosomatid protozoan, the nuclear-encoded `28S' rRNA is multiply fragmented, comprising two large (c and d) and four small (e, f, g and j) RNA species. We have...
Discovery and characterization of Acanthamoeba castellanii mitochondrial 5S rRNA
BULLERWELL, CHARLES E., SCHNARE, MURRAY N., GRAY, MICHAEL W.
Although 5S rRNA is a highly conserved and universal component of eubacterial, archaeal, chloroplast, and eukaryotic cytoplasmic ribosomes, a mitochondrial DNA-encoded 5S rRNA has so far been...
Pseudouridine-guide RNAs and other Cbf5p-associated RNAs in Euglena gracilis
RUSSELL, ANTHONY G., SCHNARE, MURRAY N., GRAY, MICHAEL W.
In eukaryotes, box H/ACA small nucleolar RNAs (snoRNAs) guide sites of pseudouridine (Ψ) formation in rRNA. These snoRNAs reside in RNP complexes containing the putative Ψ synthase, Cbf5p. In this...
Jackson, Christopher J, Norman, John E, Schnare, Murray N, Gray, Michael W, Keeling, Patrick J, Waller, Ross F
Different Mechanisms for Pseudouridine Formation in Yeast 5S and 5.8S rRNAs▿
Decatur, Wayne A., Schnare, Murray N.
The selection of sites for pseudouridylation in eukaryotic cytoplasmic rRNA occurs by the base pairing of the rRNA with specific guide sequences within the RNA components of box H/ACA small nucleolar...