Bmc Bioinformatics, Nameeta Shah, Michael V Teplitsky, Simon Minovitsky, Len A Pennacchio, Philip Hugenholtz, ...
Software SNP-VISTA: An interactive SNP visualization tool
Abstract Volume Visualization of Multiple Alignment of Genomic DNA (2008)
Nameeta Shah, Gunther H. Weber, Scott E. Dillard, Bernd Hamann
Genomes of hundreds of species have been sequenced to date and many more are being sequenced. As more and more sequence data sets become available, and as the challenge of comparing these massive...
* Corresponding authors Summary (2008)
Nameeta Shah, Olivier Couronne, Len A. Pennacchio, Michael Brudno, Serafim Batzoglou, Wes Bethel, ...
The power of multi-sequence comparison for biological discovery is well established. The need for new capabilities to visualize and compare cross-species alignment data is intensified by the growing...
ยง To whom correspondence should be addressed (2008)
Nameeta Shah, Michael V. Teplitsky, Simon Minovitsky, Len A. Pennacchio, Philip Hugenholtz, Bernd Hamann, ...
Background Recent advances in sequencing technologies promise to provide a better understanding of the genetics of human disease as well as the evolution of microbial populations. Single Nucleotide...
Volume visualization of multiple alignment of large genomic DNA (2006)
Nameeta Shah, Scott E. Dillard, Gunther H. Weber, Bernd Hamann
Summary. Genomes of hundreds of species have been sequenced to date, and many more are being sequenced. As more and more sequence data sets become available, and as the challenge of comparing these...
SNP-VISTA: An interactive SNP visualization tool (2005)
Shah, Nameeta, Teplitsky, Michael V, Minovitsky, Simon, Pennacchio, Len A, Hugenholtz, Philip, Hamann, Bernd, ...
Abstract Background Recent advances in sequencing technologies promise to provide a better understanding of the genetics of human disease as well as the evolution of microbial populations. Single...
SNP-VISTA: An interactive SNP visualization tool (2005)
Shah, Nameeta, Teplitsky, Michael V, Minovitsky, Simon, Pennacchio, Len A, Hugenholtz, Philip, Hamann, Bernd, ...
Background: Recent advances in sequencing technologies promise to provide a better understanding of the genetics of human disease as well as the evolution of microbial populations. Single Nucleotide...
Volume visualization of multiple alignment of large genomic DNA (2005)
Shah, Nameeta, Dillard, Scott E., Weber, Gunther H., Hamann, Bernd
SNP-VISTA: An Interactive SNPs Visualization Tool (2005)
Shah, Nameeta, Teplitsky, Michael V., Pennacchio, Len A., Hugenholtz, Philip, Hamann, Bernd, Dubchak, Inna L.
Recent advances in sequencing technologies promise better diagnostics for many diseases as well as better understanding of evolution of microbial populations. Single Nucleotide Polymorphisms (SNPs)...
Volume visualization of multiple alignment of genomic DNA (2004)
Shah, Nameeta, Weber, Gunther H., Dillard, Scott E., Hamann, Bernd
Genomes of hundreds of species have been sequenced to date and many more are being sequenced. As more and more sequence data sets become available, and as the challenge of comparing these massive...
Phylo-VISTA: An Interactive Visualization Tool for Multiple DNA Sequence Alignments (2004)
Shah, Nameeta, Couronne, Olivier, Pennacchio, Len A., Brudno, Michael, Batzoglou, Serafim, Bethel, E. Wes, ...
We have developed Phylo-VISTA (Shah et al., 2003), an interactive software tool for analyzing multiple alignments by visualizing a similarity measure for DNA sequences of multiple species. The...
Phylo-VISTA: interactive visualization of multiple DNA sequence alignments (2004)
Shah, Nameeta, Couronne, Olivier, Pennacchio, Len A., Brudno, Michael, Batzoglou, Serafim, Wes Bethel, E., ...
Motivation The power of multi-sequence comparison for biological discovery is well established. The need for new capabilities to visualize and compare cross-species alignment data is intensified by...
Phylo-VISTA: interactive visualization of multiple DNA sequence alignments (2004)
Shah, Nameeta, Couronne, Olivier, Pennacchio, Len A., Brudno, Michael, Batzoglou, Serafim, Bethel, E. Wes, ...
Motivation: The power of multi-sequence comparison for biological discovery is well established. The need for new capabilities to visualize and compare cross-species alignment data is intensified by...
Phylo-VISTA: interactive visualization of multiple DNA sequence alignments (2004)
Shah, Nameeta, Couronne, Olivier, Pennacchio, Len A., Brudno, Michael, Batzoglou, Serafim, Wes Bethel, E., ...
Motivation The power of multi-sequence comparison for biological discovery is well established. The need for new capabilities to visualize and compare cross-species alignment data is intensified by...
Phylo-VISTA: An interactive visualization tool for multiple DNA sequence alignments (2003)
Shah, Nameeta, Couronne, Olivier, Pennacchio, Len A., Brudno, Michael, Batzoglou, Serafim, Bethel, E. Wes, ...
Motivation. The power of multi-sequence comparison for biological discovery is well established and sequence data from a growing list of organisms is becoming available. Thus, a need exists for...
Phylo-VISTA: An Interactive Visualization Tool for Multiple DNA Sequence Alignments (2003)
Nameeta Shah, Olivier Couronne, Len A. Pennacchio, Michael Brudno, Serafim Batzoglou, E. Wes Bethel, ...
We have developed Phylo-VISTA (Shah et al., 2003) , an interactive software tool for analyzing multiple alignments by visualizing a similarity measure for DNA sequences of multiple species. The...
GeneBox: Interactive Visualization of Microarray Data Sets (2003)
Nameeta Shah, Vladimir Filkov, Bernd Hamann, Kenneth I. Joy
Technological advancements are constantly increasing the size and complexity of data resulting from microarray experiments. This fact has led biologists to ask complex questions, which the existing,...