Crossman, Lisa C, Gould, Virginia C, Dow, J Maxwell, Vernikos, Georgios S, Okazaki, Aki, Sebaihia, Mohammed, ...
Abstract Background Stenotrophomonas maltophilia is a nosocomial opportunistic pathogen of the Xanthomonadaceae. The organism has been isolated from both clinical and soil environments in addition to...
Chlamydia trachomatis: Genome sequence analysis of lymphogranuloma venereum isolates. (2008)
Thomson, Nicholas R., Holden, .Matthew T.G., Carder, C.Caroline, Lennard, Nicola, Lockey, Sarah J., Marsh, Pete, ...
Chlamydia trachomatis is the most common cause of sexually transmitted infections in the UK, a statistic that is also reflected globally. There are three biovariants of C. trachomatis: trachoma...
Walker, Thomas, Klasson, Lisa, Sebaihia, Mohammed, Sanders, Mandy J, Thomson, Nicholas R, Parkhill, Julian, ...
Abstract Background Wolbachia are obligate endosymbiotic bacteria maternally transmitted through the egg cytoplasm that are responsible for several reproductive disorders in their insect hosts, such...
Genetic flux over time in the Salmonellalineage (2007)
Vernikos, Georgios S, Thomson, Nicholas R, Parkhill, Julian
Abstract Background DNA sequences that are shared between closely related organisms while being absent from their common ancestor and from sister lineages of that ancestor are likely to have been...
Nicholas R. Thomson, Sarah Howard, Brendan W. Wren, Lisa Crossman, Gregory L. Challis, ...
The human enteropathogen, Yersinia enterocolitica, is a significant link in the range of Yersinia pathologies extending from mild gastroenteritis to bubonic plague. Comparison at the genomic level is...
The genome of Rhizobium leguminosarumhas recognizable core and accessory components (2006)
Young, J Peter W, Crossman, Lisa C, Johnston, Andrew WB, Thomson, Nicholas R, Ghazoui, Zara F, Hull, Katherine H, ...
Abstract Background Rhizobium leguminosarum is an α-proteobacterial N 2 -fixing symbiont of legumes that has been the subject of more than a thousand publications. Genes for the symbiotic...
Microevolution and history of the plague bacillus, Yersinia pestis (2004)
Achtman,Mark, Morelli,Giovanna, Zhu,Peixuan X., Wirth,Thierry, Diehl,Ines, Kusecek,Barica, ...
The association of historical plague pandemics with Yersinia pestis remains controversial, partly because the evolutionary history of this largely monomorphic bacterium was unknown. The...
Microevolution and history of the plague bacillus, Yersinia pestis (2004)
Achtman, Mark, Morelli, Giovanna, Zhu, Peixuan X., Wirth, Thierry, Diehl, Ines, Kusecek, Barica, ...
Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei (2004)
Holden, Matthew T. G., Titball, Richard W., Peacock, Sharon J., Cerdeno-Tarraga, Ana M., Atkins, Timothy, Crossman, Lisa C., ...
Yes
Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei (2004)
Holden, Matthew T. G., Titball, Richard W., Peacock, Sharon J., Cerdeno-Tarraga, Ana M., Atkins, Timothy, Crossman, Lisa C., ...
Yes
Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei (2004)
Holden, Matthew T. G., Titball, Richard W., Peacock, Sharon J., Cerdeno-Tarraga, Ana M., Atkins, Timothy, Crossman, Lisa C., ...
Thesis (Ph. D.)--University of Warwick, 1996.
Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei
Holden, Matthew T. G., Titball, Richard W., Peacock, Sharon J., Cerdeño-Tárraga, Ana M., Atkins, Timothy, Crossman, Lisa C., ...
Burkholderia pseudomallei is a recognized biothreat agent and the causative agent of melioidosis. This Gram-negative bacterium exists as a soil saprophyte in melioidosis-endemic areas of the world...
Microevolution and history of the plague bacillus, Yersinia pestis
Achtman, Mark, Morelli, Giovanna, Zhu, Peixuan, Wirth, Thierry, Diehl, Ines, Kusecek, Barica, ...
The association of historical plague pandemics with Yersinia pestis remains controversial, partly because the evolutionary history of this largely monomorphic bacterium was unknown. The...
Collins, Nicola E., Liebenberg, Junita, De Villiers, Etienne P., Brayton, Kelly A., Louw, Elmarié, Pretorius, Alri, ...
Heartwater, a tick-borne disease of domestic and wild ruminants, is caused by the intracellular rickettsia Ehrlichia ruminantium (previously known as Cowdria ruminantium). It is a major constraint to...
Thomson, Nicholas R., Yeats, Corin, Bell, Kenneth, Holden, Matthew T.G., Bentley, Stephen D., Livingstone, Morag, ...
The obligate intracellular bacterial pathogen Chlamydophila abortus strain S26/3 (formerly the abortion subtype of Chlamydia psittaci) is an important cause of late gestation abortions in ruminants...
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Riley, Monica, Abe, Takashi, Arnaud, Martha B., Berlyn, Mary K.B., Blattner, Frederick R., Chaudhuri, Roy R., ...
The goal of this group project has been to coordinate and bring up-to-date information on all genes of Escherichia coli K-12. Annotation of the genome of an organism entails identification of genes,...
The genome of Rhizobium leguminosarum has recognizable core and accessory components
Young, J Peter W, Crossman, Lisa C, Johnston, Andrew WB, Thomson, Nicholas R, Ghazoui, Zara F, Hull, Katherine H, ...
The genome sequence of the α-proteobacterial N2-fixing symbiont of legumes, Rhizobium leguminosarum, is described, revealing a 'core' and an 'accessory' component.
Sebaihia, Mohammed, Preston, Andrew, Maskell, Duncan J., Kuzmiak, Holly, Connell, Terry D., King, Natalie D., ...
Bordetella avium is a pathogen of poultry and is phylogenetically distinct from Bordetella bronchiseptica, Bordetella pertussis, and Bordetella parapertussis, which are other species in the...
Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei
Holden, Matthew T. G., Titball, Richard W., Peacock, Sharon J., Cerdeño-Tárraga, Ana M., Atkins, Timothy, Crossman, Lisa C., ...
Burkholderia pseudomallei is a recognized biothreat agent and the causative agent of melioidosis. This Gram-negative bacterium exists as a soil saprophyte in melioidosis-endemic areas of the world...
Microevolution and history of the plague bacillus, Yersinia pestis
Achtman, Mark, Morelli, Giovanna, Zhu, Peixuan, Wirth, Thierry, Diehl, Ines, Kusecek, Barica, ...
The association of historical plague pandemics with Yersinia pestis remains controversial, partly because the evolutionary history of this largely monomorphic bacterium was unknown. The...
Collins, Nicola E., Liebenberg, Junita, De Villiers, Etienne P., Brayton, Kelly A., Louw, Elmarié, Pretorius, Alri, ...
Heartwater, a tick-borne disease of domestic and wild ruminants, is caused by the intracellular rickettsia Ehrlichia ruminantium (previously known as Cowdria ruminantium). It is a major constraint to...
Thomson, Nicholas R., Yeats, Corin, Bell, Kenneth, Holden, Matthew T.G., Bentley, Stephen D., Livingstone, Morag, ...
The obligate intracellular bacterial pathogen Chlamydophila abortus strain S26/3 (formerly the abortion subtype of Chlamydia psittaci) is an important cause of late gestation abortions in ruminants...
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Riley, Monica, Abe, Takashi, Arnaud, Martha B., Berlyn, Mary K.B., Blattner, Frederick R., Chaudhuri, Roy R., ...
The goal of this group project has been to coordinate and bring up-to-date information on all genes of Escherichia coli K-12. Annotation of the genome of an organism entails identification of genes,...
Sebaihia, Mohammed, Preston, Andrew, Maskell, Duncan J., Kuzmiak, Holly, Connell, Terry D., King, Natalie D., ...
Bordetella avium is a pathogen of poultry and is phylogenetically distinct from Bordetella bronchiseptica, Bordetella pertussis, and Bordetella parapertussis, which are other species in the...
The genome of Rhizobium leguminosarum has recognizable core and accessory components
Young, J Peter W, Crossman, Lisa C, Johnston, Andrew WB, Thomson, Nicholas R, Ghazoui, Zara F, Hull, Katherine H, ...
The genome sequence of the α-proteobacterial N2-fixing symbiont of legumes, Rhizobium leguminosarum, is described, revealing a 'core' and an 'accessory' component.
Thomson, Nicholas R, Howard, Sarah, Wren, Brendan W, Holden, Matthew T. G, Crossman, Lisa, Challis, Gregory L, ...
The human enteropathogen, Yersinia enterocolitica, is a significant link in the range of Yersinia pathologies extending from mild gastroenteritis to bubonic plague. Comparison at the genomic level is...
Didelot, Xavier, Achtman, Mark, Parkhill, Julian, Thomson, Nicholas R., Falush, Daniel
All Salmonella can cause disease but severe systemic infections are primarily caused by a few lineages. Paratyphi A and Typhi are the deadliest human restricted serovars, responsible for ∼600,000...
Holt, Kathryn E., Thomson, Nicholas R., Wain, John, Phan, Minh Duy, Nair, Satheesh, Hasan, Rumina, ...
Salmonella enterica serovars Typhi and Paratyphi A cause systemic infections in humans which are referred to as enteric fever. Multidrug-resistant (MDR) serovar Typhi isolates emerged in the 1980s,...
Ankyrin repeat domain-encoding genes in the wPip strain of Wolbachia from the Culex pipiens group
Walker, Thomas, Klasson, Lisa, Sebaihia, Mohammed, Sanders, Mandy J, Thomson, Nicholas R, Parkhill, Julian, ...
Sebaihia, Mohammed, Peck, Michael W., Minton, Nigel P., Thomson, Nicholas R., Holden, Matthew T.G., Mitchell, Wilfrid J., ...
Clostridium botulinum is a heterogeneous Gram-positive species that comprises four genetically and physiologically distinct groups of bacteria that share the ability to produce botulinum neurotoxin,...
MacLennan, Calman A., Gondwe, Esther N., Msefula, Chisomo L., Kingsley, Robert A., Thomson, Nicholas R., White, Sarah A., ...
Nontyphoidal strains of Salmonella (NTS) are a common cause of bacteremia among African children. Cell-mediated immune responses control intracellular infection, but they do not protect against...
Genetic flux over time in the Salmonella lineage
Vernikos, Georgios S, Thomson, Nicholas R, Parkhill, Julian
From a whole-genome comparative analysis of Salmonella, Escherichia coli and Shigella strains, the relative time of insertion of putative horizontally acquired genes in three Salmonella strains were...
Chlamydia trachomatis: Genome sequence analysis of lymphogranuloma venereum isolates
Thomson, Nicholas R., Holden, Matthew T.G., Carder, Caroline, Lennard, Nicola, Lockey, Sarah J., Marsh, Pete, ...
Chlamydia trachomatis is the most common cause of sexually transmitted infections in the UK, a statistic that is also reflected globally. There are three biovariants of C. trachomatis: trachoma...
Revilla, Carlos, Garcillán-Barcia, M. Pilar, Fernández-López, Raúl, Thomson, Nicholas R., Sanders, Mandy, Cheung, Martin, ...
DNA sequence analysis of five IncW plasmids (R388, pSa, R7K, pIE321, and pIE522) demonstrated that they share a considerable portion of their genomes and allowed us to define the IncW backbone. Among...
Molecular Characterization of the Salmonella enterica Serovar Typhi Vi-Typing Bacteriophage E1▿
Pickard, Derek, Thomson, Nicholas R., Baker, Stephen, Wain, John, Pardo, Mercedes, Goulding, David, ...
Some bacteriophages target potentially pathogenic bacteria by exploiting surface-associated virulence factors as receptors. For example, phage have been identified that exhibit specificity for Vi...
Pearson, Melanie M., Sebaihia, Mohammed, Churcher, Carol, Quail, Michael A., Seshasayee, Aswin S., Luscombe, Nicholas M., ...
The gram-negative enteric bacterium Proteus mirabilis is a frequent cause of urinary tract infections in individuals with long-term indwelling catheters or with complicated urinary tracts (e.g., due...