Patricia E. Klein

A consensus genetic map of sorghum that integrates multiple component maps and high-throughput Diversity Array Technology (DArT) markers (2009)

Mace, Emma S, Rami, Jean-Francois, Bouchet, Sophie, Klein, Patricia E, Klein, Robert R, Kilian, Andrzej, ...

Abstract Background Sorghum genome mapping based on DNA markers began in the early 1990s and numerous genetic linkage maps of sorghum have been published in the last decade, based initially on RFLP...

A gene in the multidrug and toxic compound extrusion (MATE) family confers aluminum tolerance in sorghum (2007)

Jurandir V Magalhaes, Jiping Liu, Claudia T Guimarães, Ubiraci G P Lana, Vera M C Alves, Yi-Hong Wang, ...

A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps (2007)

Yim, Young-Sun, Moak, Patricia, Sanchez-Villeda, Hector, Musket, Theresa A, Close, Pamela, Klein, Patricia E, ...

Abstract Background Molecular markers serve three important functions in physical map assembly. First, they provide anchor points to genetic maps facilitating functional genomic studies. Second, they...

A High-throughput AFLP-based Method for Constructing Integrated Genetic and Physical Maps: Progress Toward a Sorghum Genome Map (2000)

Klein, Patricia E., Klein, Robert R., Cartinhour, Samuel W., Ulanch, Paul E., Dong, Jianmin, Obert, Jacque A., ...

A High-throughput AFLP-based Method for Constructing Integrated Genetic and Physical Maps: Progress Toward a Sorghum Genome Map

Klein, Patricia E., Klein, Robert R., Cartinhour, Samuel W., Ulanch, Paul E., Dong, Jianmin, Obert, Jacque A., ...

Sorghum is an important target for plant genomic mapping because of its adaptation to harsh environments, diverse germplasm collection, and value for comparing the genomes of grass species such as...

Transcriptional Profiling of Sorghum Induced by Methyl Jasmonate, Salicylic Acid, and Aminocyclopropane Carboxylic Acid Reveals Cooperative Regulation and Novel Gene Responses1[w]

Salzman, Ron A., Brady, Jeff A., Finlayson, Scott A., Buchanan, Christina D., Summer, Elizabeth J., Sun, Feng, ...

We have conducted a large-scale study of gene expression in the C4 monocot sorghum (Sorghum bicolor) L. Moench cv BTx623 in response to the signaling compounds salicylic acid (SA), methyl jasmonate...

Phylogenetic Analysis of 5′-Noncoding Regions From the ABA-Responsive rab16/17 Gene Family of Sorghum, Maize and Rice Provides Insight Into the Composition, Organization and Function of cis-Regulatory Modules

Buchanan, Christina D., Klein, Patricia E., Mullet, John E.

Phylogenetic analysis of sequences from gene families and homologous genes from species of varying divergence can be used to identify conserved noncoding regulatory elements. In this study,...

Molecular Cytogenetic Maps of Sorghum Linkage Groups 2 and 8

Kim, Jeong-Soon, Klein, Patricia E., Klein, Robert R., Price, H. James, Mullet, John E., Stelly, David M.

To integrate genetic, physical, and cytological perspectives of the Sorghum bicolor genome, we selected 40 landed bacterial artificial chromosome (BAC) clones that contain different linkage map...

Chromosome Identification and Nomenclature of Sorghum bicolor

Kim, Jeong-Soon, Klein, Patricia E., Klein, Robert R., Price, H. James, Mullet, John E., Stelly, David M.

Linkage group identities and homologies were determined for metaphase chromosomes of Sorghum bicolor (2n = 20) by FISH of landed BACs. Relative lengths of chromosomes in FISH-karyotyped metaphase...

Comparative mapping of a major aluminum tolerance gene in sorghum and other species in the poaceae.

Magalhaes, Jurandir V, Garvin, David F, Wang, Yihong, Sorrells, Mark E, Klein, Patricia E, Schaffert, Robert E, ...

In several crop species within the Triticeae tribe of the grass family Poaceae, single major aluminum (Al) tolerance genes have been identified that effectively mitigate Al toxicity, a major abiotic...

A High-throughput AFLP-based Method for Constructing Integrated Genetic and Physical Maps: Progress Toward a Sorghum Genome Map

Klein, Patricia E., Klein, Robert R., Cartinhour, Samuel W., Ulanch, Paul E., Dong, Jianmin, Obert, Jacque A., ...

Sorghum is an important target for plant genomic mapping because of its adaptation to harsh environments, diverse germplasm collection, and value for comparing the genomes of grass species such as...

Transcriptional Profiling of Sorghum Induced by Methyl Jasmonate, Salicylic Acid, and Aminocyclopropane Carboxylic Acid Reveals Cooperative Regulation and Novel Gene Responses1[w]

Salzman, Ron A., Brady, Jeff A., Finlayson, Scott A., Buchanan, Christina D., Summer, Elizabeth J., Sun, Feng, ...

We have conducted a large-scale study of gene expression in the C4 monocot sorghum (Sorghum bicolor) L. Moench cv BTx623 in response to the signaling compounds salicylic acid (SA), methyl jasmonate...

Phylogenetic Analysis of 5′-Noncoding Regions From the ABA-Responsive rab16/17 Gene Family of Sorghum, Maize and Rice Provides Insight Into the Composition, Organization and Function of cis-Regulatory Modules

Buchanan, Christina D., Klein, Patricia E., Mullet, John E.

Phylogenetic analysis of sequences from gene families and homologous genes from species of varying divergence can be used to identify conserved noncoding regulatory elements. In this study,...

Molecular Cytogenetic Maps of Sorghum Linkage Groups 2 and 8

Kim, Jeong-Soon, Klein, Patricia E., Klein, Robert R., Price, H. James, Mullet, John E., Stelly, David M.

To integrate genetic, physical, and cytological perspectives of the Sorghum bicolor genome, we selected 40 landed bacterial artificial chromosome (BAC) clones that contain different linkage map...

Chromosome Identification and Nomenclature of Sorghum bicolor

Kim, Jeong-Soon, Klein, Patricia E., Klein, Robert R., Price, H. James, Mullet, John E., Stelly, David M.

Linkage group identities and homologies were determined for metaphase chromosomes of Sorghum bicolor (2n = 20) by FISH of landed BACs. Relative lengths of chromosomes in FISH-karyotyped metaphase...

Comparative mapping of a major aluminum tolerance gene in sorghum and other species in the poaceae.

Magalhaes, Jurandir V, Garvin, David F, Wang, Yihong, Sorrells, Mark E, Klein, Patricia E, Schaffert, Robert E, ...

In several crop species within the Triticeae tribe of the grass family Poaceae, single major aluminum (Al) tolerance genes have been identified that effectively mitigate Al toxicity, a major abiotic...

A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps

Yim, Young-Sun, Moak, Patricia, Sanchez-Villeda, Hector, Musket, Theresa A, Close, Pamela, Klein, Patricia E, ...

A consensus genetic map of sorghum that integrates multiple component maps and high-throughput Diversity Array Technology (DArT) markers

Mace, Emma S, Rami, Jean-Francois, Bouchet, Sophie, Klein, Patricia E, Klein, Robert R, Kilian, Andrzej, ...

Sequence Analysis of Bacterial Artificial Chromosome Clones from the Apospory-Specific Genomic Region of Pennisetum and Cenchrus1[W][OA]

Conner, Joann A., Goel, Shailendra, Gunawan, Gunawati, Cordonnier-Pratt, Marie-Michele, Johnson, Virgil Ed, Liang, Chun, ...

Apomixis, asexual reproduction through seed, is widespread among angiosperm families. Gametophytic apomixis in Pennisetum squamulatum and Cenchrus ciliaris is controlled by the apospory-specific...