Patrik Edén, Markus Ringnér, Bo Baldetorp, Gunilla Chebil, A Ke Borg, ...
continuous values of prognostic markers in breast
Abstract Background For 2-dye microarray platforms, some missing values may arise from an un-measurably low RNA expression in one channel only. Information of such "one-channel depletion" is so far...
Article type Methodology article (2008)
Bmc Genomics, Cecilia Ritz, Cecilia Ritz, Patrik Edén
This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. Accounting for one-channel depletion...
Baryon Production in the String Fragmentation Picture (2007)
: An improved version of the "pop-corn" model for baryon production in quark and gluon jets is presented. With a reduced number of parameters the model reproduces well both production rates...
Classification Of Expression, Markus Ringnér, Patrik Edén, Peter Johansson
Introduction Artificial neural networks in the form of feed-forward networks (ANNs) have emerged as a practical technology for classification with applications in many fields. ANNs have in particular...
Sofia K Gruvberger, Markus Ringnér, Patrik Edén, Åke Borg, Mårten Fernö, Carsten Peterson, ...
Breast Cancer Research Vol 5 No 1 Gruvberger et al.
LU TP 02-16 April 2002 Revised October 2002 A Simple Model for the Arterial System (2007)
Hans-uno Bengtsson, Patrik Edén
We present a simple model for the arterial part of the cardiovascular system, based on Poiseuille flow constrained by the power dissipated into the cells lining the vessels. This, together with the...
Francis, Princy, Namløs, Heidi, Müller, Christoph, Edén, Patrik, Fernebro, Josefin, Berner, Jeanne-Marie, ...
Abstract Background Soft tissue sarcoma (STS) diagnosis is challenging because of a multitude of histopathological subtypes, different genetic characteristics, and frequent intratumoral pleomorphism....
Francis, Princy, Namlos, Heidi Maria, Müller, Christoph, Edén, Patrik, Fernebro, Josefin, Berner, Jeanne-Marie, ...
Abstract is not available
Gruvberger Saal, Sofia K, Bendahl, Par-Ola, Saal, Lao H, Laakso, Mervi, Hegardt, Cecilia, Edén, Patrik, ...
Abstract is not available
Francis, Princy, Namløs, Heidi Maria, Christoph Müller, Christoph, Edén, Patrik, Fernebro, Josefin, Berner, Jeanne-Marie, ...
Background Soft tissue sarcoma (STS) diagnosis is challenging because of a multitude of histopathological subtypes, different genetic characteristics, and frequent intratumoral pleomorphism....
Pulsatile blood flow, shear force, energy dissipation and Murray's Law (2006)
Painter, Page R, Edén, Patrik, Bengtsson, Hans-Uno
Abstract Background Murray's Law states that, when a parent blood vessel branches into daughter vessels, the cube of the radius of the parent vessel is equal to the sum of the cubes of the radii of...
Niméus-Malmstrom, Emma, Ritz, Cecilia, Edén, Patrik, Johnsson, Anders, Ohlsson, Mattias, Strand, Carina, ...
Abstract is not available
Pulsatile blood flow, shear force, energy dissipation and Murray's Law (2006)
Painter, Page R, Edén, Patrik, Bengtsson, Hans-Uno
Background Murray's Law states that, when a parent blood vessel branches into daughter vessels, the cube of the radius of the parent vessel is equal to the sum of the cubes of the radii of daughter...
Francis, Princy, Fernebro, Josefin, Edén, Patrik, Laurell, Anna, Rydholm, Anders, Domanski, Henryk A, ...
Abstract is not available
Gene expression profiles relate to SS18/SSX fusion type in synovial sarcoma. (2005)
Fernebro, Josefin, Francis, Princy, Edén, Patrik, Borg, Ake, Panagopoulos, Ioannis, Mertens, Fredrik, ...
Abstract is not available
Andersson, Anna, Olofsson, Tor, Lindgren, David, Nilsson, Bjorn, Ritz, Cecilia, Edén, Patrik, ...
Abstract is not available
Comparing functional annotation analyses with Catmap (2004)
Breslin, Thomas, Edén, Patrik, Krogh, Morten
Abstract Background Ranked gene lists from microarray experiments are usually analysed by assigning significance to predefined gene categories, e.g ., based on functional annotations. Tools...
Gruvberger-Saal, Sofia K, Edén, Patrik, Ringnér, Markus, Baldetorp, Bo, Chebil, Gunilla, Borg, Ake, ...
Abstract is not available
Edén, Patrik, Ritz, Cecilia, Rose, Carsten, Fernö, Mårten, Peterson, Carsten
Abstract is not available
BMC Bioinformatics Methodology article Comparing functional annotation analyses with Catmap (2004)
Thomas Breslin, Patrik Edén, Morten Krogh
Background: Ranked gene lists from microarray experiments are usually analysed by assigning significance to predefined gene categories, e.g., based on functional annotations. Tools performing such...
Bmc Bioinformatics, Thomas Breslin, Patrik Eden, Morten Krogh, Thomas Breslin, Patrik Edén, ...
PDF corresponds to the article as it appeared upon acceptance. The fully-formatted PDF version will become available shortly after the date of publication, from the URL listed below. Comparing...
Expression profiling to predict outcome in breast cancer: the influence of sample selection (2003)
Gruvberger, Sofia K, Ringnér, Markus, Edén, Patrik, Borg, Åke, Fernö, Mårten, Peterson, Carsten, ...
Gene expression profiling of tumors using DNA microarrays is a promising method for predicting prognosis and treatment response in cancer patients. It was recently reported that expression profiles...
Expression profiling to predict outcome in breast cancer: the influence of sample selection (2002)
Gruvberger, Sofia K, Ringnér, Markus, Edén, Patrik, Borg, Åke, Fernö, Mårten, Peterson, Carsten, ...
Abstract Gene expression profiling of tumors using DNA microarrays is a promising method for predicting prognosis and treatment response in cancer patients. It was recently reported that expression...
High-Energy-Physics Event Generation with PYTHIA 6.1 (2000)
Sjöstrand, Torbjörn, Edén, Patrik, Friberg, Christer, Lönnblad, Leif, Miu, Gabriela, Mrenna, Stephen, ...
PYTHIA version 6 represents a merger of the PYTHIA 5, JETSET 7 and SPYTHIA programs, with many improvements. It can be used to generate high-energy-physics `events', i.e. sets of outgoing particles...
Hadronization Effects in the Strong Interaction (1998)
Different hadronization effects in high energy interactions are investigated. The frame-work is the Lund model for the strong interaction. A model for baryon production in jet fragmentation is...
Energy and Virtuality Scale Dependence in Quark and Gluon Jets (1998)
: We discuss some important issues concerning multiplicities in quark and gluon jets in e + e \Gamma annihilation. In QCD the properties of a jet in general depends on two scales, the energy and...
Using Two-jet Events to Understand Hadronization (1998)
: While the hard phase of the strong interaction is well described by perturbative QCD, the soft hadronization phase is less understood. Benefiting from the high statistics from e + e \Gamma...
Expression profiling to predict outcome in breast cancer: the influence of sample selection
Gruvberger, Sofia K, Ringnér, Markus, Edén, Patrik, Borg, Åke, Fernö, Mårten, Peterson, Carsten, ...
Gene expression profiling of tumors using DNA microarrays is a promising method for predicting prognosis and treatment response in cancer patients. It was recently reported that expression profiles...
Andersson, Anna, Olofsson, Tor, Lindgren, David, Nilsson, Björn, Ritz, Cecilia, Edén, Patrik, ...
Global expression profiles of a consecutive series of 121 childhood acute leukemias (87 B lineage acute lymphoblastic leukemias, 11 T cell acute lymphoblastic leukemias, and 23 acute myeloid...
Expression profiling to predict outcome in breast cancer: the influence of sample selection
Gruvberger, Sofia K, Ringnér, Markus, Edén, Patrik, Borg, Åke, Fernö, Mårten, Peterson, Carsten, ...
Gene expression profiling of tumors using DNA microarrays is a promising method for predicting prognosis and treatment response in cancer patients. It was recently reported that expression profiles...
Andersson, Anna, Olofsson, Tor, Lindgren, David, Nilsson, Björn, Ritz, Cecilia, Edén, Patrik, ...
Global expression profiles of a consecutive series of 121 childhood acute leukemias (87 B lineage acute lymphoblastic leukemias, 11 T cell acute lymphoblastic leukemias, and 23 acute myeloid...