Two pion scattering, I=0 and disconnected diagrams in Lattice QCD (2009)
A full, high-statistic I=0 and I=2 $\pi-\pi$ scattering calculation including the disconnected diagram is performed on 2+1 flavor, domain wall fermion gauge configurations generated using the Iwasaki...
Analyses of domains and domain fusions in human proto-oncogenes (2009)
Liu, Qi, Huang, Jinling, Liu, Huiqing, Wan, Ping, Ye, Xiuzi, Xu, Ying
Abstract Background Understanding the constituent domains of oncogenes, their origins and their fusions may shed new light about the initiation and the development of cancers. Results We have...
Jian-Lan Liu, Bing-Qian Yao, Qi Liu, Shao-Ming Zhang
The asymmetric unit of the title compound, (C13H11Cl2N2)2[Ni(C4N2S2)2], contains one-half of a centrosymmetric [Ni(mnt)2] anion (where mnt is maleonitriledithiolate or...
Armstrong, Gregory T., Liu, Qi, Yasui, Yutaka, Huang, Sujuan, Ness, Kirsten K., Leisenring, Wendy, ...
Background Adult survivors of childhood central nervous system (CNS) malignancies are at high risk for long-term morbidity and late mortality. However, patterns of late mortality, the long-term risks...
Gene-set analysis and reduction (2009)
Dinu, Irina, Potter, John D., Mueller, Thomas, Liu, Qi, Adewale, Adeniyi J., Jhangri, Gian S., ...
Gene-set analysis aims to identify differentially expressed gene sets (pathways) by a phenotype in DNA microarray studies. We review here important methodological aspects of gene-set analysis and...
Gao, Dongwei, Du, Jiajun, Cong, Lei, Liu, Qi
Objective The aim of this study was to evaluate high-risk factors for initial lung metastases from breast invasive ductal carcinomas in operable patients with Stages I–III invasive ductal...
Laverdière, Caroline, Liu, Qi, Yasui, Yutaka, Nathan, Paul C., Gurney, James G., Stovall, Marilyn, ...
Background The 5-year survival rate for individuals with neuroblastoma is approaching 70%. Few data exist, however, on the long-term outcomes of these patients, who are often treated at a very young...
Function-based Shape Modelling Extension of the Virtual Reality Modelling Language (2008)
In this paper we propose a new approach to web visualisation with VRML based on a function-based shape modelling, which unifies different types of mathematical functions in order to enrich the...
Virtual Campus – It is Fun and Educational (2008)
Alexei Sourin, Konstantin Levinski, Qi Liu
Abstract: Virtual Campus is a shared virtual model of Nanyang Technological University. It is a great multimedia place for electronic education and fun, research and games, meeting new friends, and...
Abstract Function-based Shape Modeling and Visualization in X3D (2008)
In this paper, a function-based extension of Extensible 3D (X3D) is proposed. The extension allows authors to use analytical functions to define geometry, color, 3D texture as well as operations on...
Visual Comput (2006) DOI 10.1007/s00371-006-0044-0 ORIGINAL ARTICLE (2008)
Qi Liu, Alexei Sourin, Q. Liu, A. Sourin
1.1 Visual cyberworlds Visual cyberworlds are shared and often distributed virtual worlds that require exchanging 3D data over the Internet as well as synchronized real-time communication, interaction
for semiantichains and unichain coverings in products of special posets
Some conjectures of Graffiti.pc on total domination (2008)
Ermelinda Delaviña, Qi Liu, Bill Waller, Douglas B. West
In this paper, we present some new upper and lower bounds on the total domination number of a graph that originated as conjectures of Graffiti.pc.
Parallel Environment for DEVS and Cell-DEVS Models (2008)
Qi Liu, Gabriel Wainer, Qi Liu, Gabriel Wainer
On behalf of:
Liu, Qi, Yang, Yu, Chen, Chun, Bu, Jiajun, Zhang, Yin, Ye, Xiuzi
Abstract Background With the rapid emergence of RNA databases and newly identified non-coding RNAs, an efficient compression algorithm for RNA sequence and structural information is needed for the...
Simulating Market Dynamics with CD++ (2008)
Abstract. CD++ is an implementation of the Cell-DEVS formalism, which has been used to simulate various complex systems. In this study, we constructed a Cell-DEVS to simulate the dynamics of a dual...
Performance Analysis of an Optimistic Simulator for CD++ (2008)
DEVS is a formalism to describe generic dynamic systems in a hierarchical and modular way. We present new techniques for executing DEVS and Cell-DEVS models in parallel and distributed environments...
Irina Dinu, Qi Liu, John D. Potter, Adeniyi J. Adewale, Gian S. Jhangri, Thomas Mueller, ...
Gene-set analysis of microarray data evaluates biological pathways, or gene sets, for their differential expression by a phenotype of interest. In contrast to the analysis of individual genes,...
Bis(1,2,3,4-tetrahydroquinolin-6-yl)methane (2008)
The asymmetric unit of the title compound, C19H22N2, contains one half-molecule. The 1,2,3,4-tetrahydroquinoline units are linked by a methylene bridge, which lies on a twofold rotation axis. The...
A Cautionary Note on the Evaluation of Biomarkers of Subtypes of a Single Disease (2008)
Adewale, Adeniyi J., Liu, Qi, Dinu, Irina, Lampe, Paul D., Mitchell, Bree L., Yasui, Yutaka
Heterogeneity in the molecular characteristics of a disease presents a challenge to investigators attempting to identify biomarkers of the disease. Preceding the biomarker discovery effort with...
Mertens, Ann C., Liu, Qi, Neglia, Joseph P., Wasilewski, Karen, Leisenring, Wendy, Armstrong, Gregory T., ...
Background The proportion of pediatric and adolescent cancer patients surviving 5 years has increased during the past four decades. This growing population of survivors remains at risk for disease-...
Computational prediction of human proteins that can be secreted into the bloodstream (2008)
Cui, Juan, Liu, Qi, Puett, David, Xu, Ying
We present a novel computational method for predicting which proteins from highly and abnormally expressed genes in diseased human tissues, such as cancers, can be secreted into the bloodstream,...
Regulatory module network of basic/helix-loop-helix transcription factors in mouse brain (2007)
Li, Jing, Liu, Zijing J, Pan, Yuchun C, Liu, Qi, Fu, Xing, Cooper, Nigel GF, ...
Abstract Background The basic/helix-loop-helix (bHLH) proteins are important components of the transcriptional regulatory network, controlling a variety of biological processes, especially the...
Comparative evaluation of gene-set analysis methods (2007)
Liu, Qi, Dinu, Irina, Adewale, Adeniyi J, Potter, John D, Yasui, Yutaka
Abstract Background Multiple data-analytic methods have been proposed for evaluating gene-expression levels in specific biological pathways, assessing differential expression associated with a binary...
Sun, Jingchun, Sun, Yan, Ding, Guohui, Liu, Qi, Wang, Chuan, He, Youyu, ...
Abstract Background Although many genomic features have been used in the prediction of protein-protein interactions (PPIs), frequently only one is used in a computational method. After realizing the...
Improving gene set analysis of microarray data by SAM-GS (2007)
Dinu, Irina, Potter, John D, Mueller, Thomas, Liu, Qi, Adewale, Adeniyi J, Jhangri, Gian S, ...
Abstract Background Gene-set analysis evaluates the expression of biological pathways, or a priori defined gene sets, rather than that of individual genes, in association with a binary phenotype, and...
Attachment of periodontal fibroblasts to barrier membranes coated with platelet-rich plasma (2007)
Chang, Taeun, Liu, Qi, Marino, Victor, Bartold, Peter Mark
Copyright © 2007 Australian Dental Association
Attachment of periodontal fibroblasts to barrier membranes coated with platelet-rich plasma (2007)
Chang, Taeun, Liu, Qi, Marino, Victor, Bartold, Peter Mark
Copyright © 2007 Australian Dental Association
The Fluctuation Theorem in a Sinai-Billiard Geometry: Predictions and Measurements (2007)
Schmick, Malte, Hasselhuhn, Alexander, Liu, Qi, Ouyang, Qi, Markus, Mario
Oriented Diameter of Graphs with Diameter 3 (2007)
Peter K. Kwok, Qi Liu, Douglas B. West
In 1978, Chvátal and Thomassen proved that every 2-edge-connected graph with diameter 2 has an orientation with diameter at most 6. They also gave general bounds on the smallest value f(d) such that...
Guohui Ding, Jiuhong Kang, Qi Liu, Tieliu Shi, Gang Pei, Yixue Li
The evolution of new gene families subsequent to gene duplication may be coupled to the fluctuation of population and environment variables. Based upon that, we presented a systematic analysis of the...
Guohui Ding, Jiuhong Kang, Qi Liu, Tieliu Shi, Gang Pei, Yixue Li
The evolution of new gene families subsequent to gene duplication may be coupled to the fluctuation of population and environment variables. Based upon that, we presented a systematic analysis of the...
Implications among linkage properties in graphs (2006)
Qi Liu, Douglas B. West, Gexin Yu
Given a graph H with vertices w1,..., wm, a graph G with at least m vertices is H-linked if for every choice of vertices v1,..., vm in G, there is a subdivision of H in G such that vi is the branch...
protein-protein interactions (2005)
Jingchun Sun, Jinlin Xu, Zhen Liu, Qi Liu, Aimin Zhao, Tieliu Shi, ...
Refined phylogenetic profiles method for predicting
Function-based representation of complex geometry and appearance (2005)
In this paper, we introduce a function-based extension of Virtual Reality Modeling Language. In this extension, analytical functions are used for defining geometry and appearance of 3D shapes, as...
Refined phylogenetic profiles method for predicting protein-protein interactions (2005)
Sun, Jingchun, Xu, Jinlin, Liu, Zhen, Liu, Qi, Zhao, Aimin, Shi, Tieliu, ...
Motivation: The increasing availability of complete genome sequences provides excellent opportunity for the further development of tools for functional studies in proteomics. Several experimental...
Refined phylogenetic profiles method for predicting protein-protein interactions (2005)
Sun, Jingchun, Xu, Jinlin, Liu, Zhen, Liu, Qi, Zhao, Aimin, Shi, Tieliu, ...
Motivation: The increasing availability of complete genome sequences provides excellent opportunity for further developing tools for functional studies in proteomics. Several experimental approaches...
The facility layout problem (FLP) is one of the most important and challenging problems in both the operations research and industrial engineering research domains. In FLP research, the...
The facility layout problem (FLP) is one of the most important and challenging problems in both the operations research and industrial engineering research domains. In FLP research, the...
Liu, Qi, Aldrich-Wright, Janice R., Tor, Yitzhak
New and higher yielding synthetic routes to N-protected N-methylpyrrole and N-methylimidazole amino acids are introduced to circumvent difficulties associated with established schemes. Key steps in...
Synthesis of small molecules targeting RNA / (2004)
Thesis (Ph. D.)--University of California, San Diego, 2004.
Jaramillo, David, Liu, Qi, Aldrich-Wright, Janice R., Tor, Yitzhak
New and higher yielding synthetic routes to N-protected N-methylpyrrole and N-methylimidazole amino acids are introduced to circumvent difficulties associated with established schemes. Key steps in...
Quality control of a manufacturing system / (2002)
Thesis (M. Sc. (Mech. & Proc. of Matl.)--Nanyang Technological University, School of Mechanical and Production Engineering, 2002.
Thesis (Ph. D.)--Texas A&M University, 2002.
Sex differences in heritability of cognitive abilities during adolescence / (2001)
Thesis (M.A.)--University of Southern California, 2001.
Design of multiplier and its VLSI implementation /--by Qi Liu. (1999)
Thesis (M.S. in E.E.)--Texas Tech University, 1999.
Chen, Zhongquiang, Liu, Qi, Zhu, Yisheng, Li, Yixue, Xu, Yuhong
Transmembrane proteins play vital roles in living cells. The difficulties in determining the topology of transmembrane protein experimentally and the increasing amino acid sequence data from genome...
Rearrangement of ring C aromatic diterpenoids / (1998)
Thesis (MSc--Chemistry)--University of Auckland, 1998.
Membrane domain formation induced by proteolipid protein in myelination /--by Qi Liu. (1997)
Printout.
Thesis (doctoral)--Universität Hannover, 1995.
Mikrofiche-Ausg.: 2 Mikrofiches : 24x.
Thesis (M.A.)--University of Iowa, 1990.
Error analysis of fast Hartley transform implemented using logarithmic arithmetic / (1992)
Thesis (M.S.)--Kansas State University, 1992.
Research project (M. Ed.)--California University of Pennsylvania, 1992.
Typescript (photocopy).
Typescript.
Liu, Qi, Johnson, Reed F., Leibowitz, Julian L.
Previously, we characterized two host protein binding elements located within the 3′-terminal 166 nucleotides of the mouse hepatitis virus (MHV) genome and assessed their functions in...
Ding, Guohui, Kang, Jiuhong, Liu, Qi, Shi, Tieliu, Pei, Gang, Li, Yixue
The evolution of new gene families subsequent to gene duplication may be coupled to the fluctuation of population and environment variables. Based upon that, we presented a systematic analysis of the...
Liu, Qi, Johnson, Reed F., Leibowitz, Julian L.
Previously, we characterized two host protein binding elements located within the 3′-terminal 166 nucleotides of the mouse hepatitis virus (MHV) genome and assessed their functions in...
Ding, Guohui, Kang, Jiuhong, Liu, Qi, Shi, Tieliu, Pei, Gang, Li, Yixue
The evolution of new gene families subsequent to gene duplication may be coupled to the fluctuation of population and environment variables. Based upon that, we presented a systematic analysis of the...
Improving gene set analysis of microarray data by SAM-GS
Dinu, Irina, Potter, John D, Mueller, Thomas, Liu, Qi, Adewale, Adeniyi J, Jhangri, Gian S, ...
Sun, Jingchun, Sun, Yan, Ding, Guohui, Liu, Qi, Wang, Chuan, He, Youyu, ...
Comparative evaluation of gene-set analysis methods
Liu, Qi, Dinu, Irina, Adewale, Adeniyi J, Potter, John D, Yasui, Yutaka
Regulatory module network of basic/helix-loop-helix transcription factors in mouse brain
Li, Jing, Liu, Zijing J, Pan, Yuchun C, Liu, Qi, Fu, Xing, Cooper, Nigel GF, ...
A comprehensive regulatory module network of 15 bHLH transcription factors over 150 target genes in mouse brain has been constructed.
Dinu, Irina, Liu, Qi, Potter, John D., Adewale, Adeniyi J., Jhangri, Gian S., Mueller, Thomas, ...
Gene-set analysis of microarray data evaluates biological pathways, or gene sets, for their differential expression by a phenotype of interest. In contrast to the analysis of individual genes,...
Analyses of domains and domain fusions in human proto-oncogenes
Liu, Qi, Huang, Jinling, Liu, Huiqing, Wan, Ping, Ye, Xiuzi, Xu, Ying
Liu, Qi, Cheng, Lily I., Yi, Liang, Zhu, Nannan, Wood, Adam, Changpriroa, Cattlena May, ...
Nicotinamide dinucleotide phosphate oxidase-deficient (p47phox−/−) mice are a model of human chronic granulomatous disease; these mice are prone to develop systemic infections and inflammatory...
COMPARISON OF CdS AND ZnS THIN FILMS PREPARED BY CHEMICAL BATH DEPOSITION
In this paper, we reported a comparative study of process and structural characterization of cadmium sulfide (CdS) and zinc sulfide (ZnS) thin films by chemical bath deposition (CBD) technique. Their...
Mertens, Ann C., Liu, Qi, Neglia, Joseph P., Wasilewski, Karen, Leisenring, Wendy, Armstrong, Gregory T., ...
Garmey, Edward G., Liu, Qi, Sklar, Charles A., Meacham, Lillian R., Mertens, Ann C., Stovall, Marilyn A., ...
Computational prediction of human proteins that can be secreted into the bloodstream
Cui, Juan, Liu, Qi, Puett, David, Xu, Ying
We present a novel computational method for predicting which proteins from highly and abnormally expressed genes in diseased human tissues, such as cancers, can be secreted into the bloodstream,...