Array-based genotyping in S.cerevisiae using semi-supervised clustering (2009)
Bourgon, Richard, Mancera, Eugenio, Brozzi, Alessandro, Steinmetz, Lars M., Huber, Wolfgang
Motivation: Microarrays provide an accurate and cost-effective method for genotyping large numbers of individuals at high resolution. The resulting data permit the identification of loci at which...
Li, Xiao-Yong, MacArthur, Stewart, Bourgon, Richard, Nix, David, Pollard, Daniel A., Iyer, Venky N., ...
Xiao-yong Li, Stewart MacArthur, Richard Bourgon, David Nix, Daniel A. Pollard, Venky N. Iyer, ...
Identifying the genomic regions bound by sequence-specific regulatory factors is central both to deciphering the complex DNA cis-regulatory code that controls transcription in metazoans and to...
CS294-2 Markov Chain Monte Carlo: Foundations Applications Fall 2002 (2007)
Lecturer Alistair, Sinclair Scribes, Richard Bourgon, Bhaskara Marthi
n e. This upper bound is in fact tight, up to the lower order term, and we now sketch why that's true: 4-1 We can identify a speci c event with a probability under p x substantially dierent from...
Genome-wide analysis of Polycomb targets in Drosophila (2006)
Schwartz, Yuri B., Kahn, Tatyana G., Nix, David A., Li, Xiao-Yong, Bourgon, Richard, Biggin, Mark, ...
Polycomb Group (PcG) complexes are multiprotein assemblages that bind to chromatin and establish chromatin states leading to epigenetic silencing. PcG proteins regulate homeotic genes in flies and...
Bourgon, Richard, Delorenzi, Mauro, Sargeant, Tobias, Hodder, Anthony N., Crabb, Brendan S., Speed, Terence P.
Plasmodium falciparum is the parasite responsible for the most acute form of malaria in humans. Recently, the serine repeat antigen (SERA) in P. falciparum has attracted attention as a potential...
Bourgon, Richard, Delorenzi, Mauro, Sargeant, Tobias, Hodder, Anthony N., Crabb, Brendan S., Speed, Terence P.
Plasmodium falciparum is the parasite responsible for the most acute form of malaria in humans. Recently, the serine repeat antigen (SERA) in P. falciparum has attracted attention as a potential...
Bourgon, Richard, Delorenzi, Mauro, Sargeant, Tobias, Hodder, Anthony N., Crabb, Brendan S., Speed, Terence P.
Plasmodium falciparum is the parasite responsible for the most acute form of malaria in humans. Recently, the serine repeat antigen (SERA) in P. falciparum has attracted attention as a potential...
Transcription Factors Bind Thousands of Active and Inactive Regions in the Drosophila Blastoderm
Li, Xiao-yong, MacArthur, Stewart, Bourgon, Richard, Nix, David, Pollard, Daniel A, Iyer, Venky N, ...
Identifying the genomic regions bound by sequence-specific regulatory factors is central both to deciphering the complex DNA cis-regulatory code that controls transcription in metazoans and to...
Li, Xiao-yong, MacArthur, Stewart, Bourgon, Richard, Nix, David, Pollard, Daniel A, Iyer, Venky N, ...
Array-based genotyping in S.cerevisiae using semi-supervised clustering
Bourgon, Richard, Mancera, Eugenio, Brozzi, Alessandro, Steinmetz, Lars M., Huber, Wolfgang
Motivation: Microarrays provide an accurate and cost-effective method for genotyping large numbers of individuals at high resolution. The resulting data permit the identification of loci at which...
Genome-wide allele- and strand-specific expression profiling
Gagneur, Julien, Sinha, Himanshu, Perocchi, Fabiana, Bourgon, Richard, Huber, Wolfgang, Steinmetz, Lars M
Recent reports have shown that most of the genome is transcribed and that transcription frequently occurs concurrently on both DNA strands. In diploid genomes, the expression level of each allele...