S. Agrawal

Publication List Details

Period

1967 - 2008

Number

96

Co-Authors

Immunobiology of human imunodeficiency virus infection (2007)

Tripathi, P., Agrawal, S.

After the discovery of human immunodeficiency virus (HIV) and its role in the causation of most devastating epidemic acquired immune deficiency syndrome (AIDS), there has been an increasing trend to...

The F158V polymorphism in Fc gamma RIIIA shows disparate associations with rheumatoid arthritis in two genetically distinct populations (2002)

Milicic, A, Misra, R, Agrawal, S, Aggarwal, A, Brown, MA, Wordsworth, BP

Objectives: To investigate the association of the FcgammaRIIIA gene with rheumatoid arthritis (RA) in two genetically distinct groups: a white group from the United Kingdom and a northern Indian...

Antisense oligodeoxynucleotide phosphorothioate complementary to Gag mRNA blocks replication of human immunodeficiency virus type 1 in human peripheral blood cells.

Lisziewicz, J, Sun, D, Weichold, F F, Thierry, A R, Lusso, P, Tang, J, ...

Gene-expression modulator 91 (GEM91) is a 25-nt antisense oligodeoxynucleotide phosphorothioate complementary to the Gag mRNA of human immunodeficiency virus type 1 (HIV-1). Cellular uptake and...

Long-term treatment of human immunodeficiency virus-infected cells with antisense oligonucleotide phosphorothioates.

Lisziewicz, J, Sun, D, Metelev, V, Zamecnik, P, Gallo, R C, Agrawal, S

The antiviral activity of antisense oligodeoxynucleotide phosphorothioates complementary to the tat gene, the gag mRNA, and the rev mRNA were studied in a long-term infection model. Three antisense...

Antimalarial activities of oligodeoxynucleotide phosphorothioates in chloroquine-resistant Plasmodium falciparum.

Rapaport, E, Misiura, K, Agrawal, S, Zamecnik, P

Synthetic oligonucleotides and their chemical modifications have been shown to inhibit viral and cellular gene expression by sequence-specific antisense hybridization to target mRNAs. We now report...

Specific inhibition of human immunodeficiency virus type 1 replication by antisense oligonucleotides: an in vitro model for treatment.

Lisziewicz, J, Sun, D, Klotman, M, Agrawal, S, Zamecnik, P, Gallo, R

We have developed a culture system, simulating in vivo conditions of human immunodeficiency virus type 1 (HIV-1) infection, to evaluate the long-term efficacy of antisense oligonucleotide treatment....

Pharmacokinetics, biodistribution, and stability of oligodeoxynucleotide phosphorothioates in mice.

Agrawal, S, Temsamani, J, Tang, J Y

We describe preliminary studies of the pharmacokinetics, biodistribution, and excretion of an oligodeoxy-nucleotide phosphorothioate ([S]oligonucleotide) in mice. After either intravenous or...

Site-specific excision from RNA by RNase H and mixed-phosphate-backbone oligodeoxynucleotides.

Agrawal, S, Mayrand, S H, Zamecnik, P C, Pederson, T

Oligodeoxynucleotides containing phosphodiester or modified internucleoside linkages were investigated with respect to their ability to be acted on by ribonuclease H activities present in a HeLa cell...

Inhibition of influenza virus replication by phosphorothioate oligodeoxynucleotides.

Leiter, J M, Agrawal, S, Palese, P, Zamecnik, P C

Oligodeoxynucleotides (ODNs) were synthesized and tested for their antiviral activity against influenza viruses. ODNs corresponded to the polymerase PB1 gene of either influenza A/WSN/33 virus or...

The In Vitro-Synthesized RNA from a cDNA Clone of Hepatitis E Virus Is Infectious

Panda, S. K., Ansari, I. H., Durgapal, H., Agrawal, S., Jameel, S.

Hepatitis E virus (HEV) is an important etiological agent of epidemic and sporadic hepatitis, which is endemic to the Indian subcontinent and prevalent in most of the developing parts of the world....

Mixed backbone antisense oligonucleotides: design, biochemical and biological properties of oligonucleotides containing 2'-5'-ribo- and 3'-5'-deoxyribonucleotide segments.

Kandimalla, E R, Manning, A, Zhao, Q, Shaw, D R, Byrn, R A, Sasisekharan, V, ...

We have designed and synthesized mixed backbone oligonucleotides (MBOs) containing 2'-5'-ribo- and 3'-5'-deoxyribonucleotide segments. Thermal melting studies of the phosphodiester MBOs (three...

Sequence-specific RNase H cleavage of gag mRNA from HIV-1 infected cells by an antisense oligonucleotide in vitro.

Veal, G J, Agrawal, S, Byrn, R A

We have used a ribonuclease protection assay to investigate RNase H cleavage of HIV-1 mRNA mediated by phosphorothioate antisense oligonucleotides complementary to the gag region of the HIV-1 genome...

Inhibition of human immunodeficiency virus replication by antisense oligodeoxynucleotides.

Goodchild, J, Agrawal, S, Civeira, M P, Sarin, P S, Sun, D, Zamecnik, P C

Twenty different target sites within human immunodeficiency virus (HIV) RNA were selected for studies of inhibition of HIV replication by antisense oligonucleotides. Target sites were selected based...

Oligodeoxynucleoside phosphoramidates and phosphorothioates as inhibitors of human immunodeficiency virus.

Agrawal, S, Goodchild, J, Civeira, M P, Thornton, A H, Sarin, P S, Zamecnik, P C

Modified oligodeoxynucleotides complementary to RNA of human immunodeficiency virus 1 (HIV-1) were tested for their ability to inhibit virally induced syncytium formation and expression of viral p24...

Inhibition of acquired immunodeficiency syndrome virus by oligodeoxynucleoside methylphosphonates.

Sarin, P S, Agrawal, S, Civeira, M P, Goodchild, J, Ikeuchi, T, Zamecnik, P C

Antisense oligodeoxynucleotides containing internucleoside methylphosphonate linkages were examined for their ability to inhibit human immunodeficiency virus (HIV)-induced syncytium formation and...

Detection of nucleic acid hybridization by nonradiative fluorescence resonance energy transfer.

Cardullo, R A, Agrawal, S, Flores, C, Zamecnik, P C, Wolf, D E

Three approaches were used to study hybridization of complementary oligodeoxynucleotides by nonradiative fluorescence resonance energy transfer. (i) Fluorescein (donor) and rhodamine (acceptor) were...

Inhibition of human immunodeficiency virus in early infected and chronically infected cells by antisense oligodeoxynucleotides and their phosphorothioate analogues.

Agrawal, S, Ikeuchi, T, Sun, D, Sarin, P S, Konopka, A, Maizel, J, ...

Antisense oligodeoxynucleotides, both the phosphorothioate analogues and unmodified oligomers of the same sequence, inhibit replication and expression of human immunodeficiency virus already growing...

Single strand targeted triplex-formation. Destabilization of guanine quadruplex structures by foldback triplex-forming oligonucleotides.

Kandimalla, E R, Agrawal, S

Oligonucleotides that can hybridize to single-stranded complementary polypurine nucleic acid targets by Watson-Crick base pairing as well as by Hoogsteen base pairing, referred to here as foldback...

Sequence identity of the n-1 product of a synthetic oligonucleotide.

Temsamani, J, Kubert, M, Agrawal, S

After synthesis and purification of an oligonucleotide, the final product usually contains a low level of n-1 congeneric species. We have sequenced the n-1 population of a 25mer phosphodiester...

Design, biochemical, biophysical and biological properties of cooperative antisense oligonucleotides.

Kandimalla, E R, Manning, A, Lathan, C, Byrn, R A, Agrawal, S

Short oligonucleotides that can bind to adjacent sites on target mRNA sequences are designed and evaluated for their binding affinity and biological activity. Sequence-specific binding of short...

Single strand targeted triplex formation: targeting purine-pyrimidine mixed sequences using abasic linkers.

Kandimalla, E R, Manning, A N, Venkataraman, G, Sasisekharan, V, Agrawal, S

Foldback triplex-forming oligonucleotides (FTFOs) that contain an abasic linker, [2-(4-aminobutyr-1-yl)-1,3-propanediol] (APD linker), in the Hoogsteen domain against pyrimidine bases of a C:G and a...

Self-stabilized antisense oligodeoxynucleotide phosphorothioates: properties and anti-HIV activity.

Tang, J Y, Temsamani, J, Agrawal, S

A new class of oligodeoxyribonucleotides has been designed, referred to here as 'self-stabilized' oligonucleotides. These oligonucleotides have hairpin loop structures at their 3' ends, and show...

Efficient methods for attaching non-radioactive labels to the 5' ends of synthetic oligodeoxyribonucleotides.

Agrawal, S, Christodoulou, C, Gait, M J

The syntheses are described of two types of linker molecule useful for the specific attachment of non-radioactive labels such as biotin and fluorophores to the 5' terminus of synthetic...