A Physical, Makoto Hirosawa, Takakazu Kaneko, Satoshi Tabata
Figure 1: Home page of CyanoBase of a single organism. The sequence data we gained have been registered in public databases and published in journals. However, the information available through the...
Construction of a consensus linkage map for red clover (Trifolium pratenseL.) (2009)
Isobe, Sachiko, Kölliker, Roland, Hisano, Hiroshi, Sasamoto, Shigemi, Wada, Tshyuko, Klimenko, Irina, ...
Abstract Background Red clover ( Trifolium pratense L.) is a major forage legume that has a strong self-incompatibility system and exhibits high genetic diversity within populations. For several crop...
Bertioli, David J, Moretzsohn, Marcio C, Madsen, Lene H, Sandal, Niels, Leal-Bertioli, Soraya CM, Guimarães, Patricia M, ...
Abstract Background Most agriculturally important legumes fall within two sub-clades of the Papilionoid legumes: the Phaseoloids and Galegoids, which diverged about 50 Mya. The Phaseoloids are mostly...
Ramos Escribano, Javier, Matamoros Galindo, Manuel Antonio, Naya, Loreto, James, Euan K., Rouhier, Nicolas, Sato, Shusei, ...
The definitive version is available at: http://www3.interscience.wiley.com/journal/118538954/home
Okamoto, Satoru, Ohnishi, Erika, Sato, Shusei, Takahashi, Hirokazu, Nakazono, Mikio, Tabata, Satoshi, ...
Host legumes control root nodule numbers by sensing external and internal cues. A major external cue is soil nitrate, whereas a feedback regulatory system in which earlier formed nodules suppress...
Welham, Tracey, Pike, Jodie, Horst, Irmtraud, Flemetakis, Emmanouil, Katinakis, Panagiotis, Kaneko, Takakazu, ...
Neutral/alkaline invertases are a subgroup, confined to plants and cyanobacteria, of a diverse family of enzymes. A family of seven closely-related genes, LjINV1–LjINV7, is described here and their...
High-density Integrated Linkage Map Based on SSR Markers in Soybean (2009)
Hwang, Tae-Young, Sayama, Takashi, Takahashi, Masakazu, Takada, Yoshitake, Nakamoto, Yumi, Funatsuki, Hideyuki, ...
A well-saturated molecular linkage map is a prerequisite for modern plant breeding. Several genetic maps have been developed for soybean with various types of molecular markers. Simple sequence...
A snapshot of the emerging tomato genome sequence (2009)
Mueller, Lukas, Klein Lankhorst, René, Tanksley, Steven D., Giovannoni, James J., White, Ruth, Vrebalov, Julia, ...
The genome of tomato (Solanum lycopersicum L.) is being sequenced by an international consortium of 10 countries (Korea, China, the United Kingdom, India, the Netherlands, France, Japan, Spain,...
The genome of the versatile nitrogen fixer Azorhizobium caulinodansORS571 (2008)
Lee, Kyung-Bum, De Backer, Philippe, Aono, Toshihiro, Liu, Chi-Te, Suzuki, Shino, Suzuki, Tadahiro, ...
Abstract Background Biological nitrogen fixation is a prokaryotic process that plays an essential role in the global nitrogen cycle. Azorhizobium caulinodans ORS571 has the dual capacity to fix...
Complete Genomic Structure of the Bloom-forming Toxic (2008)
Midori Katoh, Naomi Nakazaki, Shinobu Nakayama, Manabu Yamada, Satoshi Tabata
The nucleotide sequence of the complete genome of a cyanobacterium, Microcystis aeruginosa NIES-843, was determined. The genome of M. aeruginosa is a single, circular chromosome of 5 842 795 base...
Ariizumi, Tohru, Kawanabe, Takahiro, Hatakeyama, Katsunori, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, ...
A male-sterile mutant of Arabidopsis thaliana, in which filament elongation was defective although pollen fertility was normal, was isolated by means of T-DNA tagging. Transmission electron...
Yoshida, Kazuko, Iwasaka, Rieko, Kaneko, Takakazu, Sato, Shusei, Tabata, Satoshi, Sakuta, Masaaki
Leguminous plants have many paralogous genes encoding enzymes involved in the flavonoid biosynthetic pathway. Duplicate genes are predicted to contribute to the production of various flavonoid...
Shimoda, Yoshikazu, Mitsui, Hisayuki, Kamimatsuse, Hiroko, Minamisawa, Kiwamu, Nishiyama, Eri, Ohtsubo, Yoshiyuki, ...
Rhizobia are nitrogen-fixing soil bacteria that establish endosymbiosis with some leguminous plants. The completion of several rhizobial genome sequences provides opportunities for genome-wide...
A High-density Linkage Map of Lotus japonicus Based on AFLP and SSR Markers (2008)
Wang, Xinwang, Sato, Shusei, Tabata, Satoshi, Kawasaki, Shinji
A collection of 94 F6 individuals derived from crosses between Lotus japonicus, Gifu B-129 (G) and Miyakojima MG-20 (M) were used for mapping. By using the HEGS running system, 427 EcoRI/MseI primer...
Wei, Min, Yokoyama, Tadashi, Minamisawa, Kiwamu, Mitsui, Hisayuki, Itakura, Manabu, Kaneko, Takakazu, ...
Initial interaction between rhizobia and legumes actually starts via encounters of both partners in the rhizosphere. In this study, the global expression profiles of Bradyrhizobium japonicum USDA 110...
Genome Structure of the Legume, Lotus japonicus (2008)
Sato, Shusei, Nakamura, Yasukazu, Kaneko, Takakazu, Asamizu, Erika, Kato, Tomohiko, Nakao, Mitsuteru, ...
The legume Lotus japonicus has been widely used as a model system to investigate the genetic background of legume-specific phenomena such as symbiotic nitrogen fixation. Here, we report structural...
Shimoda, Yoshikazu, Shinpo, Sayaka, Kohara, Mitsuyo, Nakamura, Yasukazu, Tabata, Satoshi, Sato, Shusei
Global viewing of protein–protein interactions (PPIs) is a useful way to assign biological roles to large numbers of proteins predicted by complete genome sequence. Here, we systematically analyzed...
CyanoBase, a www database containing the complete nucleotide sequence of the genome of (2007)
Synechocystis Sp, Yasukazu Nakamura, Takakazu Kaneko, Makoto Hirosawa, Nobuyuki Miyajima, Satoshi Tabata
CyanoBase (http://www.kazusa.or.jp/cyano/ ) is a database containing genomic information on the cyanobacterium Synechocystis sp. strain PCC6803. It furnishes an annotation to each of the 3168 protein...
Annotation and Presentation Systems for Arabidopsis (2007)
Yasukazu Nakamura, Shusei Sato, Satoshi Tabata
To understand the entire genetic system in higher plants, we initiated large-scale sequencing of the Arabidopsis thaliana genome. We are taking part in sequencing of the entire bottom arm and...
Yasukazu Nakamura, Satoshi Tabata
Arabidopsis thaliana is a small flowering plant that is widely used by plant science researchers as a model organism to study many aspects of plant biology. The genome size is ca. 130-megabase and...
Shimada, Norimoto, Sato, Shusei, Akashi, Tomoyoshi, Nakamura, Yasukazu, Tabata, Satoshi, Ayabe, Shin-ichi, ...
A model legume Lotus japonicus (Regel) K. Larsen is one of the subjects of genome sequencing and functional genomics programs. In the course of targeted approaches to the legume genomics, we analyzed...
Rubio, Maria C., Becana Ausejo, Manuel, Sato, Shusei, James, Euan K., Tabata, Satoshi, Spaink, Herman P.
The definitive version is available at http://apsjournals.apsnet.org/loi/mpmi
Iwama, Ayako, Yamashino, Takafumi, Tanaka, Yasushi, Sakakibara, Hitoshi, Kakimoto, Tatsuo, Sato, Shusei, ...
The Arabidopsis thaliana genome encodes a small family of histidine (His) protein kinases, some of which have redundant functions as ethylene receptors, whereas others serve as cytokinin receptors....
Ramos, Javier, Clemente, María Rebeca, Naya, Loreto, Loscos, Jorge, Pérez Rontomé, Mari Carmen, Sato, Shusei, ...
The biosynthesis of phytochelatins (PCs) and homophytochelatins (hPCs) has been studied in nodulated plants of the model legume Lotus (Lotus japonicus). In the first 6-24 h of treatment with cadmium...
Yoshikazu Shimoda, Sayaka Shinpo, Mitsuyo Kohara, Yasukazu Nakamura, Satoshi Tabata, Shusei Sato
Global viewing of protein–protein interactions (PPIs) is a useful way to assign biological roles to large numbers of proteins predicted by complete genome sequence. Here, we systematically analyzed...
Sachiko Isobe, Akihiro Nakaya, Satoshi Tabata
In order to reveal quantitative trait loci (QTL) interactions and the relationship between various interactions in complex traits, we have developed a new QTL mapping approach, named genotype matrix...
Characterization of the Soybean Genome Using EST-derived Microsatellite Markers (2007)
Hisano, Hiroshi, Sato, Shusei, Isobe, Sachiko, Sasamoto, Shigemi, Wada, Tsuyuko, Matsuno, Ai, ...
We generated a high-density genetic linkage map of soybean using expressed sequence tag (EST)-derived microsatellite markers. A total of 6920 primer pairs (10.9%) were designed to amplify simple...
Kaneko, Takakazu, Nakajima, Nobuyoshi, Okamoto, Shinobu, Suzuki, Iwane, Tanabe, Yuuhiko, Tamaoki, Masanori, ...
The nucleotide sequence of the complete genome of a cyanobacterium, Microcystis aeruginosa NIES-843, was determined. The genome of M. aeruginosa is a single, circular chromosome of 5 842 795 base...
Isobe, Sachiko, Nakaya, Akihiro, Tabata, Satoshi
In order to reveal quantitative trait loci (QTL) interactions and the relationship between various interactions in complex traits, we have developed a new QTL mapping approach, named genotype matrix...
A Large-scale Protein protein Interaction Analysis in Synechocystis sp. PCC6803 (2007)
Sato, Shusei, Shimoda, Yoshikazu, Muraki, Akiko, Kohara, Mitsuyo, Nakamura, Yasukazu, Tabata, Satoshi
Protein–protein interactions (PPIs) play crucial roles in protein function for a variety of biological processes. Data from large-scale PPI screening has contributed to understanding the function...
Sugiyama, Akifumi, Shitan, Nobukazu, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Yazaki, Kazufumi
ATP-binding cassette (ABC) proteins constitute a large family in plants with more than 120 members each in Arabidopsis and rice, and have various functions including the transport of auxin and...
Biosynthesis of Ascorbic Acid in Legume Root Nodules (2006)
Matamoros, Manuel Antonio, Loscos, Jorge, Coronado, María José, Ramos, Javier, Sato, Shusei, Sánchez-Testillano, Pilar, ...
10 pages, 6 figures.-- This work is part of the Ph.D. thesis of J.L. (supervised by M.A.M. and M.B.).
Lukas A. Mueller, Steven D. Tanksley, Jim J. Giovannoni, Joyce Van Eck, Stephen Stack, Doil Choi, ...
The genome of tomato (Solanum lycopersicum) is being sequenced by an international consortium of 10 countries (Korea, China, the United Kingdom, India, The Netherlands, France, Japan, Spain, Italy...
Sandal, Niels, Petersen, Thomas Rorby, Murray, Jeremy, Umehara, Yosuke, Karas, Bogumil, Yano, Koji, ...
Development of molecular tools for the analysis of the plant genetic contribution to rhizobial and mycorrhizal symbiosis has provided major advances in our understanding of plant-microbe...
Gene Trapping in Arabidopsis Reveals Genes Involved in Vascular Development (2006)
Nagawa, Shingo, Sawa, Shinichirou, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Fukuda, Hiroo
The procambium is made up of stem cells that give rise to various vascular cells in plants. To understand the molecular nature of procambium cells, we tried to identify genes that characterize...
Mai, Ha Thu, Nomura, Mika, Takegawa, Kaoru, Asamizu, Erika, Sato, Syusei, Kato, Tomohiko, ...
We identified a Sed5-like clone LjSYP32-1 which contributes to nodule tissue formation and plant growth in Lotus japonicus. In the L. japonicus expressed sequence tag (EST) clone databases of Kazusa...
Mai, Ha Thu, Nomura, Mika, Takegawa, Kaoru, Asamizu, Erika, Sato, Syusei, Kato, Tomohiko, ...
We identified a Sed5-like clone LjSYP32-1which contributes to nodule tissue formation and plant growth in Lotus japonicus. In L. japonicus EST clone databases of Kazusa DNA Research Institute,...
Gene trapping in Arabidopsis reveals genes involved in vascular development (2006)
Nagawa, Shingo, Sawa, Shinichirou, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Fukuda, Hiroo
The procambium is made up of stem cells that give rise to various vascular cells in plants. To understand the molecular nature of procambium cells, we tried to identify genes that characterize...
Comprehensive Structural Analysis of the Genome of Red Clover (Trifolium pratense L.) (2006)
Sato, Shusei, Isobe, Sachiko, Asamizu, Erika, Ohmido, Nobuko, Kataoka, Ryohei, Nakamura, Yasukazu, ...
With the aim of establishing the basic knowledge and resources needed for applied genetics, we investigated the genome structure of red clover Trifolium pratense L. by a combination of cytological,...
Sugiyama, Akifumi, Shitan, Nobukazu, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Yazaki, Kazufumi
ATP-binding cassette (ABC) proteins constitute a large family in plants with more than 120 members each in Arabidopsis and rice, and have various functions including the transport of auxin and...
Kistner, Catherine, Winzer, Thilo, Pitzschke, Andrea, Mulder, Lonneke, Sato, Shusei, Kaneko, Takakazu, ...
A combined genetic and transcriptome analysis was performed to study the molecular basis of the arbuscular mycorrhiza (AM) symbiosis. By testing the AM phenotype of nodulation-impaired mutants and...
Promoter trapping in Lotus japonicus reveals novel root and nodule GUS expression domains (2005)
Buzas, Diana Mihaela, Lohar, Dasharath, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Vickers, Claudia Estelle, ...
Agrobacterium-based transformation was used to introduce a promoter-less glucuronidase uidA gene (beta-glucuronidase; GUS) into Lotus japonicus. Transgenic plants were screened for GUS activation at...
Promoter trapping in Lotus japonicus reveals novel root and nodule GUS expression domains (2005)
Buzas, Diana Mihaela, Lohar, Dasharath, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Vickers, Claudia Estelle, ...
Agrobacterium-based transformation was used to introduce a promoter-less glucuronidase uidA gene (beta-glucuronidase; GUS) into Lotus japonicus. Transgenic plants were screened for GUS activation at...
Lukas A. Mueller, Steven D. Tanksley, Jim J. Giovannoni, Joyce Van Eck, Stephen Stack, Doil Choi, ...
The genome of tomato (Solanum lycopersicum) is being sequenced by an international consortium of 10 countries (Korea, China, the United Kingdom, India, The Netherlands, France, Japan, Spain, Italy...
Shimada, Norimoto, Sasaki, Ryohsuke, Sato, Shusei, Kaneko, Takakazu, Tabata, Satoshi, Aoki, Toshio, ...
Dihydroflavonol 4-reductase (DFR) is the first committed enzyme of the anthocyanin and condensed tannin pathways. Several DFR cDNAs have been cloned, and different specificities of DFR isozymes in...
Shimoda, Yoshikazu, Nagata, Maki, Suzuki, Akihiro, Abe, Mikiko, Sato, Shusei, Kato, Tomohiko, ...
We characterized the expression profiles of LjHb1 and LjHb2, non-symbiotic hemoglobin (non-sym-Hb) genes of Lotus japonicus. Although LjHb1 and LjHb2 showed 77% homology in their cDNA...
Shimoda, Yoshikazu, Nagata, Maki, Suzuki, Akihiro, Abe, Mikiko, Sato, Shusei, Kato, Tomohiko, ...
We characterized the expression profiles of LjHb1 and LjHb2, nonsymbiotic hemoglobin (nonsym-Hb) genes of Lotus japonicus. Although LjHb1 and LjHb2 showed 77% homology in their cDNA sequences, LjHb2...
Promoter Trapping in Lotus japonicus Reveals Novel Root and Nodule GUS Expression Domains (2005)
Buzas, Diana Mihaela, Lohar, Dasharath, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Vickers, Claudia Estelle, ...
Agrobacterium-based transformation was used to introduce a promoter-less glucuronidase uidA gene (β-glucuronidase; GUS) into Lotus japonicus. Transgenic plants were screened for GUS activation at...
Okajima, Koji, Yoshihara, Shizue, Fukushima, Yoshimasa, Geng, Xiaoxing, Katayama, Mitsunori, Higashi, Shoichi, ...
BLUF (a sensor of Blue-Light Using FAD) is a novel putative photoreceptor domain that is found in many bacteria and some eukaryotic algae. As found on genome analysis, certain cyanobacteria have BLUF...
Shimada, Norimoto, Sasaki, Ryohsuke, Sato, Shusei, Kaneko, Takakazu, Tabata, Satoshi, Aoki, Toshio, ...
Dihydroflavonol 4-reductase (DFR) is the first committed enzyme of the anthocyanin and condensed tannin pathways. Several DFR cDNAs have been cloned, and different specificities of DFR isozymes in...
Lotus burttii Takes a Position of the Third Corner in the Lotus Molecular Genetics Triangle (2005)
Kawaguchi, Masayoshi, Pedrosa-Harand, Andrea, Yano, Koji, Hayashi, Makoto, Murooka, Yoshikatsu, Saito, Katsuharu, ...
In order to consolidate molecular genetic system in Lotus japonicus and to further access the biological diversity in Lotea, we introduce here Lotus burttii B-303 derived from West Pakistan as the...
Comprehensive Structural Analysis of the Genome of Red Clover (Trifolium pratense L.) (2005)
Sato, Shusei, Isobe, Sachiko, Asamizu, Erika, Ohmido, Nobuko, Kataoka, Ryohei, Nakamura, Yasukazu, ...
With the aim of establishing the basic knowledge and resources needed for applied genetics, we investigated the genome structure of red clover Trifolium pratense L. by a combination of cytological,...
Promoter trapping in Lotus japonicus reveals novel root and nodule GUS expression domains (2005)
Buzas, Diana Mihaela, Lohar, Dasharath, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Vickers, Claudia Estelle, ...
Agrobacterium-based transformation was used to introduce a promoter-less glucuronidase uidA gene (&bgr;-glucuronidase; GUS) into Lotus japonicus. Transgenic plants were screened for GUS activation at...
Shimada, Norimoto, Sasaki, Ryohsuke, Sato, Shusei, Kaneko, Takakazu, Tabata, Satoshi, Aoki, Toshio, ...
Dihydroflavonol 4-reductase (DFR) is the first committed enzyme of the anthocyanin and condensed tannin pathways. Several DFR cDNAs have been cloned, and different specificities of DFR isozymes in...
Shimoda, Yoshikazu, Nagata, Maki, Suzuki, Akihiro, Abe, Mikiko, Sato, Shusei, Kato, Tomohiko, ...
We characterized the expression profiles of LjHb1 and LjHb2, nonsymbiotic hemoglobin (nonsym-Hb) genes of Lotus japonicus. Although LjHb1 and LjHb2 showed 77% homology in their cDNA sequences, LjHb2...
Promoter Trapping in Lotus japonicus Reveals Novel Root and Nodule GUS Expression Domains (2005)
Buzas, Diana Mihaela, Lohar, Dasharath, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Vickers, Claudia Estelle, ...
Agrobacterium-based transformation was used to introduce a promoter-less glucuronidase uidA gene (β-glucuronidase; GUS) into Lotus japonicus. Transgenic plants were screened for GUS activation at...
Kouchi, Hiroshi, Shimomura, Kenshiro, Hata, Shingo, Hirota, Atsuko, Wu, Guo-Jiang, Kumagai, Hirotaka, ...
Gene expression profiles during early stages of formation of symbiotic nitrogen-fixing nodules in a model legume Lotus japonicus were analyzed by means of a cDNA array of 18,144 non-redundant...
Obayashi, Takeshi, Okegawa, Takashi, Sasaki-Sekimoto, Yuko, Shimada, Hiroshi, Masuda, Tatsuru, Asamizu, Erika, ...
The distinctive features of plant organs are primarily determined by organ-specific gene expression. We analyzed the expression specificity of 8809 genes in 7 organs of Arabidopsis using a cDNA...
Matamoros Galindo, Manuel Antonio, Clemente, María R., Sato, Shusei, Asamizu, Erika, Tabata, Satoshi, Ramos, Javier, ...
The definitive version is available at: http://apsjournals.apsnet.org/loi/mpmi
Kato, Tomohiko, Sato, Shusei, Nakamura, Yasukazu, Kaneko, Takakazu, Asamizu, Erika, Tabata, Satoshi
We determined the nucleotide sequences of 64 TAC (transformation-competent artificial chromosome) clones selected from genomic libraries of Lotus japonicus accession Miyakojima MG-20 based on the...
Nanjo, Tokihiko, Fujita, Miki, Seki, Motoaki, Kato, Tomohiko, Tabata, Satoshi, Shinozaki, Kazuo
The toxicity of proline (Pro) to plant growth has raised questions despite its protective functions in response to environmental stresses. To evaluate Pro toxicity, we isolated an Arabidopsis...
Masuda, Tatsuru, Fusada, Naoki, Oosawa, Naoki, Takamatsu, Kenichi, Yamamoto, Yoshiharu Y., Ohto, Masaaki, ...
NADPH:protochlorophyllide oxidoreductase (POR) catalyzes the light-dependent reduction of protochlorophyllide. To elucidate the physiological function of three differentially regulated POR isoforms...
Yamashino, Takafumi, Matsushika, Akinori, Fujimori, Toru, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, ...
APRR1 (ARABIDPSIS PSUEDO-RESPONSE REGULATOR 1) (or TOC1, TIMING OF CAB EXPRESSION 1) is believed to be a crucial component of biological clocks of Arabidopsis thaliana. Nevertheless, its molecular...
Morimoto, Kozo, Sato, Shusei, Tabata, Satoshi, Nakai, Masato
IscA homologues are involved in iron-sulfur cluster biosynthesis. In the non-nitrogen-fixing cyanobacterium Synechocystis PCC 6803, there are two IscA homologues, SLR1417 and SLR1565 (designated...
Kaneko, Takakazu, Asamizu, Erika, Kato, Tomohiko, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi
A total of sixty-two clones were selected from a TAC (transformation-competent artificial chromosome) genomic library of the Lotus japonicus accession MG-20 based on the sequence information of...
Asamizu, Erika, Kato, Tomohiko, Sato, Shusei, Nakamura, Yasukazu, Kaneko, Takakazu, Tabata, Satoshi
Using the sequence information of expressed sequences tags (ESTs), cDNAs and genes from Lotus japonicus and other legumes, 73 TAC (transformation-competent arti.cial chromosomes) clones were selected...
Nakamura, Yasukazu, Kaneko, Takakazu, Sato, Shusei, Mimuro, Mamoru, Miyashita, Hideaki, Tsuchiya, Tohru, ...
The nucleotide sequence of the entire genome of a cyanobacterium Gloeobacter violaceus PCC 7421 was determined. The genome of G. violaceus was a single circular chromosome 4,659,019 bp long with an...
Nakamura, Yasukazu, Kaneko, Takakazu, Sato, Shusei, Mimuro, Mamoru, Miyashita, Hideaki, Tsuchiya, Tohru, ...
Kiba, Takatoshi, Yamada, Hisami, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Yamashino, Takafumi, ...
The Arabidopsis thaliana AHK4 histidine kinase (also known as CRE1 or WOL) acts as a cytokinin signal transducer, presumably, in concert with downstream components, such as histidine-containing...
Kaneko, Takakazu, Nakamura, Yasukazu, Sasamoto, Shigemi, Watanabe, Akiko, Kohara, Mitsuyo, Matsumoto, Midori, ...
The genome of the unicellular cyanobacterium Synechocystis sp. PCC 6803 consists of a single chromosome and several plasmids of different sizes, and the nucleotide sequences of the chromosome and...
Uchiumi, Toshiki, Shimoda, Yoshikazu, Tsuruta, Tomoko, Mukoyoshi, Yumi, Suzuki, Akihiro, Senoo, Keishi, ...
Leguminous plants have both symbiotic and nonsymbiotic hemoglobin (sym- and nonsym-Hb) genes. Three symbiotic (LjLb1, 2, 3) and one nonsymbiotic (LjNSG1) Hb genes were isolated from a genomic library...
Nakamura, Yasukazu, Kaneko, Takakazu, Sato, Shusei, Ikeuchi, Masahiko, Katoh, Hiroshi, Sasamoto, Shigemi, ...
The entire genome of a thermophilic unicellular cyanobacterium, Thermosynechococcus elongatus BP-1, was sequenced. The genome consisted of a circular chromosome 2,593,857 bp long, and no plasmid was...
Nakamura, Yasukazu, Kaneko, Takakazu, Sato, Shusei, Ikeuchi, Masahiko, Katoh, Hiroshi, Sasamoto, Shigemi, ...
Nakamura, Yasukazu, Kaneko, Takakazu, Asamizu, Erika, Kato, Tomohiko, Sato, Shusei, Tabata, Satoshi
Sixty-five TAC (transformation-competent artificial chromosomes) clones were selected from a genomic library of Lotus japonicus accession MG-20 based on the sequence information of expressed...
Hagio, Miki, Sakurai, Isamu, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Wada, Hajime
Phosphatidylglycerol is a ubiquitous phospholipid in the biological membranes of many organisms. In plants, phosphatidylglycerol is mainly present in thylakoid membranes and has been suggested to...
Hattori, Yoshiyuki, Omori, Hirofumi, Hanyu, Masaki, Kaseda, Noriko, Mishima, Elina, Kaneko, Takakazu, ...
For effective exploitation of the genome sequence information of Lotus microsymbiont, Mesorhizobium loti MAFF303099, to discover gene functions, we have constructed an ordered and mutually...
Kondou, Youichi, Mogami, Norifumi, Hoshi, Fumiko, Kutsuna, Shinsuke, Nakazawa, Miki, Sakurai, Tetsuya, ...
We identified an open reading frame from a database of the entire genome of Synechococcus elongatus, the product of which was very similar to pixJ1, which was proposed as photoreceptor gene for...
Taniguchi, Mitsutaka, Taniguchi, Yojiro, Kawasaki, Michio, Takeda, Satomi, Kato, Tomohiko, Sato, Shusei, ...
We characterized three Arabidopsis genes, AtpOMT1, AtpDCT1 and AtpDCT2, localized on chromosome 5 and homologous to spinach chloroplastic 2-oxoglutarate/malate transporter (OMT) gene. The...
Kaneko, Takakazu, Nakamura, Yasukazu, Sato, Shusei, Minamisawa, Kiwamu, Uchiumi, Toshiki, Sasamoto, Shigemi, ...
The complete nucleotide sequence of the genome of a symbiotic bacterium Bradyrhizobium japonicum USDA110 was determined. The genome of B. japonicum was a single circular chromosome 9,105,828 bp in...
Kaneko, Takakazu, Nakamura, Yasukazu, Sato, Shusei, Minamisawa, Kiwamu, Uchiumi, Toshiki, Sasamoto, Shigemi, ...
Ohmori, Masayuki, Ikeuchi, Masahiko, Sato, Naoki, Wolk, Peter, Kaneko, Takakazu, Ogawa, Teruo, ...
Computational analysis of gene structures in the genome of Anabaena sp. PCC 7120 revealed the presence of a large number of genes encoding proteins with multiple functional domains. This was most...
Hayashi, Masaki, Miyahara, Akira, Sato, Shusei, Kato, Tomohiko, Yoshikawa, Makoto, Taketa, Michiko, ...
Among leguminous plants, the model legume Lotus japonicus (Regel) Larsen has many biological and genetic advantages. We have developed a genetic linkage map of L. japonicus based on amplified...
Sato, Shusei, Kaneko, Takakazu, Nakamura, Yasukazu, Asamizu, Erika, Kato, Tomohiko, Tabata, Satoshi
A total of 56T AC clones with an average insert size of 100 kb were isolated from a TAC library of the Lotus japonicus genome based on the expressed sequences tags (ESTs), cDNA and gene information,...
Sasaki, Yuko, Asamizu, Erika, Shibata, Daisuke, Nakamura, Yasukazu, Kaneko, Takakazu, Awai, Koichiro, ...
Jasmonates mediate various physiological events in plant cells such as defense responses, flowering, and senescence through intracellular and intercellular signaling pathways, and the expression of a...
Ueguchi, Chiharu, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi
We previously identified a set of structurally related genes, AHK2, 3 and 4, each encoding a sensor histidine kinase in Arabidopsis thaliana. To determine the relevant biological functions, we...
Kaneko, Takakazu, Nakamura, Yasukazu, Wolk, C. Peter, Kuritz, Tanya, Sasamoto, Shigemi, Watanabe, Akiko, ...
The nucleotide sequence of the entire genome of a filamentous cyanobacterium, Anabaena sp. strain PCC 7120, was determined. The genome of Anabaena consisted of a single chromosome (6,413,771 bp) and...
Kaneko, Takakazu, Nakamura, Yasukazu, Wolk, C. Peter, Kuritz, Tanya, Sasamoto, Shigemi, Watanabe, Akiko, ...
Sato, Shigeru, Kato, Tomohiko, Kakegawa, Koichi, Ishii, Tadashi, Liu, Yao-Guang, Awano, Tatsuya, ...
A temperature-sensitive, elongation-deficient mutant of Arabidopsis thaliana was isolated. At the non-permissive temperature of 31°C, the mutation impaired tissue elongation; otherwise, tissue...
Asamizu, Erika, Nakamura, Yasukazu, Sato, Shusei, Tabata, Satoshi
For comprehensive analysis of genes expressed in the model dicotyledonous plant, Arabidopsis thaliana, expressed sequence tags (ESTs) were accumulated. Normalized and size-selected cDNA libraries...
Analysis of Expressed Sequence Tags of Flower Buds in Lotus japonicus (2000)
Endo, Makoto, Kokubun, Takao, Takahata, Yoshihito, Higashitani, Atsushi, Tabata, Satoshi, Watanabe, Masao
In order to study gene expression in a reproductive organ, we constructed a cDNA library of mature flower buds in Lotus japonicus, and characterized expressed sequence tags (ESTs) of 842 clones...
Kaneko, Takakazu, Katoh, Tomohiko, Sato, Shusei, Nakamura, Yasukazu, Asamizu, Erika, Tabata, Satoshi
To deduce the entire sequence of the top arm of the Arabidopsis thaliana chromosome 3, the sequence determination was performed on a total of 90 P1, TAC and BAC clones chosen according to our...
Nikaido, Itoshi, Asamizu, Erika, Nakajima, Maiko, Nakamura, Yasukazu, Saga, Naotsune, Tabata, Satoshi
A total of 10,154 5′-end expressed sequence tags (EST) were established from the normalized and size-selected cDNA libraries of a marine red alga, Porphyra yezoensis. Among the ESTs, 2140 were...
Kaya, Hidetaka, Sato, Shusei, Tabata, Satoshi, Kobayashi, Yasushi, Iwabuchi, Masaki, Araki, Takashi
We isolated a T-DNA-tagged mutant named hosoba toge toge (hot) in which a pleiotropic phenotype was observed in both the shoot and root throughout the life cycle. The phenotype and allelism indicated...
Complete Structure of the Chloroplast Genome of a Legume, Lotus japonicus (2000)
Kato, Tomohiko, Kaneko, Takakazu, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi
The nucleotide sequence of the entire chloroplast genome (150,519 bp) of a legume, Lotus japonicus, has been determined. The circular double-stranded DNA contains a pair of inverted repeats of 25,156...
Complete Genome Structure of the Nitrogen-fixing Symbiotic Bacterium Mesorhizobium loti (2000)
Kaneko, Takakazu, Nakamura, Yasukazu, Sato, Shusei, Asamizu, Erika, Kato, Tomohiko, Sasamoto, Shigemi, ...
The complete nucleotide sequence of the genome of a symbiotic bacterium Mesorhizobium loti strain MAFF303099 was determined. The genome of M. loti consisted of a single chromosome (7, 036, 071 bp)...
Kaneko, Takakazu, Nakamura, Yasukazu, Sato, Shusei, Asamizu, Erika, Kato, Tomohiko, Sasamoto, Shigemi, ...
Asamizu, Erika, Miura, Kenji, Kucho, Kenichi, Inoue, Yoshihiro, Fukuzawa, Hideya, Ohyama, Kanji, ...
To characterize genes whose expression is induced in carbon-stress conditions, 12,969 and 13,450 5′-end expressed sequence tags (ESTs) were generated from cells grown in low-CO2 and high-CO2...
CyanoBase, the genome database for Synechocystis sp. strain PCC6803: status for the year 2000 (2000)
Nakamura, Yasukazu, Kaneko, Takakazu, Tabata, Satoshi
CyanoBase provides an online resource for access to data on genomic information about the cyanobacterium Synechocystis sp. strain PCC6803. The database contains annotations for each protein-coding...
Generation of 7137 Non-redundant Expressed Sequence Tags from a Legume, Lotus japonicus (2000)
Asamizu, Erika, Nakamura, Yasukazu, Sato, Shusei, Tabata, Satoshi
For comprehensive analysis of genes expressed in a model legume, Lotus japonicus, a total of 22,983 5′ end expressed sequence tags (ESTs) were accumulated from normalized and size-selected cDNA...
Sato, Shusei, Nakamura, Yasukazu, Kaneko, Takakazu, Katoh, Tomohiko, Asamizu, Erika, Tabata, Satoshi
Based on the physical map of Arabidopsis thaliana chromosome 3 previously constructed with CIC YAC, TAC, P1 and BAC clones (Sato, S. et al., DNA Res., 5, 163–168, 1998), a total of 60 P1 and TAC...
Sato, Shusei, Nakamura, Yasukazu, Kaneko, Takakazu, Katoh, Tomohiko, Asamizu, Erika, Kotani, Hirokazu, ...
In our ongoing project to deduce the nucleotide sequence of Arabidopsis thaliana chromosome 5, non-redundant P1 and TAC clones have been sequenced on the basis of the fine physical map, and as of...
Asamizu, Erika, Nakamura, Yasukazu, Sato, Shusei, Fukuzawa, Hideya, Tabata, Satoshi
To understand genetic information carried in a unicellular green alga, Chlamydomonas reinhardtii, normalized and size-selected cDNA libraries were constructed from cells at photoautotrophic growth,...
Complete Structure of the Chloroplast Genome of Arabidopsis thaliana (1999)
Sato, Shusei, Nakamura, Yasukazu, Kaneko, Takakazu, Asamizu, Erika, Tabata, Satoshi
The complete nucleotide sequence of the chloroplast genome of Arabidopsis thaliana has been determined. The genome as a circular DNA composed of 154,478 bp containing a pair of inverted repeats of...
A Sequence-ready Contig Map of the Top Arm of Arabidopsis thaliana Chromosome 3 (1999)
Sato, Shusei, Kaneko, Takakazu, Kotani, Hirokazu, Hayashi, Reiko, Liu, Yao-Guang, Shibata, Daisuke, ...
A fine physical map of the top arm of Arabidopsis thaliana chromosome 3 has been constructed by ordering P1, TAC and BAC clones using the sequences of a variety of DNA markers and end-sequences of...
Kaneko, Takakazu, Katoh, Tomohiko, Sato, Shusei, Nakamura, Yasukazu, Asamizu, Erika, Kotani, Hirokazu, ...
In this series of projects sequencing the entire genome of Arabidopsis thaliana chromosome 5, nonredundant P1 and TAC clones have been sequenced according to the fine physical map, and as of May 7,...
Sato, Shusei, Kotani, Hirokazu, Hayashi, Reiko, Liu, Yao-Guang, Shibata, Daisuke, Tabata, Satoshi
We have constructed a physical map of Arabidopsis thaliana chromosome 3 by ordering the clones from CIC YAC, P1, TAC and BAC libraries using the sequences of a variety of genetic and EST markers and...
Kotani, Hirokazu, Nakamura, Yasukazu, Sato, Shusei, Asamizu, Erika, Kaneko, Takakazu, Miyajima, Nobuyuki, ...
Nineteen Pl and TAC clones, which have been mapped on the fine physical map of the Arabidopsis thaliana chromosome 5, were sequenced according to the shotgun-based strategy, and their structural...
Asamizu, Erika, Sato, Shusei, Kaneko, Takakazu, Nakamura, Yasukazu, Kotani, Hirokazu, Miyajima, Nobuyuki, ...
A total of 17 Pl and TAC clones each representing an assigned region of chromosome 5 were isolated from P1 and TAC genomic libraries of Arabidopsis thaliana Columbia, and their nucleotide sequences...
Kaneko, Takakazu, Kotani, Hirokazu, Nakamura, Yasukazu, Sato, Shusei, Asamizu, Erika, Miyajima, Nobuyuki, ...
The nucleotide sequences of 21 Pl and TAC clones which have been precisely localized to the fine physical map of the Arabidopsis thaliana chromosome 5, were determined, and their sequence features...
Sato, Shusei, Kaneko, Takakazu, Kotani, Hirokazu, Nakamura, Yasukazu, Asamizu, Erika, Miyajima, Nobuyuki, ...
Nineteen Pl and TAC clones, which have been precisely localized to the fine physical map of Arabidopsis thaliana chromosome 5, were newly sequenced, and their sequence features were analysed. The...
Complete Genome Structure of the Unicellular Cyanobacterium Synechocystis sp. PCC6803 (1997)
Kaneko, Takakazu, Tabata, Satoshi
Cyanobacteria are photoautotrophic organisms capable of oxygen-producing photosynthesis similar to that in eukaryotic algae and plants, and because of this, they have been used as model organisms for...
Kotani, Hirokazu, Sato, Shusei, Fukami, Masanobu, Hosouchi, Tsutomu, Nakazaki, Naomi, Okumura, Satomi, ...
A fine physical map of Arabidopsis thaliana chromosome 5 was constructed by ordering the clones from YAC, P1, TAC and BAC libraries of the genome using the sequences of a variety of genetic and EST...
Nakamura, Yasukazu, Sato, Shusei, Kaneko, Takakazu, Kotani, Hirokazu, Asamizu, Erika, Miyajima, Nobuyuki, ...
A total of 17 Pl and TAC clones each containing a marker(s) specifically mapped on chromosome 5 were isolated from P1 and TAC libraries of the Arabidopsis thaliana Columbia genome, and their...
Sato, Shusei, Kotani, Hirokazu, Nakamura, Yasukazu, Kaneko, Takakazu, Asamizu, Erika, Fukami, Masanobu, ...
A total of 20 Pl clones with an average insert size of 80 kb and each containing a marker(s) specifically mapped on chromosome 5 were isolated from a P1 library of the Arabidopsis thaliana genome,...
Kotani, Hirokazu, Nakamura, Yasukazu, Sato, Shusei, Kaneko, Takakazu, Asamizu, Erika, Miyajima, Nobuyuki, ...
A total of 13 Pl clones, each containing a marker(s) specifically mapped on chromosome 5, were isolated from a P1 library of the Arabidopsis thaliana Columbia genome, and their nucleotide sequences...
Mizuno, Takeshi, Kaneko, Takakazu, Tabata, Satoshi
Bacteria have devised sophisticated signaling systems for eliciting a variety of adaptive responses to their environment, which are generally referred to as the “two-component regulatory system.”...
Kaneko, Takakazu, Sato, Shusei, Kotani, Hirokazu, Tanaka, Ayako, Asamizu, Erika, Nakamura, Yasukazu, ...
The sequence determination of the entire genome of the Synechocystis sp. strain PCC6803 was completed. The total length of the genome finally confirmed was 3,573,470 bp, including the previously...
Kaneko, Takakazu, Sato, Shusei, Kotani, Hirokazu, Tanaka, Ayako, Asamizu, Erika, Nakamura, Yasukazu, ...
Structural Analysis of a recA-like Gene in the Genome of Arabidopsis thaliana (1995)
Sato, Shusei, Hotta, Yasuo, Tabata, Satoshi
A recA-like gene was identified in the genome of Arabidopsis thaliana by means of PCR using primers designed on the basis of previously reported amino acid sequences of eukaryotic RecA-like proteins....
Kaneko, Takakazu, Tanaka, Ayako, Sato, Shusei, Kotani, Hirokazu, Sazuka, Takashi, Miyajima, Nobuyuki, ...
The contiguous sequence of 1,003,450 bp spanning map positions 64% to 92% of the genome of Synechocystis sp. strain PCC6803 has been deduced. Computer analysis of the sequence predicts that this...
Sato, Shusei, Seki, Naohiko, Hotta, Yasuo, Tabata, Satoshi
Using the cDNAclone from mouse testis which carries the conserved sequences among meiosis-specific recA-like genes, a highly homologous cDNA clone was isolated from a cDNA library of human testis....
Kaneko, Takakazu, Tanaka, Ayako, Sato, Shusei, Kotani, Hirokazu, Sazuka, Takashi, Miyajima, Nobuyuki, ...
Nagase, Takahiro, Miyajima, Nobuyuki, Tanaka, Ayako, Sazuka, Takashi, Seki, Naohiko, Sato, Shusei, ...
We isolated full-length cDNA clones from size-fractionated cDNA libraries of human immature myeloid cell line KG-1, and the coding sequences of 40 genes were newly predicted. A computer search of the...
Nagase, Takahiro, Miyajima, Nobuyuki, Tanaka, Ayako, Sazuka, Takashi, Seki, Naohiko, Sato, Shusei, ...
Hirosawa, Makoto, Kaneko, Takakazu, Tabata, Satoshi, McIninch, James D., Hayes, William S., Borodovsky, Mark, ...
Using the computer program GeneMark, the open reading frames (ORFs) previously assigned within the one megabase sequence data of the genome of the cyanobacterium, Synechocystis sp. strain PCC6803...
Kotani, Hirokazu, Tanaka, Ayako, Kaneko, Takakazu, Sato, Shusei, Sugiura, Masahiro, Tabata, Satoshi
We have previously constructed the physical map of a cyanobacterium, Synechoystis sp. strain PCC6803 on the basis of restriction and linking clone analysis. Since a total of 82 genes and gene...
Characterization of a Mouse recA-like Gene Specifically Expressed in Testis (1995)
Sato, Shusei, Kobayashi, Toshiyuki, Hotta, Yasuo, Tabata, Satoshi
Using the sequence information on a class of recA-like genes, which have been isolated from meiosisspecific cDNA libraries of Lilium and budding yeast and identified in various plant cells, a new...
Nomura, Nobuo, Nagase, Takahiro, Miyajima, Nobuyuki, Sazuka, Takashi, Tanaka, Ayako, Sato, Shusei, ...
By applying the protocol previously established, we isolated and sequenced full-length cDNA clones longer than 2 kb from a cDNA library of human immature myeloid cell line KG-1, and the coding...
Nomura, Nobuo, Nagase, Takahiro, Miyajima, Nobuyuki, Sazuka, Takashi, Tanaka, Ayako, Sato, Shusei, ...
A Physical Map of the Genome of a Unicellular Cyanobacterium Synechocystis sp. Strain PCC6803 (1994)
Kotani, Hirokazu, Kaneko, Takakazu, Matsubayashi, Toru, Sato, Shusei, Sugiura, Masahiro, Tabata, Satoshi
An accurate physical map of the genome of a cyanobacterium, Synechocystis sp. strain PCC6803, was constructed on the basis of restriction and linking clone analysis. The genome contained 6...
Characterization of cDNAs Induced in Meiotic Prophase in Lily Microsporocytes (1994)
Kobayashi, Toshiyuki, Kobayashi, Etsuko, Sato, Shusei, Hotta, Yasuo, Miyajima, Nobuyuki, Tanaka, Ayako, ...
To identify and analyze genes functioning during reproductive cell formation in higher plants, cDNAs harboring the messages induced in meiotic prophase were isolated and characterized. A cDNA library...
Nomura, Nobuo, Miyajima, Nobuyuki, Sazuka, Takashi, Tanaka, Ayako, Kawarabayasi, Yutaka, Sato, Shusei, ...
We established a protocol for the prediction of the coding sequences of unidentified human genes based on the double selection and sequence analysis of cDNA clones with inserts carrying unreported...
Nomura, Nobuo, Miyajima, Nobuyuki, Sazuka, Takashi, Tanaka, Ayako, Kawarabayasi, Yutaka, Sato, Shusei, ...
Tabata, Satoshi, Oka, Atsuhiro, Sugimoto, Kazunori, Takanami, Mituru, Yasuda, Soichi, Hirota, Yukinon
The replication origin of the E.coli K-12 chromosome has been isolated as autonomously replicating molecules (oriC plasmid), and the DNA region essential for replicating function (oriC) has been...
The organization of 5S ribosomal RNA (rRNA) genes in the genome of Schizosaccharomyces pombe has been investigated by restriction and hybridization analyses. The 5S rRNA genes were not linked to the...
Liu, Yao-Guang, Shirano, Yumiko, Fukaki, Hidehiro, Yanai, Yukihiro, Tasaka, Masao, Tabata, Satoshi, ...
To accelerate gene isolation from plants by positional cloning, vector systems suitable for both chromosome walking and genetic complementation are highly desirable. Therefore, we developed a...
Shibata, Mari, Ohkawa, Hiroshi, Kaneko, Takakazu, Fukuzawa, Hideya, Tabata, Satoshi, Kaplan, Aaron, ...
Cyanobacteria possess a CO2-concentating mechanism that involves active CO2 uptake and HCO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts}...
CyanoBase, the genome database for Synechocystis sp. strain PCC6803: status for the year 2000
Nakamura, Yasukazu, Kaneko, Takakazu, Tabata, Satoshi
CyanoBase provides an online resource for access to data on genomic information about the cyanobacterium Synechocystis sp. strain PCC6803. The database contains annotations for each protein-coding...
Kasahara, Masahiro, Swartz, Trevor E., Olney, Margaret A., Onodera, Akihiko, Mochizuki, Nobuyoshi, Fukuzawa, Hideya, ...
Phototropins (phot1 and phot2, formerly designated nph1 and npl1) are blue-light receptors that mediate phototropism, blue light-induced chloroplast relocation, and blue light-induced stomatal...
Hanaoka, Hideki, Noda, Takeshi, Shirano, Yumiko, Kato, Tomohiko, Hayashi, Hiroaki, Shibata, Daisuke, ...
Autophagy is an intracellular process for vacuolar bulk degradation of cytoplasmic components. The molecular machinery responsible for yeast and mammalian autophagy has recently begun to be...
Shimada, Norimoto, Aoki, Toshio, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Ayabe, Shin-ichi
Leguminous plants produce 5-deoxyflavonoids and 5-deoxyisoflavonoids that play essential roles in legume-microbe interactions. Together with chalcone polyketide reductase and cytochrome P450...
Expression Islands Clustered on the Symbiosis Island of the Mesorhizobium loti Genome
Uchiumi, Toshiki, Ohwada, Takuji, Itakura, Manabu, Mitsui, Hisayuki, Nukui, Noriyuki, Dawadi, Pramod, ...
Rhizobia are symbiotic nitrogen-fixing soil bacteria that are associated with host legumes. The establishment of rhizobial symbiosis requires signal exchanges between partners in microaerobic...
In planta functions of the Arabidopsis cytokinin receptor family
Higuchi, Masayuki, Pischke, Melissa S., Mähönen, Ari Pekka, Miyawaki, Kaori, Hashimoto, Yukari, Seki, Motoaki, ...
Since their discovery as cell-division factors in plant tissue culture about five decades ago, cytokinins have been hypothesized to play a central role in the regulation of cell division and...
Forslund, Karin, Morant, Marc, Jørgensen, Bodil, Olsen, Carl Erik, Asamizu, Erika, Sato, Shusei, ...
Lotus japonicus was shown to contain the two nitrile glucosides rhodiocyanoside A and rhodiocyanoside D as well as the cyanogenic glucosides linamarin and lotaustralin. The content of cyanogenic and...
Nishimura, Chika, Ohashi, Yoshi, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Ueguchi, Chiharu
Cytokinins are plant hormones that may play essential and crucial roles in various aspects of plant growth and development. Although the functional significance of exogenous cytokinins as to the...
Spermidine Synthase Genes Are Essential for Survival of Arabidopsis
Imai, Akihiro, Matsuyama, Takashi, Hanzawa, Yoshie, Akiyama, Takashi, Tamaoki, Masanori, Saji, Hikaru, ...
The cellular polyamines putrescine, spermidine, and spermine are ubiquitous in nature and have been implicated in a wide range of growth and developmental processes. There is little information,...
Miura, Kenji, Yamano, Takashi, Yoshioka, Satoshi, Kohinata, Tsutomu, Inoue, Yoshihiro, Taniguchi, Fumiya, ...
Photosynthetic acclimation to CO2-limiting stress is associated with control of genetic and physiological responses through a signal transduction pathway, followed by integrated monitoring of the...
Yoshimoto, Kohki, Hanaoka, Hideki, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Noda, Takeshi, ...
Autophagy is an intracellular process for vacuolar degradation of cytoplasmic components. Thus far, plant autophagy has been studied primarily using morphological analyses. A recent genome-wide...
Huang, Guocun, Fan, Qing, Lechno-Yossef, Sigal, Wojciuch, Elizabeth, Wolk, C. Peter, Kaneko, Takakazu, ...
As demonstrated with alr2835 (hepA) and alr2834 (hepC) mutants, heterocysts of Anabaena sp. strain PCC 7120, a filamentous cyanobacterium, must have an envelope polysaccharide layer (the Hep+...
Nakaune, Satoru, Yamada, Kenji, Kondo, Maki, Kato, Tomohiko, Tabata, Satoshi, Nishimura, Mikio, ...
Vacuolar processing enzyme (VPE) is a Cys proteinase responsible for the maturation of vacuolar proteins. Arabidopsis thaliana δVPE, which was recently found in the database, was specifically and...
Sequencing the Genespaces of Medicago truncatula and Lotus japonicus1
Young, Nevin D., Cannon, Steven B., Sato, Shusei, Kim, Dongjin, Cook, Douglas R., Town, Chris D., ...
Ooki, Yasuhiro, Banba, Mari, Yano, Koji, Maruya, Jumpei, Sato, Shusei, Tabata, Satoshi, ...
We isolated a recessive symbiotic mutant of Lotus japonicus that defines a genetic locus, LOT1 (for low nodulation and trichome distortion). The nodule number per plant of the mutant was about...
Karas, Bogumil, Murray, Jeremy, Gorzelak, Monika, Smith, Alexandra, Sato, Shusei, Tabata, Satoshi, ...
In many legumes, including Lotus japonicus and Medicago truncatula, susceptible root hairs are the primary sites for the initial signal perception and physical contact between the host plant and the...
Krusell, Lene, Krause, Katja, Ott, Thomas, Desbrosses, Guilhem, Krämer, Ute, Sato, Shusei, ...
Symbiotic nitrogen fixation (SNF) by intracellular rhizobia within legume root nodules requires the exchange of nutrients between host plant cells and their resident bacteria. Little is known at the...
Roles of Arabidopsis AtREV1 and AtREV7 in Translesion Synthesis1
Takahashi, Shinya, Sakamoto, Ayako, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Tanaka, Atsushi
Plants have mechanisms for repairing and tolerating detrimental effects by various DNA damaging agents. A tolerance pathway that has been predicted to be present in higher plants is translesion...
Kanamori, Norihito, Madsen, Lene Heegaard, Radutoiu, Simona, Frantescu, Mirela, Quistgaard, Esben M. H., Miwa, Hiroki, ...
Nuclear-cytoplasmic partitioning and traffic between cytoplasmic and nuclear compartments are fundamental processes in eukaryotic cells. Nuclear pore complexes mediate transport of proteins, RNAs and...
Kistner, Catherine, Winzer, Thilo, Pitzschke, Andrea, Mulder, Lonneke, Sato, Shusei, Kaneko, Takakazu, ...
A combined genetic and transcriptome analysis was performed to study the molecular basis of the arbuscular mycorrhiza (AM) symbiosis. By testing the AM phenotype of nodulation-impaired mutants and...
Sandal, Niels, Krusell, Lene, Radutoiu, Simona, Olbryt, Magdalena, Pedrosa, Andrea, Stracke, Silke, ...
A genetic map for the model legume Lotus japonicus has been developed. The F(2) mapping population was established from an interspecific cross between L. japonicus and L. filicaulis. A high level of...
Control of petal shape and floral zygomorphy in Lotus japonicus
Feng, Xianzhong, Zhao, Zhong, Tian, Zhaoxia, Xu, Shilei, Luo, Yonghai, Cai, Zhigang, ...
Zygomorphic flowers, with bilateral (dorsoventral) symmetry, are considered to have evolved several times independently in flowering plants. In Antirrhinum majus, floral dorsoventral symmetry depends...
Liu, Yao-Guang, Shirano, Yumiko, Fukaki, Hidehiro, Yanai, Yukihiro, Tasaka, Masao, Tabata, Satoshi, ...
To accelerate gene isolation from plants by positional cloning, vector systems suitable for both chromosome walking and genetic complementation are highly desirable. Therefore, we developed a...
Shibata, Mari, Ohkawa, Hiroshi, Kaneko, Takakazu, Fukuzawa, Hideya, Tabata, Satoshi, Kaplan, Aaron, ...
Cyanobacteria possess a CO2-concentating mechanism that involves active CO2 uptake and HCO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts}...
CyanoBase, the genome database for Synechocystis sp. strain PCC6803: status for the year 2000
Nakamura, Yasukazu, Kaneko, Takakazu, Tabata, Satoshi
CyanoBase provides an online resource for access to data on genomic information about the cyanobacterium Synechocystis sp. strain PCC6803. The database contains annotations for each protein-coding...
Kasahara, Masahiro, Swartz, Trevor E., Olney, Margaret A., Onodera, Akihiko, Mochizuki, Nobuyoshi, Fukuzawa, Hideya, ...
Phototropins (phot1 and phot2, formerly designated nph1 and npl1) are blue-light receptors that mediate phototropism, blue light-induced chloroplast relocation, and blue light-induced stomatal...
Hanaoka, Hideki, Noda, Takeshi, Shirano, Yumiko, Kato, Tomohiko, Hayashi, Hiroaki, Shibata, Daisuke, ...
Autophagy is an intracellular process for vacuolar bulk degradation of cytoplasmic components. The molecular machinery responsible for yeast and mammalian autophagy has recently begun to be...
Shimada, Norimoto, Aoki, Toshio, Sato, Shusei, Nakamura, Yasukazu, Tabata, Satoshi, Ayabe, Shin-ichi
Leguminous plants produce 5-deoxyflavonoids and 5-deoxyisoflavonoids that play essential roles in legume-microbe interactions. Together with chalcone polyketide reductase and cytochrome P450...
Expression Islands Clustered on the Symbiosis Island of the Mesorhizobium loti Genome
Uchiumi, Toshiki, Ohwada, Takuji, Itakura, Manabu, Mitsui, Hisayuki, Nukui, Noriyuki, Dawadi, Pramod, ...
Rhizobia are symbiotic nitrogen-fixing soil bacteria that are associated with host legumes. The establishment of rhizobial symbiosis requires signal exchanges between partners in microaerobic...
In planta functions of the Arabidopsis cytokinin receptor family
Higuchi, Masayuki, Pischke, Melissa S., Mähönen, Ari Pekka, Miyawaki, Kaori, Hashimoto, Yukari, Seki, Motoaki, ...
Since their discovery as cell-division factors in plant tissue culture about five decades ago, cytokinins have been hypothesized to play a central role in the regulation of cell division and...
Forslund, Karin, Morant, Marc, Jørgensen, Bodil, Olsen, Carl Erik, Asamizu, Erika, Sato, Shusei, ...
Lotus japonicus was shown to contain the two nitrile glucosides rhodiocyanoside A and rhodiocyanoside D as well as the cyanogenic glucosides linamarin and lotaustralin. The content of cyanogenic and...
Nishimura, Chika, Ohashi, Yoshi, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Ueguchi, Chiharu
Cytokinins are plant hormones that may play essential and crucial roles in various aspects of plant growth and development. Although the functional significance of exogenous cytokinins as to the...
Spermidine Synthase Genes Are Essential for Survival of Arabidopsis
Imai, Akihiro, Matsuyama, Takashi, Hanzawa, Yoshie, Akiyama, Takashi, Tamaoki, Masanori, Saji, Hikaru, ...
The cellular polyamines putrescine, spermidine, and spermine are ubiquitous in nature and have been implicated in a wide range of growth and developmental processes. There is little information,...
Miura, Kenji, Yamano, Takashi, Yoshioka, Satoshi, Kohinata, Tsutomu, Inoue, Yoshihiro, Taniguchi, Fumiya, ...
Photosynthetic acclimation to CO2-limiting stress is associated with control of genetic and physiological responses through a signal transduction pathway, followed by integrated monitoring of the...
Yoshimoto, Kohki, Hanaoka, Hideki, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Noda, Takeshi, ...
Autophagy is an intracellular process for vacuolar degradation of cytoplasmic components. Thus far, plant autophagy has been studied primarily using morphological analyses. A recent genome-wide...
Huang, Guocun, Fan, Qing, Lechno-Yossef, Sigal, Wojciuch, Elizabeth, Wolk, C. Peter, Kaneko, Takakazu, ...
As demonstrated with alr2835 (hepA) and alr2834 (hepC) mutants, heterocysts of Anabaena sp. strain PCC 7120, a filamentous cyanobacterium, must have an envelope polysaccharide layer (the Hep+...
Nakaune, Satoru, Yamada, Kenji, Kondo, Maki, Kato, Tomohiko, Tabata, Satoshi, Nishimura, Mikio, ...
Vacuolar processing enzyme (VPE) is a Cys proteinase responsible for the maturation of vacuolar proteins. Arabidopsis thaliana δVPE, which was recently found in the database, was specifically and...
Sequencing the Genespaces of Medicago truncatula and Lotus japonicus1
Young, Nevin D., Cannon, Steven B., Sato, Shusei, Kim, Dongjin, Cook, Douglas R., Town, Chris D., ...
Ooki, Yasuhiro, Banba, Mari, Yano, Koji, Maruya, Jumpei, Sato, Shusei, Tabata, Satoshi, ...
We isolated a recessive symbiotic mutant of Lotus japonicus that defines a genetic locus, LOT1 (for low nodulation and trichome distortion). The nodule number per plant of the mutant was about...
Karas, Bogumil, Murray, Jeremy, Gorzelak, Monika, Smith, Alexandra, Sato, Shusei, Tabata, Satoshi, ...
In many legumes, including Lotus japonicus and Medicago truncatula, susceptible root hairs are the primary sites for the initial signal perception and physical contact between the host plant and the...
Krusell, Lene, Krause, Katja, Ott, Thomas, Desbrosses, Guilhem, Krämer, Ute, Sato, Shusei, ...
Symbiotic nitrogen fixation (SNF) by intracellular rhizobia within legume root nodules requires the exchange of nutrients between host plant cells and their resident bacteria. Little is known at the...
Roles of Arabidopsis AtREV1 and AtREV7 in Translesion Synthesis1
Takahashi, Shinya, Sakamoto, Ayako, Sato, Shusei, Kato, Tomohiko, Tabata, Satoshi, Tanaka, Atsushi
Plants have mechanisms for repairing and tolerating detrimental effects by various DNA damaging agents. A tolerance pathway that has been predicted to be present in higher plants is translesion...
Kistner, Catherine, Winzer, Thilo, Pitzschke, Andrea, Mulder, Lonneke, Sato, Shusei, Kaneko, Takakazu, ...
A combined genetic and transcriptome analysis was performed to study the molecular basis of the arbuscular mycorrhiza (AM) symbiosis. By testing the AM phenotype of nodulation-impaired mutants and...
Kanamori, Norihito, Madsen, Lene Heegaard, Radutoiu, Simona, Frantescu, Mirela, Quistgaard, Esben M. H., Miwa, Hiroki, ...
Nuclear-cytoplasmic partitioning and traffic between cytoplasmic and nuclear compartments are fundamental processes in eukaryotic cells. Nuclear pore complexes mediate transport of proteins, RNAs and...
Control of petal shape and floral zygomorphy in Lotus japonicus
Feng, Xianzhong, Zhao, Zhong, Tian, Zhaoxia, Xu, Shilei, Luo, Yonghai, Cai, Zhigang, ...
Zygomorphic flowers, with bilateral (dorsoventral) symmetry, are considered to have evolved several times independently in flowering plants. In Antirrhinum majus, floral dorsoventral symmetry depends...
Sandal, Niels, Krusell, Lene, Radutoiu, Simona, Olbryt, Magdalena, Pedrosa, Andrea, Stracke, Silke, ...
A genetic map for the model legume Lotus japonicus has been developed. The F(2) mapping population was established from an interspecific cross between L. japonicus and L. filicaulis. A high level of...
Signal Transduction Genes Required for Heterocyst Maturation in Anabaena sp. Strain PCC 7120
Fan, Qing, Lechno-Yossef, Sigal, Ehira, Shigeki, Kaneko, Takakazu, Ohmori, Masayuki, Sato, Naoki, ...
How heterocyst differentiation is regulated, once particular cells start to differentiate, remains largely unknown. Using near-saturation transposon mutagenesis and testing of transposon-tagged loci,...
Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes
Cannon, Steven B., Sterck, Lieven, Rombauts, Stephane, Sato, Shusei, Cheung, Foo, Gouzy, Jérôme, ...
Genome sequencing of the model legumes, Medicago truncatula and Lotus japonicus, provides an opportunity for large-scale sequence-based comparison of two genomes in the same plant family. Here we...
Miyawaki, Kaori, Tarkowski, Petr, Matsumoto-Kitano, Miho, Kato, Tomohiko, Sato, Shusei, Tarkowska, Danuse, ...
Cytokinins, which are central regulators of cell division and differentiation in plants, are adenine derivatives carrying an isopentenyl side chain that may be hydroxylated. Plants have two classes...
Biosynthesis of Ascorbic Acid in Legume Root Nodules1
Matamoros, Manuel A., Loscos, Jorge, Coronado, Maria J., Ramos, Javier, Sato, Shusei, Testillano, Pilar S., ...
Ascorbic acid (vitamin C) is a major antioxidant and redox buffer, but is also involved in other critical processes of plants. Recently, the hypothesis has been proposed that legume nodules are...
Arabidopsis plasma membrane protein crucial for Ca2+ influx and touch sensing in roots
Nakagawa, Yuko, Katagiri, Takeshi, Shinozaki, Kazuo, Qi, Zhi, Tatsumi, Hitoshi, Furuichi, Takuya, ...
Plants can sense and respond to mechanical stimuli, like animals. An early mechanism of mechanosensing and response is speculated to be governed by as-yet-unidentified sensory complexes containing a...
Saito, Katsuharu, Yoshikawa, Makoto, Yano, Koji, Miwa, Hiroki, Uchida, Hisaki, Asamizu, Erika, ...
In Lotus japonicus, seven genetic loci have been identified thus far as components of a common symbiosis (Sym) pathway shared by rhizobia and arbuscular mycorrhizal fungi. We characterized the nup85...
Kumagai, Hirotaka, Hakoyama, Tsuneo, Umehara, Yosuke, Sato, Shusei, Kaneko, Takakazu, Tabata, Satoshi, ...
Nitrogen-fixing symbiosis of legume plants with Rhizobium bacteria is established through complex interactions between two symbiotic partners. Similar to the mutual recognition and interactions at...
Ramos, Javier, Clemente, Maria R., Naya, Loreto, Loscos, Jorge, Pérez-Rontomé, Carmen, Sato, Shusei, ...
The biosynthesis of phytochelatins and homophytochelatins has been studied in nodulated plants of the model legume Lotus (Lotus japonicus). In the first 6 to 24 h of treatment with cadmium (Cd),...
Horst, Irmtraud, Welham, Tracey, Kelly, Simon, Kaneko, Takakazu, Sato, Shusei, Tabata, Satoshi, ...
In all plant species studied to date, sucrose synthase occurs as multiple isoforms. The specific functions of the different isoforms are for the most part not clear. Six isoforms of sucrose synthase...
Genome Sequencing and Genome Resources in Model Legumes
Sato, Shusei, Nakamura, Yasukazu, Asamizu, Erika, Isobe, Sachiko, Tabata, Satoshi
The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571
Lee, Kyung-Bum, De Backer, Philippe, Aono, Toshihiro, Liu, Chi-Te, Suzuki, Shino, Suzuki, Tadahiro, ...
The Tomato Sequencing Project, the First Cornerstone of the International Solanaceae Project (SOL)
Mueller, Lukas A., Tanksley, Steven D., Giovannoni, Jim J., Van Eck, Joyce, Stack, Stephen, Choi, Doil, ...
The genome of tomato (Solanum lycopersicum) is being sequenced by an international consortium of 10 countries (Korea, China, the United Kingdom, India, The Netherlands, France, Japan, Spain, Italy...
Ishida, Tetsuya, Hattori, Sayoko, Sano, Ryosuke, Inoue, Kayoko, Shirano, Yumiko, Hayashi, Hiroaki, ...
Arabidopsis thaliana TRANSPARENT TESTA GLABRA2 (TTG2) encodes a WRKY transcription factor and is expressed in young leaves, trichomes, seed coats, and root hairless cells. An examination of several...
Hougaard, Birgit Kristine, Madsen, Lene Heegaard, Sandal, Niels, De Carvalho Moretzsohn, Marcio, Fredslund, Jakob, Schauser, Leif, ...
We have previously described a bioinformatics pipeline identifying comparative anchor-tagged sequence (CATS) loci, combined with design of intron-spanning primers. The derived anchor markers defining...
Genetic control of floral zygomorphy in pea (Pisum sativum L.)
Wang, Zheng, Luo, Yonghai, Li, Xin, Wang, Liping, Xu, Shilei, Yang, Jun, ...
Floral zygomorphy (flowers with bilateral symmetry) has multiple origins and typically manifests two kinds of asymmetries, dorsoventral (DV) and organ internal (IN) asymmetries in floral and organ...
Bertioli, David J, Moretzsohn, Marcio C, Madsen, Lene H, Sandal, Niels, Leal-Bertioli, Soraya CM, Guimarães, Patricia M, ...
Wei, Min, Yokoyama, Tadashi, Minamisawa, Kiwamu, Mitsui, Hisayuki, Itakura, Manabu, Kaneko, Takakazu, ...
Initial interaction between rhizobia and legumes actually starts via encounters of both partners in the rhizosphere. In this study, the global expression profiles of Bradyrhizobium japonicum USDA 110...
Genome Structure of the Legume, Lotus japonicus
Sato, Shusei, Nakamura, Yasukazu, Kaneko, Takakazu, Asamizu, Erika, Kato, Tomohiko, Nakao, Mitsuteru, ...
The legume Lotus japonicus has been widely used as a model system to investigate the genetic background of legume-specific phenomena such as symbiotic nitrogen fixation. Here, we report structural...
A High-density Linkage Map of Lotus japonicus Based on AFLP and SSR Markers
Wang, Xinwang, Sato, Shusei, Tabata, Satoshi, Kawasaki, Shinji
A collection of 94 F6 individuals derived from crosses between Lotus japonicus, Gifu B-129 (G) and Miyakojima MG-20 (M) were used for mapping. By using the HEGS running system, 427 EcoRI/MseI primer...
Shimoda, Yoshikazu, Mitsui, Hisayuki, Kamimatsuse, Hiroko, Minamisawa, Kiwamu, Nishiyama, Eri, Ohtsubo, Yoshiyuki, ...
Rhizobia are nitrogen-fixing soil bacteria that establish endosymbiosis with some leguminous plants. The completion of several rhizobial genome sequences provides opportunities for genome-wide...
Shimoda, Yoshikazu, Shinpo, Sayaka, Kohara, Mitsuyo, Nakamura, Yasukazu, Tabata, Satoshi, Sato, Shusei
Global viewing of protein–protein interactions (PPIs) is a useful way to assign biological roles to large numbers of proteins predicted by complete genome sequence. Here, we systematically analyzed...
Watanabe, Mutsumi, Mochida, Keiichi, Kato, Tomohiko, Tabata, Satoshi, Yoshimoto, Naoko, Noji, Masaaki, ...
Ser acetyltransferase (SERAT), which catalyzes O-acetyl-Ser (OAS) formation, plays a key role in sulfur assimilation and Cys synthesis. Despite several studies on SERATs from various plant species,...
Maekawa-Yoshikawa, Makoto, Müller, Judith, Takeda, Naoya, Maekawa, Takaki, Sato, Shusei, Tabata, Satoshi, ...
The brush mutant of Lotus japonicus exhibits a temperature-dependent impairment in nodule, root, and shoot development. At 26°C, brush formed fewer nodules, most of which were not colonized by...
Construction of a consensus linkage map for red clover (Trifolium pratense L.)
Isobe, Sachiko, Kölliker, Roland, Hisano, Hiroshi, Sasamoto, Shigemi, Wada, Tshyuko, Klimenko, Irina, ...
CYCLOPS, a mediator of symbiotic intracellular accommodation
Yano, Koji, Yoshida, Satoko, Müller, Judith, Singh, Sylvia, Banba, Mari, Vickers, Kate, ...
The initiation of intracellular infection of legume roots by symbiotic rhizobia bacteria and arbuscular mycorrhiza (AM) fungi is preceded by the induction of calcium signatures in and around the...
Asamizu, Erika, Shimoda, Yoshikazu, Kouchi, Hiroshi, Tabata, Satoshi, Sato, Shusei
We have used reverse genetics to identify genes involved in legume-rhizobium symbiosis in Lotus japonicus. We obtained the sequences of 20 putative transcription factors from previously reported...
Høgslund, Niels, Radutoiu, Simona, Krusell, Lene, Voroshilova, Vera, Hannah, Matthew A., Goffard, Nicolas, ...
Genetic analyses of plant symbiotic mutants has led to the identification of key genes involved in Rhizobium-legume communication as well as in development and function of nitrogen fixing root...
High-density Integrated Linkage Map Based on SSR Markers in Soybean
Hwang, Tae-Young, Sayama, Takashi, Takahashi, Masakazu, Takada, Yoshitake, Nakamoto, Yumi, Funatsuki, Hideyuki, ...
A well-saturated molecular linkage map is a prerequisite for modern plant breeding. Several genetic maps have been developed for soybean with various types of molecular markers. Simple sequence...
Welham, Tracey, Pike, Jodie, Horst, Irmtraud, Flemetakis, Emmanouil, Katinakis, Panagiotis, Kaneko, Takakazu, ...
Neutral/alkaline invertases are a subgroup, confined to plants and cyanobacteria, of a diverse family of enzymes. A family of seven closely-related genes, LjINV1–LjINV7, is described here and their...
Osanai, Takashi, Imashimizu, Masahiko, Seki, Asako, Sato, Shusei, Tabata, Satoshi, Imamura, Sousuke, ...
Although regulation of sigma factors has been intensively investigated, anti-sigma factors have not been identified in oxygenic photosynthetic organisms. A previous study suggested that the sigma...
Map-Based Cloning of the Gene Associated With the Soybean Maturity Locus E3
Watanabe, Satoshi, Hideshima, Rumiko, Xia, Zhengjun, Tsubokura, Yasutaka, Sato, Shusei, Nakamoto, Yumi, ...
Photosensitivity plays an essential role in the response of plants to their changing environments throughout their life cycle. In soybean [Glycine max (L.) Merrill], several associations between...
Shimada, Norimoto, Sato, Shusei, Akashi, Tomoyoshi, Nakamura, Yasukazu, Tabata, Satoshi, Ayabe, Shin-ichi, ...
A model legume Lotus japonicus (Regel) K. Larsen is one of the subjects of genome sequencing and functional genomics programs. In the course of targeted approaches to the legume genomics, we analyzed...
Isobe, Sachiko, Nakaya, Akihiro, Tabata, Satoshi
In order to reveal quantitative trait loci (QTL) interactions and the relationship between various interactions in complex traits, we have developed a new QTL mapping approach, named genotype matrix...
A Large-scale Protein–protein Interaction Analysis in Synechocystis sp. PCC6803
Sato, Shusei, Shimoda, Yoshikazu, Muraki, Akiko, Kohara, Mitsuyo, Nakamura, Yasukazu, Tabata, Satoshi
Protein–protein interactions (PPIs) play crucial roles in protein function for a variety of biological processes. Data from large-scale PPI screening has contributed to understanding the function...
Characterization of the Soybean Genome Using EST-derived Microsatellite Markers
Hisano, Hiroshi, Sato, Shusei, Isobe, Sachiko, Sasamoto, Shigemi, Wada, Tsuyuko, Matsuno, Ai, ...
We generated a high-density genetic linkage map of soybean using expressed sequence tag (EST)-derived microsatellite markers. A total of 6920 primer pairs (10.9%) were designed to amplify simple...
Complete Genomic Structure of the Bloom-forming Toxic Cyanobacterium Microcystis aeruginosa NIES-843
Kaneko, Takakazu, Nakajima, Nobuyoshi, Okamoto, Shinobu, Suzuki, Iwane, Tanabe, Yuuhiko, Tamaoki, Masanori, ...
The nucleotide sequence of the complete genome of a cyanobacterium, Microcystis aeruginosa NIES-843, was determined. The genome of M. aeruginosa is a single, circular chromosome of 5 842 795 base...