Rapid prototyping of 3D DNA-origami shapes with caDNAno (2009)
Douglas, Shawn M., Marblestone, Adam H., Teerapittayanon, Surat, Vazquez, Alejandro, Church, George M., Shih, William M.
DNA nanotechnology exploits the programmable specificity afforded by base-pairing to produce self-assembling macromolecular objects of custom shape. For building megadalton-scale DNA nanostructures,...
Smith, Andrew, Greenbaum, Dov, Douglas, Shawn M, Long, Morrow, Gerstein, Mark
No abstract available.
PubNet: a flexible system for visualizing literature derived networks (2005)
Douglas, Shawn M, Montelione, Gaetano T, Gerstein, Mark
Abstract We have developed PubNet, a web-based tool that extracts several types of relationships returned by PubMed queries and maps them into networks, allowing for graphical visualization, textual...
PubNet: a flexible system for visualizing literature derived networks (2005)
Shawn M Douglas, Gaetano T Montelione, Mark Gerstein
Software
An XML-based approach to integrating heterogeneous yeast genome data (2004)
Kei-hoi Cheung, Deyun Pan, Andrew Smith, Michael Seringhaus, Shawn M. Douglas, Mark Gerstein
Abstract. While there are an increasing number of genomes (including the human genome) whose sequences have been fully or nearly completed, the budding yeast Saccharomyces cerevisiae was the first...
Chern-sing Goh, Ning Lan, Nathaniel Echols, Shawn M. Douglas, Duncan Milburn, Paul Bertone, ...
We present version 2 of the SPINE system for structural proteomics. SPINE is available over the web at
Goh, Chern-Sing, Lan, Ning, Echols, Nathaniel, Douglas, Shawn M., Milburn, Duncan, Bertone, Paul, ...
We present version 2 of the SPINE system for structural proteomics. SPINE is available over the web at http://nesg.org. It serves as the central hub for the Northeast Structural Genomics Consortium,...
SPINE 2: a system for collaborative structural proteomics within a federated database framework
Goh, Chern-Sing, Lan, Ning, Echols, Nathaniel, Douglas, Shawn M., Milburn, Duncan, Bertone, Paul, ...
We present version 2 of the SPINE system for structural proteomics. SPINE is available over the web at http://nesg.org. It serves as the central hub for the Northeast Structural Genomics Consortium,...
Smith, Andrew, Greenbaum, Dov, Douglas, Shawn M, Long, Morrow, Gerstein, Mark
A direct impediment to the optimal use of online databases is the increasing prevalence, severity, and toll of computer and network security incidents. Funding agencies should set up working groups...
PubNet: a flexible system for visualizing literature derived networks
Douglas, Shawn M, Montelione, Gaetano T, Gerstein, Mark
PubNet is a web-based tool to extract several types of relationships returned by PubMed queries and map them into networks.
SPINE 2: a system for collaborative structural proteomics within a federated database framework
Goh, Chern-Sing, Lan, Ning, Echols, Nathaniel, Douglas, Shawn M., Milburn, Duncan, Bertone, Paul, ...
We present version 2 of the SPINE system for structural proteomics. SPINE is available over the web at http://nesg.org. It serves as the central hub for the Northeast Structural Genomics Consortium,...
Smith, Andrew, Greenbaum, Dov, Douglas, Shawn M, Long, Morrow, Gerstein, Mark
A direct impediment to the optimal use of online databases is the increasing prevalence, severity, and toll of computer and network security incidents. Funding agencies should set up working groups...
PubNet: a flexible system for visualizing literature derived networks
Douglas, Shawn M, Montelione, Gaetano T, Gerstein, Mark
PubNet is a web-based tool to extract several types of relationships returned by PubMed queries and map them into networks.
DNA-nanotube-induced alignment of membrane proteins for NMR structure determination
Douglas, Shawn M., Chou, James J., Shih, William M.
Membrane proteins are encoded by 20–35% of genes but represent 15 kDa in size, Nuclear-Overhauser effect-derived distance restraints are difficult to obtain, and RDCs could serve as the main...
Rapid prototyping of 3D DNA-origami shapes with caDNAno
Douglas, Shawn M., Marblestone, Adam H., Teerapittayanon, Surat, Vazquez, Alejandro, Church, George M., Shih, William M.
DNA nanotechnology exploits the programmable specificity afforded by base-pairing to produce self-assembling macromolecular objects of custom shape. For building megadalton-scale DNA nanostructures,...