Incentive-Compatible Opportunistic Routing for Wireless Networks ABSTRACT (2009)
Fan Wu, Tingting Chen, Sheng Zhong, Li Erran, Li Yang, Richard Yang
User-contributed wireless mesh networks are a disruptive technology that may fundamentally change the economics of edge network access and bring the benefits of a computer network infrastructure to...
Body Sensor Network Security: An Identity-Based Cryptography Approach ABSTRACT (2009)
A body sensor network (BSN), is a network of sensors deployed on a person’s body, usually for health care monitoring. Since the sensors collect personal medical data, security and privacy are...
Towards a Theory of Robust Localization Against Malicious Beacon Nodes (2009)
Sheng Zhong, Murtuza Jadliwala, Shambhu Upadhyaya, Chunming Qiao
Abstract—Localization in the presence of malicious beacon nodes is an important problem in wireless networks. Although significant progress has been made on this problem, some fundamental...
Jan-hermen Dannenberg, Gregory David, Sheng Zhong, Wing H. Wong, Ronald A, ...
mSin3A corepressor regulates diverse transcriptional networks
Secure Distance-based Localization in the Presence of Cheating Beacon Nodes (2009)
Jadliwala, Murtuza, Zhong, Sheng, Upadhyaya, Shambhu, Qiao, Chunming, Hubaux, Jean-Pierre
Secure Distance-based Localization in the Presence of Cheating Beacon Nodes (2009)
Jadliwala, Murtuza, Zhong, Sheng, Upadhyaya, Shambhu, Qiao, Chunming, Hubaux, Jean-Pierre
Sheng Zhong, Li (erran Li, Yanbin Grace Liu, Yang Richard Yang
The functioning of many civilian ad-hoc networks depends on the assumption that nodes in the network forward each other’s traffic. However, because forwarding packets consumes scarce resources such...
ABSTRACT Body Sensor Network Security: An Identity-Based Cryptography Approach (2008)
A body sensor network (BSN), is a network of sensors deployed on a person’s body, usually for health care monitoring. Since the sensors collect personal medical data, security and privacy are...
Inferring gene regulatory networks by thermodynamic modeling (2008)
Chen, Chieh-Chun, Zhong, Sheng
Abstract Background To date, the reconstruction of gene regulatory networks from gene expression data has primarily relied on the correlation between the expression of transcription regulators and...
Huck-hui Ng, Sheng Zhong, Bing Lim
Stem cells are specialized progenitor cells that have the ability to develop into different somatic cell types in the body. Among the different stem cells, embryonic stem (ES) cells are considered...
Shi, Leming, Jones, Wendell D, Jensen, Roderick V, Harris, Stephen C, Perkins, Roger G, Goodsaid, Federico M, ...
Abstract Background Reproducibility is a fundamental requirement in scientific experiments. Some recent publications have claimed that microarrays are unreliable because lists of differentially...
IOS Press An Efficient and Secure Cryptosystem for Encrypting Long Messages (2008)
Abstract. Traditionally, due to efficiency considerations, when encrypting long messages using an asymmtric cryptosystem, one needs to use a symmetric cryptosystem in addition. To eliminate this...
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Zhiqiang Yang, Sheng Zhong, Rebecca N. Wright
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Distributed Data Mining Protocols for Privacy: A Review of Some Recent Results ⋆ (2008)
Rebecca N. Wright, Zhiqiang Yang, Sheng Zhong
Abstract. With the rapid advance of the Internet, a large amount of sensitive data is collected, stored, and processed by different parties. Data mining is a powerful tool that can extract knowledge...
Pengyu Hong, Sheng Zhong, Wing H. Wong
The Ubiquitous Bio-Information Computing (UBIC 2) project aims to disseminate protocols and software packages to facilitate the development of heterogeneous bio-information computing units that are...
Privacy-Preserving Queries on Encrypted Data ⋆ (2008)
Zhiqiang Yang, Sheng Zhong, Rebecca N. Wright
Abstract. Data confidentiality is a major concern in database systems. Encryption is a useful tool for protecting the confidentiality of sensitive data. However, when data is encrypted, performing...
Towards Privacy-Preserving Model Selection ⋆ (2008)
Zhiqiang Yang, Sheng Zhong, Rebecca N. Wright
Abstract. Model selection is an important problem in statistics, machine learning, and data mining. In this paper, we investigate the problem of enabling multiple parties to perform model selection...
In wireless ad hoc networks, routing requires cooperation of nodes. Since nodes often belong to different users, it is highly important to provide incentives for them to cooperate. However, most...
Pengyu Hong, Sheng Zhong, Wing H. Wong
The Ubiquitous Bio-Information Computing (UBIC 2) project aims to disseminate protocols and software packages to facilitate the development of heterogeneous bio-information computing units that are...
Chen, Chieh-Chun, Zhu, Xin-Guang, Zhong, Sheng
Abstract Background Transcription factors (TFs) have multiple combinatorial forms to regulate the transcription of a target gene. For example, one TF can help another TF to stabilize onto regulatory...
Towards a Theory of Data Entanglement ⋆ (Extended Abstract) (2008)
James Aspnes, Joan Feigenbaum, R Yampolskiy, Sheng Zhong
Abstract. We give a formal model for systems that store data in entangled form. We propose a new notion of entanglement, called all-ornothing integrity (AONI) that binds the users ’ data in a way...
Towards a Theory of Data Entanglement ⋆,⋆⋆ Abstract (2008)
James Aspnes, Joan Feigenbaum, R Yampolskiy, Sheng Zhong
We give a formal model for systems that store data in entangled form. We propose a new notion of entanglement, called all-or-nothing integrity (AONI) that binds the users ’ data in a way that makes...
Towards a Theory of Robust Localization against Malicious Beacon Nodes (2008)
Zhong, Sheng, Jadliwala, Murtuza, Upadhyaya, Shambhu, Qiao, Chunming
Localization in the presence of malicious beacon nodes is an important problem in wireless networks. Although significant progress has been made on this problem, some fundamental theoretical...
Research Inferring gene regulatory networks by thermodynamic modeling (2008)
Bmc Genomics, Chieh-chun Chen, Sheng Zhong
This is an open access article distributed under the terms of the Creative Commons Attribution License
Xie, Dan, Cai, Jun, Chia, Na-Yu, Ng, Huck H., Zhong, Sheng
We introduce the GibbsModule algorithm for de novo detection of cis-regulatory motifs and modules in eukaryote genomes. GibbsModule models the coexpressed genes within one species as sharing a core...
I have broad interest in cryptography, security, and networking, both theoretical and practical aspects thereof. I am also interested in incentive-compatible computing, i.e., computational problems...
Lu, Yue, He, Xin, Zhong, Sheng
OSCAR is a web platform for cluster and cross-species analysis of microarray data. It provides a comprehensive but friendly environment to both users and algorithm developers. For users, OSCAR...
The Reproducibility of Lists of Differentially Expressed Genes in Microarray Studies (2007)
Leming D. Shi, Wendell D. Jones, Roderick V. Jensen, Stephen C. Harris, Roger G. Perkins, Federico M. Goodsaid, ...
Reproducibility is a fundamental requirement in scientific experiments and clinical contexts. Recent publications raise concerns about the reliability of microarray technology because of the apparent...
The Reproducibility of Lists of Differentially Expressed Genes in Microarray Studies (2007)
Leming Shi, Wendell D. Jones, Roderick V. Jensen, Stephen C. Harris, Roger G. Perkins, Federico M. Goodsaid, ...
Reproducibility is a fundamental requirement in scientific experiments and clinical contexts. Recent publications raise concerns about the reliability of microarray technology because of the apparent...
Kim, Chulyun, Kim, Sangkyum, Dorer, Russell, Xie, Dan, Han, Jiawei, Zhong, Sheng
Abstract Background A nearly complete collection of gene-deletion mutants (96% of annotated open reading frames) of the yeast Saccharomyces cerevisiae has been systematically constructed. Tag...
LOCOMO: Distance-based Localization against Malicious Beacon Nodes (2007)
Zhong, Sheng, Jadliwala, Murtuza, Upadhyaya, Shambhu, Qiao, Chunming
Privacy-preserving algorithms for distributed mining of frequent itemsets (2007)
Standard algorithms for association rule mining are based on identification of frequent itemsets. In this paper, we study how to maintain privacy in distributed mining of frequent itemsets. That is,...
Privacy-preserving algorithms for distributed mining of frequent itemsets (2007)
Standard algorithms for association rule mining are based on identification of frequent itemsets. In this paper, we study how to maintain privacy in distributed mining of fre-quent itemsets. That is,...
Ai, Lingbao, Tao, Qian, Zhong, Sheng, Fields, C.Robert, Kim, Wan-Ju, Lee, Michael W., ...
The Wnt signaling pathway is a powerful and prominent oncogenic mechanism dysregulated in numerous cancer types. While evidence from transgenic mouse models and studies of human tumors clearly...
Ai, Lingbao, Tao, Qian, Zhong, Sheng, Fields, C. Robert, Kim, Wan-Ju, Lee, Michael W., ...
The Wnt signaling pathway is a powerful and prominent oncogenic mechanism dysregulated in numerous cancer types. While evidence from transgenic mouse models and studies of human tumors clearly...
Ai, Lingbao, Tao, Qian, Zhong, Sheng, Fields, C. Robert, Kim, Wan-Ju, Lee, Michael W., ...
The Wnt signaling pathway is a powerful and prominent oncogenic mechanism dysregulated in numerous cancer types. While evidence from transgenic mouse models and studies of human tumors clearly...
Privacy-Preserving Classification of Customer Data without Loss of Accuracy (2005)
Zhiqiang Yang, Sheng Zhong, Rebecca N. Wright
Privacy has become an increasingly important issue in data mining. In this paper, we consider a scenario in which a data miner surveys a large number of customers to learn classification rules on...
Anonymity-preserving data collection (2005)
Zhiqiang Yang, Sheng Zhong, Rebecca N. Wright
Protection of privacy has become an important problem in data mining. In particular, individuals have become increasingly unwilling to share their data, frequently resulting in individuals either...
Privacy-enhancing k-anonymization of customer data (2005)
In order to protect individuals ’ privacy, the technique of kanonymization has been proposed to de-associate sensitive attributes from the corresponding identifiers. In this paper, we provide...
Privacy-enhancing k-anonymization of customer data (2005)
In order to protect individuals ’ privacy, the technique of kanonymization has been proposed to de-associate sensitive attributes from the corresponding identifiers. In this paper, we provide...
Anonymity-preserving data collection (2005)
Zhiqiang Yang, Sheng Zhong, Rebecca N. Wright
Protection of privacy has become an important problem in data mining. In particular, individuals have become increasingly unwilling to share their data, frequently resulting in individuals either...
Computational and statistical approaches to study gene regulation and gene function / (2005)
"May 2005."
Dannenberg, Jan-Hermen, David, Gregory, Zhong, Sheng, Van Der Torre, Jaco, Wong, Wing H., DePinho, Ronald A.
mSin3A is a core component of a large multiprotein corepressor complex with associated histone deacetylase (HDAC) enzymatic activity. Physical interactions of mSin3A with many sequence-specific...
EU ANTI-DUMPING POLICY-A Study in the CTV Case (2004)
After integration for approximate half of century, EU, which compasses 25 Member State on 1st May, 2004, grows its influence on global economy day by day. There has been a significant increase of...
Thesis (Ph. D.)--Yale University, 2004.
Privacy-preserving locationbased services for mobile users in wireless networks (2004)
Sheng Zhong, Li (erran Li, Yanbin Grace Liu, Yang Richard Yang
Abstract — Mobility is key to personal freedom. With the increasing availability of mobile devices, many providers begin to offer location-based services. Although these services greatly enrich our...
In this dissertation, I study privacy, integrity, and incentive compatibility in com-putations with untrusted parties. The study of privacy and integrity belongs to the research area of secure...
Towards a Theory of Data Entanglement (2004)
Joan Feigenbaum, Aleksandr Yampolskiy, Sheng Zhong, James Aspnes, James Aspnes, Joan Feigenbaum Aleks, ...
We propose a formal model for data entanglement as used in storage systems like Dagster [25] and Tangler [26]. These systems split data into blocks in such a way that a single block becomes a part of...
Towards a Theory of Data Entanglement (2004)
Exte Nd Ed, James Aspnes, Joan Feigenbaum, R Yampolskiy, Sheng Zhong
We give a formal model for systems that store data in entangled form. We propose a new notion of entanglement, called all-or-nothing integrity (AONI) that binds the users' data in a way that...
James Aspnes, Joan Feigenbaum, Aleksandr Yampolskiy, Sheng Zhong
aleksandr.yampolskiy@yale.edu. Supported by NSF.
Sheng Zhong, Lu Tian, Cheng Li, Kai-florian Storch, Wing H. Wong
The Gene Ontology (GO) resource can be used as a powerful tool to uncover the properties shared among, and specific to, a list of genes produced by high-throughput functional genomics studies, such...
Towards a Theory of Data Entanglement (2004)
James Aspnes, Joan Feigenbaum, Aleksandr Yampolskiy, Sheng Zhong
We propose a formal model for data entanglement as used in storage systems like Dagster [25] and Tangler [26]. These systems split data into blocks in such a way that a single block becomes a part of...
Zhong, Sheng, Li, Cheng, Wong, Wing Hung
To date, assembling comprehensive annotation information for all probe sets of any Affymetrix microarrays remains a time-consuming, error-prone and challenging task. ChipInfo is designed for...
Verifiable distributed oblivious transfer and mobile agent security. DialM-POMC 2003 (2003)
The mobile agent is a fundamental building block of the mobile computing paradigm. In mobile agent security, oblivious transfer (OT) from a trusted party can be used to protect the agent’s privacy...
Sprite: A Simple, Cheat-Proof, Credit-Based System for Mobile Ad-Hoc Networks (2003)
Abstract — Mobile ad hoc networking has been an active research area for several years. How to stimulate cooperation among selfish mobile nodes, however, is not well addressed yet. In this paper,...
Sprite: A Simple, Cheat-Proof, Credit-Based System for Mobile Ad-Hoc Networks (2003)
Abstract — Mobile ad hoc networking has been an active research area for several years. How to stimulate cooperation among selfish mobile nodes, however, is not well addressed yet. In this paper,...
Verifiable distributed oblivious transfer and mobile agent security. DialM-POMC 2003 (2003)
Sheng Zhong, Yang Richard Yang
The mobile agent is a fundamental building block of the mobile computing paradigm. In mobile agent security, oblivioustransfer(OT)fromatrustedpartycanbeusedtoprotect the agent’s privacy and the...
Verifiable distributed oblivious transfer and mobile agent security. DialM-POMC 2003 (2003)
Sheng Zhong, Yang Richard Yang
The mobile agent is a fundamental building block of the mobile computing paradigm. In mobile agent security, oblivious transfer (OT) from a trusted party can be used to protect the agent’s privacy...
Zhong, Sheng, Li, Cheng, Wong, Wing Hung
To date, assembling comprehensive annotation information for all probe sets of any Affymetrix microarrays remains a time-consuming, error-prone and challenging task. ChipInfo is designed for...
Optimistic mixing for exit-polls (2002)
Sheng Zhong, Dan Boneh, Markus Jakobsson, Ari Juels
Abstract. We propose a new mix network that is optimized to produce a correct output very fast when all mix servers execute the mixing protocol correctly (the usual case). Our mix network only...
Optimistic Mixing for Exit-Polls (2002)
Philippe Golle Sheng, Sheng Zhong, Dan Boneh, Markus Jakobsson, Ari Juels
We propose a new mix network that is optimized to produce a correct output very fast when all mix servers execute the mixing protocol correctly (the usual case). Our mix network only produces an...
Nanostructured Copper Filaments in Electrochemical Deposition (2001)
Peng, Ru-Wen, Wang, Mu, Yin, Xiao-Bo, Zhong, Sheng, Zhu, Jian-Ming
Thesis (Ph. D.)--Chinese University of Hong Kong, 1996.
Adaptive hierarchical vector quantization for image coding (1994)
Sheng Zhong, Francis Chin, Qing Yun Shi
Vector quantization (VQ) techniques have been widely used in the area of image coding because of their ability to achieve a low bit rate. ' VQ techniques achieve a low bit rate by exploiting the...
Zhong, Sheng, Li, Cheng, Wong, Wing Hung
To date, assembling comprehensive annotation information for all probe sets of any Affymetrix microarrays remains a time-consuming, error-prone and challenging task. ChipInfo is designed for...
Dannenberg, Jan-Hermen, David, Gregory, Zhong, Sheng, Van Der Torre, Jaco, Wong, Wing H., DePinho, Ronald A.
mSin3A is a core component of a large multiprotein corepressor complex with associated histone deacetylase (HDAC) enzymatic activity. Physical interactions of mSin3A with many sequence-specific...
Reliable prediction of transcription factor binding sites by phylogenetic verification
Li, Xiaoman, Zhong, Sheng, Wong, Wing H.
We present a statistical methodology that largely improves the accuracy in computational predictions of transcription factor (TF) binding sites in eukaryote genomes. This method models the...
Zhong, Sheng, Li, Cheng, Wong, Wing Hung
To date, assembling comprehensive annotation information for all probe sets of any Affymetrix microarrays remains a time-consuming, error-prone and challenging task. ChipInfo is designed for...
Dannenberg, Jan-Hermen, David, Gregory, Zhong, Sheng, Van Der Torre, Jaco, Wong, Wing H., DePinho, Ronald A.
mSin3A is a core component of a large multiprotein corepressor complex with associated histone deacetylase (HDAC) enzymatic activity. Physical interactions of mSin3A with many sequence-specific...
Reliable prediction of transcription factor binding sites by phylogenetic verification
Li, Xiaoman, Zhong, Sheng, Wong, Wing H.
We present a statistical methodology that largely improves the accuracy in computational predictions of transcription factor (TF) binding sites in eukaryote genomes. This method models the...
TagSmart: analysis and visualization for yeast mutant fitness data measured by tag microarrays
Kim, Chulyun, Kim, Sangkyum, Dorer, Russell, Xie, Dan, Han, Jiawei, Zhong, Sheng
Lu, Yue, He, Xin, Zhong, Sheng
OSCAR is a web platform for cluster and cross-species analysis of microarray data. It provides a comprehensive but friendly environment to both users and algorithm developers. For users, OSCAR...
Shi, Leming, Jones, Wendell D, Jensen, Roderick V, Harris, Stephen C, Perkins, Roger G, Goodsaid, Federico M, ...
Xie, Dan, Cai, Jun, Chia, Na-Yu, Ng, Huck H., Zhong, Sheng
We introduce the GibbsModule algorithm for de novo detection of cis-regulatory motifs and modules in eukaryote genomes. GibbsModule models the coexpressed genes within one species as sharing a core...