Shulamit Michaeli

Publication List Details

Period

2007 - 2007

Number

20

Co-Authors

RNAspa: a shortest path approach for comparative prediction of the secondary structure of ncRNA molecules (2007)

Horesh, Yair, Doniger, Tirza, Michaeli, Shulamit, Unger, Ron

Abstract Background In recent years, RNA molecules that are not translated into proteins (ncRNAs) have drawn a great deal of attention, as they were shown to be involved in many cellular functions....

The U5 RNA of trypanosomes deviates from the canonical U5 RNA: The Leptomonas collosoma U5 RNA and its coding gene

Xu, Yu-xin, Ben-Shlomo, Herzel, Michaeli, Shulamit

Fractionation of the abundant small ribonucleoproteins (RNPs) of the trypanosomatid Leptomonas collosoma revealed the existence of a group of unidentified small RNPs that were shown to fractionate...

Small nucleolar RNA interference induced by antisense or double-stranded RNA in trypanosomatids

Liang, Xue-hai, Liu, Qing, Michaeli, Shulamit

In trypanosomes the C/D- and H/ACA-like small nucleolar RNAs (snoRNAs) are clustered and repeated in the genome. The snoRNAs studied to date are transcribed as polycistronic transcripts by RNA...

Scanning electron microscopy of cells and tissues under fully hydrated conditions

Thiberge, Stephan, Nechushtan, Amotz, Sprinzak, David, Gileadi, Opher, Behar, Vered, Zik, Ory, ...

A capability for scanning electron microscopy of wet biological specimens is presented. A membrane that is transparent to electrons protects the fully hydrated sample from the vacuum. The result is a...

The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA.

Liang, Xue-Hai, Xu, Yu-Xin, Michaeli, Shulamit

The spliced leader-associated (SLA1) RNA is a trypanosome-specific small RNA with unknown function. SLA1 carries a Sm-like site, and is associated with core Sm proteins. Here we found that SLA1...

A genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Trypanosoma brucei reveals a trypanosome-specific pattern of rRNA modification

LIANG, XUE-HAI, ULIEL, SHAI, HURY, AVRAHAM, BARTH, SARIT, DONIGER, TIRZA, UNGER, RON, ...

Small nucleolar RNAs (snoRNAs) constitute newly discovered noncoding small RNAs, most of which function in guiding modifications such as 2′-O-ribose methylation and pseudouridylation on rRNAs and...

The U5 RNA of trypanosomes deviates from the canonical U5 RNA: The Leptomonas collosoma U5 RNA and its coding gene

Xu, Yu-xin, Ben-Shlomo, Herzel, Michaeli, Shulamit

Fractionation of the abundant small ribonucleoproteins (RNPs) of the trypanosomatid Leptomonas collosoma revealed the existence of a group of unidentified small RNPs that were shown to fractionate...

Small nucleolar RNA interference induced by antisense or double-stranded RNA in trypanosomatids

Liang, Xue-hai, Liu, Qing, Michaeli, Shulamit

In trypanosomes the C/D- and H/ACA-like small nucleolar RNAs (snoRNAs) are clustered and repeated in the genome. The snoRNAs studied to date are transcribed as polycistronic transcripts by RNA...

Scanning electron microscopy of cells and tissues under fully hydrated conditions

Thiberge, Stephan, Nechushtan, Amotz, Sprinzak, David, Gileadi, Opher, Behar, Vered, Zik, Ory, ...

A capability for scanning electron microscopy of wet biological specimens is presented. A membrane that is transparent to electrons protects the fully hydrated sample from the vacuum. The result is a...

The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA.

Liang, Xue-Hai, Xu, Yu-Xin, Michaeli, Shulamit

The spliced leader-associated (SLA1) RNA is a trypanosome-specific small RNA with unknown function. SLA1 carries a Sm-like site, and is associated with core Sm proteins. Here we found that SLA1...

A genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Trypanosoma brucei reveals a trypanosome-specific pattern of rRNA modification

LIANG, XUE-HAI, ULIEL, SHAI, HURY, AVRAHAM, BARTH, SARIT, DONIGER, TIRZA, UNGER, RON, ...

Small nucleolar RNAs (snoRNAs) constitute newly discovered noncoding small RNAs, most of which function in guiding modifications such as 2′-O-ribose methylation and pseudouridylation on rRNAs and...

Identification of novel snRNA-specific Sm proteins that bind selectively to U2 and U4 snRNAs in Trypanosoma brucei

Tkacz, Itai Dov, Lustig, Yaniv, Stern, Michael Zeev, Biton, Moshe, Salmon-Divon, Mali, Das, Anish, ...

In eukaryotes the seven Sm core proteins bind to U1, U2, U4, and U5 snRNAs. In Trypanosoma brucei, Sm proteins have been implicated in binding both spliced leader (SL) and U snRNAs. In this study, we...

Genome-Wide Analysis of C/D and H/ACA-Like Small Nucleolar RNAs in Leishmania major Indicates Conservation among Trypanosomatids in the Repertoire and in Their rRNA Targets▿ †

Liang, Xue-hai, Hury, Avraham, Hoze, Ehud, Uliel, Shai, Myslyuk, Inna, Apatoff, Avihay, ...

Small nucleolar RNAs (snoRNAs) are a large group of noncoding RNAs that exist in eukaryotes and archaea and guide modifications such as 2′-O-ribose methylations and pseudouridylation on rRNAs and...

Down-Regulation of the Trypanosomatid Signal Recognition Particle Affects the Biogenesis of Polytopic Membrane Proteins but Not of Signal Peptide-Containing Proteins▿

Lustig, Yaniv, Vagima, Yaron, Goldshmidt, Hanoch, Erlanger, Avigail, Ozeri, Vered, Vince, James, ...

Protein translocation across the endoplasmic reticulum is mediated by the signal recognition particle (SRP). In this study, the SRP pathway in trypanosomatids was down-regulated by two approaches:...

Spliced-leader RNA silencing: a novel stress-induced mechanism in Trypanosoma brucei

Lustig, Yaniv, Sheiner, Lilach, Vagima, Yaron, Goldshmidt, Hanoch, Das, Anish, Bellofatto, Vivian, ...

The signal-recognition particle (SRP) mediates the translocation of membrane and secretory proteins across the endoplasmic reticulum upon interaction with the SRP receptor. In trypanosomes, the main...

Elucidating the Role of C/D snoRNA in rRNA Processing and Modification in Trypanosoma brucei▿ †

Barth, Sarit, Shalem, Boaz, Hury, Avraham, Tkacz, Itai Dov, Liang, Xue-hai, Uliel, Shai, ...

Most eukaryotic C/D small nucleolar RNAs (snoRNAs) guide 2′-O methylation (Nm) on rRNA and are also involved in rRNA processing. The four core proteins that bind C/D snoRNA in Trypanosoma brucei...