Willard S. Willard, Rui Mao, Wenguo Liu, Weijia Xu, Shulin Ni, Daniel P. Miranker
mSQL is an extended SQL query language targeting the expanding area of biological sequence databases and sequence analysis methods. The core aspects include first-class data types for biological...
Daniel P. Miranker, Willard J. Briggs, Rui Mao, Shulin Ni, Weijia Xu, Arthur Kaufmann, ...
The Bulletin of the Technical Committee on Data Engineering is published quarterly and is distributed to all TC members. Its scope includes the design, implementation, modelling, theory and...
Morgan, Xochitl C, Ni, Shulin, Miranker, Daniel P, Iyer, Vishwanath R
Abstract Background Cis-acting transcriptional regulatory elements in mammalian genomes typically contain specific combinations of binding sites for various transcription factors. Although some...
BMC Bioinformatics BioMed Central (2007)
Xochitl C Morgan, Shulin Ni, Daniel P Miranker, Vishwanath R Iyer, Vishwanath R Iyer
Research article Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining
Biosequence use cases in mobios sql (2004)
Daniel P. Miranker, Willard J Briggs, Rui Mao, Shulin Ni, Weijia Xu
The sequencing and annotation of entire genomes has enriched the content of biological sequence databases such that new methods of sequence analysis, comparison and retrieval are being invented and...