Conformational Angles Database (CADB-3.0) (2007)
Gopalakrishnan, K, Sheik, SS, Ranjani, Vasuki C, Udayakumar, A, Sekar, K
Transitions in amino-acid conformation angles tend to accompany various structural modifications in protein structures. Thus, to benefit the modeling of protein structures, the Conformation Angles...
Ramachandran Plot on The Web (2.0) (2007)
Gopalakrishnan, K, Sowmiya, G, Sheik, SS, Sekar, K
The Ramachandran plot displays the main chain conformation angles (\Phi and \Psi) of the polypeptide chain of a protein molecule. The paper reports the updated version of the Ramachandran plot web...
Ramachandran Plot on The Web (2.0) (2007)
Gopalakrishnan, K, Sowmiya, G, Sheik, SS, Sekar, K
The Ramachandran plot displays the main chain conformation angles (\Phi and \Psi) of the polypeptide chain of a protein molecule. The paper reports the updated version of the Ramachandran plot web...
Analysis of string-searching algorithms on biological sequence databases (2005)
Sheik, SS, Aggarwal, Sumit K, Poddar, A, Sathiyabhama, B, Balakrishna, N, Sekar, K
String-searching algorithms are used to find the occurrences of a search string in a given text. The advent of digital computers has stimulated the development of string-searching algorithms for...
CADB-2.0: Conformation Angles Database (2005)
Mohan, Samaya K, Sheik, SS, Ramesh, J, Balamurugan, B, Jeyasimhan, M, Mayilarasi, C, ...
The Conformation Angles Data Base (CADB) is a comprehensive,authoritative and timely knowledge base with a powerful query engine developed to facilitate the retrieval of information related to the...
CADB-2.0: Conformation Angles Database (2005)
Mohan, Samaya K, Sheik, SS, Ramesh, J, Balamurugan, B, Jeyasimhan, M, Mayilarasi, C, ...
The Conformation Angles Data Base (CADB) is a comprehensive,authoritative and timely knowledge base with a powerful query engine developed to facilitate the retrieval of information related to the...
Analysis of string-searching algorithms on biological sequence databases (2005)
Sheik, SS, Aggarwal, Sumit K, Poddar, A, Sathiyabhama, B, Balakrishna, N, Sekar, K
String-searching algorithms are used to find the occurrences of a search string in a given text. The advent of digital computers has stimulated the development of string-searching algorithms for...
A FAST Pattern Matching Algorithm (2004)
Sheik, SS, Aggarwal, Sumit K, Poddar, Anindya, Balakrishnan, N, Sekar, K
The advent of digital computers has made the routine use of pattern-matching possible in various applications.This has also stimulated the development of many algorithms. In this paper, we propose a...
A FAST Pattern Matching Algorithm (2004)
Sheik, SS, Aggarwal, Sumit K, Poddar, Anindya, Balakrishnan, N, Sekar, K
The advent of digital computers has made the routine use of pattern-matching possible in various applications.This has also stimulated the development of many algorithms. In this paper, we propose a...
Side-chain conformation angles of amino acids: effect of temperature factor cut-off (2003)
Bhargavi, Ramya G, Sheik, SS, Velmurugan, D, Sekar, K
The paper presents the analysis of the side-chain conformation angles of amino acids in 90% non-identical protein structures. The analysis has been carried out using 113,699 residues, which is higher...
Hussain, ASZ, Kumar, Kiran Ch, Rajesh, CK, Sheik, SS, Sekar, K
SEM, Symmetry Equivalent Molecules, is a web-based graphical user interface to generate and visualize the symmetry equivalent molecules (proteins and nucleic acids). In addition, the program allows...
CADB: Conformation Angles DataBase of proteins (2003)
Sheik, SS, Ananthalakshmi, P, Bhargavi, GR, Sekar, K
Conformation Angles DataBase (CADB) provides an online resource to access data on conformation angles (both main-chain and side-chain) of protein structures in two data sets corresponding to 25% and...
Side-chain conformation angles of amino acids: effect of temperature factor cut-off (2003)
Bhargavi, Ramya G, Sheik, SS, Velmurugan, D, Sekar, K
The paper presents the analysis of the side-chain conformation angles of amino acids in 90% non-identical protein structures. The analysis has been carried out using 113,699 residues, which is higher...
Hussain, ASZ, Kumar, Kiran Ch, Rajesh, CK, Sheik, SS, Sekar, K
SEM, Symmetry Equivalent Molecules, is a web-based graphical user interface to generate and visualize the symmetry equivalent molecules (proteins and nucleic acids). In addition, the program allows...