Bagos, Pantelis G, Liakopoulos, Theodore D, Hamodrakas, Stavros J
Abstract Background Hidden Markov Models (HMMs) have been extensively used in computational molecular biology, for modelling protein and nucleic acid sequences. In many applications, such as...
N-terminal sequence-based prediction of subcellular location (2005)
Petsalakis, Evangelia I, Bagos, Pantelis G, Litou, Zoi I, Hamodrakas, Stavros J
No abstract available.
Sgourakis, Nikolaos G, Bagos, Pantelis G, Papasaikas, Panagiotis K, Hamodrakas, Stavros J
Abstract Background G- Protein coupled receptors (GPCRs) comprise the largest group of eukaryotic cell surface receptors with great pharmacological interest. A broad range of native ligands interact...
Bagos, Pantelis G, Liakopoulos, Theodore D, Hamodrakas, Stavros J
Abstract Background Prediction of the transmembrane strands and topology of β-barrel outer membrane proteins is of interest in current bioinformatics research. Several methods have been applied so...
A database for G proteins and their interaction with GPCRs (2004)
Elefsinioti, Antigoni L, Bagos, Pantelis G, Spyropoulos, Ioannis C, Hamodrakas, Stavros J
Abstract Background G protein-coupled receptors (GPCRs) transduce signals from extracellular space into the cell, through their interaction with G proteins, which act as switches forming...
cuticleDB: a relational database of Arthropod cuticular proteins (2004)
Magkrioti, Christiana K, Spyropoulos, Ioannis C, Iconomidou, Vassiliki A, Willis, Judith H, Hamodrakas, Stavros J
Abstract Background The insect exoskeleton or cuticle is a bi-partite composite of proteins and chitin that provides protective, skeletal and structural functions. Little information is available...
Bagos, Pantelis G, Liakopoulos, Theodore D, Spyropoulos, Ioannis C, Hamodrakas, Stavros J
Abstract Background Integral membrane proteins constitute about 20–30% of all proteins in the fully sequenced genomes. They come in two structural classes, the α-helical and the β-barrel membrane...
GeneViTo: Visualizing gene-product functional and structural features in genomic datasets (2003)
Vernikos, Georgios S, Gkogkas, Christos G, Promponas, Vasilis J, Hamodrakas, Stavros J
Abstract Background The availability of increasing amounts of sequence data from completely sequenced genomes boosts the development of new computational methods for automated genome annotation and...
GeneViTo: Visualizing gene-product functional and structural features in genomic datasets
Vernikos, Georgios S, Gkogkas, Christos G, Promponas, Vasilis J, Hamodrakas, Stavros J
PRED-TMBB: a web server for predicting the topology of β-barrel outer membrane proteins
Bagos, Pantelis G., Liakopoulos, Theodore D., Spyropoulos, Ioannis C., Hamodrakas, Stavros J.
The β-barrel outer membrane proteins constitute one of the two known structural classes of membrane proteins. Whereas there are several different web-based predictors for α-helical membrane...
cuticleDB: a relational database of Arthropod cuticular proteins
Magkrioti, Christiana K, Spyropoulos, Ioannis C, Iconomidou, Vassiliki A, Willis, Judith H, Hamodrakas, Stavros J
A database for G proteins and their interaction with GPCRs
Elefsinioti, Antigoni L, Bagos, Pantelis G, Spyropoulos, Ioannis C, Hamodrakas, Stavros J
GeneViTo: Visualizing gene-product functional and structural features in genomic datasets
Vernikos, Georgios S, Gkogkas, Christos G, Promponas, Vasilis J, Hamodrakas, Stavros J
PRED-TMBB: a web server for predicting the topology of β-barrel outer membrane proteins
Bagos, Pantelis G., Liakopoulos, Theodore D., Spyropoulos, Ioannis C., Hamodrakas, Stavros J.
The β-barrel outer membrane proteins constitute one of the two known structural classes of membrane proteins. Whereas there are several different web-based predictors for α-helical membrane...
cuticleDB: a relational database of Arthropod cuticular proteins
Magkrioti, Christiana K, Spyropoulos, Ioannis C, Iconomidou, Vassiliki A, Willis, Judith H, Hamodrakas, Stavros J
A database for G proteins and their interaction with GPCRs
Elefsinioti, Antigoni L, Bagos, Pantelis G, Spyropoulos, Ioannis C, Hamodrakas, Stavros J